Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3563

Experiment: A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.01 mg/ml
3,690,451	-		Ga0059261_3562	0.50	+0.4
3,690,465	+				+1.1
3,690,465	+		Ga0059261_3562	0.51	+0.1
3,690,465	+		Ga0059261_3562	0.51	+0.2
3,690,466	-		Ga0059261_3562	0.51	-0.4
3,690,466	-		Ga0059261_3562	0.51	+1.1
3,690,878	+		Ga0059261_3562	0.86	-0.1
3,690,879	-		Ga0059261_3562	0.86	+0.5
3,690,879	-		Ga0059261_3562	0.86	+0.8
3,691,060	+				-0.3
3,691,060	+				-0.1
3,691,060	+				+0.2
3,691,060	+				-1.8
3,691,060	+				-0.5
3,691,060	+				+0.3
3,691,060	+				+0.1
3,691,061	-				+0.5
3,691,061	-				-0.6
3,691,061	-				+0.2
3,691,061	-				-0.2
3,691,075	+				-0.4
3,691,076	-				-0.2
3,691,087	-				-1.2
3,691,087	-				-0.0
3,691,087	-				+0.8
3,691,279	+		Ga0059261_3563	0.46	-0.2
3,691,279	+		Ga0059261_3563	0.46	-0.9
3,691,279	+		Ga0059261_3563	0.46	-0.9
3,691,279	+		Ga0059261_3563	0.46	+0.1
3,691,280	-		Ga0059261_3563	0.46	+0.2
3,691,280	-		Ga0059261_3563	0.46	-0.5
3,691,280	-		Ga0059261_3563	0.46	-1.2
3,691,280	-		Ga0059261_3563	0.46	+0.3
3,691,280	-		Ga0059261_3563	0.46	+0.1
3,691,280	-		Ga0059261_3563	0.46	+0.1
3,691,282	+		Ga0059261_3563	0.47	-1.0
3,691,283	-		Ga0059261_3563	0.47	+0.8
3,691,283	-		Ga0059261_3563	0.47	-0.3
3,691,304	-		Ga0059261_3563	0.52	+0.5
3,691,339	+		Ga0059261_3563	0.62	-0.4
3,691,340	-		Ga0059261_3563	0.62	-1.5
3,691,354	+		Ga0059261_3563	0.66	-0.1
3,691,355	-		Ga0059261_3563	0.66	-1.0
3,691,355	-		Ga0059261_3563	0.66	-0.2
3,691,355	-		Ga0059261_3563	0.66	-0.1
3,691,355	-		Ga0059261_3563	0.66	+1.1
3,691,355	-		Ga0059261_3563	0.66	-0.3
3,691,357	+		Ga0059261_3563	0.66	-0.2
3,691,357	+		Ga0059261_3563	0.66	+0.5
3,691,357	+		Ga0059261_3563	0.66	+1.1
3,691,357	+		Ga0059261_3563	0.66	-0.3
3,691,358	-		Ga0059261_3563	0.67	-0.1
3,691,358	-		Ga0059261_3563	0.67	-0.1
3,691,358	-		Ga0059261_3563	0.67	-0.1
3,691,358	-		Ga0059261_3563	0.67	+0.8
3,691,358	-		Ga0059261_3563	0.67	+1.2
3,691,358	-		Ga0059261_3563	0.67	+0.1
3,691,375	+		Ga0059261_3563	0.71	+1.4
3,691,375	+		Ga0059261_3563	0.71	+0.2
3,691,376	-		Ga0059261_3563	0.71	+0.7
3,691,385	+		Ga0059261_3563	0.74	+0.4
3,691,385	+		Ga0059261_3563	0.74	+0.4
3,691,385	+		Ga0059261_3563	0.74	+0.3
3,691,386	-		Ga0059261_3563	0.74	+0.7
3,691,386	-		Ga0059261_3563	0.74	+0.2
3,691,393	+		Ga0059261_3563	0.76	-1.3
3,691,393	+				+1.1
3,691,394	-		Ga0059261_3563	0.76	+1.1
3,691,409	-		Ga0059261_3563	0.80	+0.2
3,691,409	-		Ga0059261_3563	0.80	+0.6
3,691,420	+		Ga0059261_3563	0.83	+0.2
3,691,420	+		Ga0059261_3563	0.83	-0.1
3,691,421	-		Ga0059261_3563	0.83	-0.1
3,691,421	-		Ga0059261_3563	0.83	-0.0
3,691,421	-		Ga0059261_3563	0.83	+0.5
3,691,695	+				-0.5
3,691,763	+				+0.7
3,691,797	-				-1.1
3,691,899	+				-0.6
3,691,899	+				-0.5
3,691,899	+				+0.1
3,691,899	+				+0.9
3,691,899	+				+0.7
3,691,900	-				-0.3
3,691,900	-				+2.1
3,691,908	+				-0.2
3,691,922	+				+0.3
3,691,922	+				+0.7
3,691,923	-				-1.3
3,691,923	-				-0.5
3,691,923	-				-0.5
3,691,976	+				-0.7
3,691,976	+				-0.4
3,691,976	+				+1.1
3,691,977	-				-0.0
3,691,977	-				+0.9
3,692,076	+		Ga0059261_3564	0.16	-0.7
3,692,076	+		Ga0059261_3564	0.16	-0.3
3,692,151	+		Ga0059261_3564	0.33	+0.8
3,692,151	+		Ga0059261_3564	0.33	+0.6
3,692,151	+		Ga0059261_3564	0.33	+1.4
3,692,152	-		Ga0059261_3564	0.33	+0.2
3,692,152	-		Ga0059261_3564	0.33	-1.2
3,692,152	-		Ga0059261_3564	0.33	+0.8
3,692,152	-		Ga0059261_3564	0.33	-1.5
3,692,307	+		Ga0059261_3564	0.67	-1.0
3,692,307	+		Ga0059261_3564	0.67	-0.5
3,692,320	+		Ga0059261_3564	0.70	+0.3
3,692,320	+		Ga0059261_3564	0.70	-0.9
3,692,320	+		Ga0059261_3564	0.70	+0.1
3,692,320	+		Ga0059261_3564	0.70	-1.2
3,692,321	-		Ga0059261_3564	0.70	+0.7
3,692,321	-		Ga0059261_3564	0.70	+0.5
3,692,321	-		Ga0059261_3564	0.70	+0.0
3,692,321	-		Ga0059261_3564	0.70	+0.2
3,692,321	-		Ga0059261_3564	0.70	+0.4
3,692,321	-		Ga0059261_3564	0.70	-0.7