Experiment: A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0658 and Ga0059261_0659 are separated by 4 nucleotides Ga0059261_0659 and Ga0059261_0660 are separated by 28 nucleotides Ga0059261_0660 and Ga0059261_0661 are separated by 16 nucleotides Ga0059261_0661 and Ga0059261_0662 are separated by 89 nucleotides Ga0059261_0662 and Ga0059261_0663 overlap by 4 nucleotides
Ga0059261_0658: Ga0059261_0658 - Beta-lactamase class C and other penicillin binding proteins, at 698,579 to 699,859
_0658
Ga0059261_0659: Ga0059261_0659 - transcriptional regulator, HxlR family, at 699,864 to 700,310
_0659
Ga0059261_0660: Ga0059261_0660 - Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein), at 700,339 to 701,100
_0660
Ga0059261_0661: Ga0059261_0661 - hypothetical protein, at 701,117 to 701,263
_0661
Ga0059261_0662: Ga0059261_0662 - Truncated hemoglobins, at 701,353 to 701,769
_0662
Ga0059261_0663: Ga0059261_0663 - Prokaryotic homologs of the JAB domain, at 701,766 to 702,068
_0663
Position (kb) 700
701
702 Strain fitness (log2 ratio) -1
0
1 at 699.360 kb on - strand, within Ga0059261_0658 at 699.360 kb on - strand, within Ga0059261_0658 at 699.360 kb on - strand, within Ga0059261_0658 at 699.360 kb on - strand, within Ga0059261_0658 at 699.360 kb on - strand, within Ga0059261_0658 at 699.360 kb on - strand, within Ga0059261_0658 at 699.360 kb on - strand, within Ga0059261_0658 at 699.360 kb on - strand, within Ga0059261_0658 at 699.360 kb on - strand, within Ga0059261_0658 at 699.360 kb on - strand, within Ga0059261_0658 at 699.360 kb on - strand, within Ga0059261_0658 at 699.360 kb on - strand, within Ga0059261_0658 at 699.476 kb on + strand, within Ga0059261_0658 at 699.476 kb on + strand, within Ga0059261_0658 at 699.476 kb on + strand, within Ga0059261_0658 at 699.476 kb on + strand, within Ga0059261_0658 at 699.476 kb on + strand, within Ga0059261_0658 at 699.476 kb on + strand, within Ga0059261_0658 at 699.476 kb on + strand, within Ga0059261_0658 at 699.477 kb on - strand, within Ga0059261_0658 at 699.477 kb on - strand, within Ga0059261_0658 at 699.477 kb on - strand, within Ga0059261_0658 at 699.477 kb on - strand, within Ga0059261_0658 at 699.529 kb on + strand, within Ga0059261_0658 at 699.529 kb on + strand, within Ga0059261_0658 at 699.529 kb on + strand, within Ga0059261_0658 at 699.585 kb on + strand, within Ga0059261_0658 at 699.824 kb on + strand at 699.824 kb on + strand at 699.825 kb on - strand at 699.825 kb on - strand at 699.825 kb on - strand at 699.825 kb on - strand at 699.836 kb on + strand at 699.836 kb on + strand at 699.836 kb on + strand at 699.836 kb on + strand at 699.836 kb on + strand at 700.163 kb on + strand, within Ga0059261_0659 at 700.164 kb on - strand, within Ga0059261_0659 at 700.205 kb on + strand, within Ga0059261_0659 at 700.244 kb on + strand, within Ga0059261_0659 at 700.245 kb on - strand, within Ga0059261_0659 at 700.263 kb on - strand, within Ga0059261_0659 at 700.264 kb on + strand, within Ga0059261_0659 at 700.615 kb on + strand, within Ga0059261_0660 at 700.789 kb on + strand, within Ga0059261_0660 at 700.789 kb on + strand, within Ga0059261_0660 at 700.789 kb on + strand, within Ga0059261_0660 at 700.790 kb on - strand, within Ga0059261_0660 at 700.790 kb on - strand, within Ga0059261_0660 at 700.819 kb on + strand, within Ga0059261_0660 at 700.819 kb on + strand, within Ga0059261_0660 at 700.819 kb on + strand, within Ga0059261_0660 at 700.819 kb on + strand, within Ga0059261_0660 at 700.820 kb on - strand at 700.820 kb on - strand, within Ga0059261_0660 at 700.820 kb on - strand, within Ga0059261_0660 at 700.820 kb on - strand, within Ga0059261_0660 at 700.886 kb on + strand, within Ga0059261_0660 at 700.886 kb on + strand, within Ga0059261_0660 at 700.887 kb on - strand, within Ga0059261_0660 at 701.279 kb on - strand at 701.279 kb on - strand at 701.279 kb on - strand at 701.291 kb on - strand at 701.350 kb on + strand at 701.350 kb on + strand at 701.350 kb on + strand at 701.350 kb on + strand at 701.350 kb on + strand at 701.350 kb on + strand at 701.350 kb on + strand at 701.350 kb on + strand at 701.350 kb on + strand at 701.350 kb on + strand at 701.351 kb on - strand at 701.351 kb on - strand at 701.351 kb on - strand at 701.351 kb on - strand at 701.351 kb on - strand at 701.351 kb on - strand at 701.351 kb on - strand at 701.351 kb on - strand at 701.351 kb on - strand at 701.361 kb on + strand at 701.361 kb on + strand at 701.361 kb on + strand at 701.362 kb on - strand at 701.362 kb on - strand at 701.362 kb on - strand at 701.434 kb on + strand, within Ga0059261_0662 at 701.435 kb on - strand, within Ga0059261_0662 at 701.435 kb on - strand, within Ga0059261_0662 at 701.435 kb on - strand, within Ga0059261_0662 at 701.557 kb on + strand, within Ga0059261_0662 at 701.557 kb on + strand, within Ga0059261_0662 at 701.557 kb on + strand, within Ga0059261_0662 at 701.767 kb on + strand at 701.768 kb on - strand at 701.768 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.01 mg/ml remove 699,360 - Ga0059261_0658 0.61 +1.1 699,360 - Ga0059261_0658 0.61 -0.1 699,360 - Ga0059261_0658 0.61 -0.1 699,360 - Ga0059261_0658 0.61 -0.3 699,360 - Ga0059261_0658 0.61 +0.6 699,360 - Ga0059261_0658 0.61 +0.0 699,360 - Ga0059261_0658 0.61 -0.6 699,360 - Ga0059261_0658 0.61 -0.1 699,360 - Ga0059261_0658 0.61 -0.2 699,360 - Ga0059261_0658 0.61 +0.2 699,360 - Ga0059261_0658 0.61 +0.0 699,360 - Ga0059261_0658 0.61 +0.4 699,476 + Ga0059261_0658 0.70 +0.4 699,476 + Ga0059261_0658 0.70 +0.1 699,476 + Ga0059261_0658 0.70 -0.6 699,476 + Ga0059261_0658 0.70 +0.6 699,476 + Ga0059261_0658 0.70 -0.2 699,476 + Ga0059261_0658 0.70 -0.6 699,476 + Ga0059261_0658 0.70 -1.0 699,477 - Ga0059261_0658 0.70 +0.1 699,477 - Ga0059261_0658 0.70 +0.8 699,477 - Ga0059261_0658 0.70 -0.6 699,477 - Ga0059261_0658 0.70 -0.5 699,529 + Ga0059261_0658 0.74 +0.3 699,529 + Ga0059261_0658 0.74 -0.0 699,529 + Ga0059261_0658 0.74 +0.8 699,585 + Ga0059261_0658 0.79 +0.2 699,824 + -0.2 699,824 + -0.1 699,825 - -0.1 699,825 - +0.4 699,825 - -0.5 699,825 - +0.4 699,836 + +0.4 699,836 + +0.9 699,836 + -0.0 699,836 + -0.1 699,836 + +1.5 700,163 + Ga0059261_0659 0.67 -0.0 700,164 - Ga0059261_0659 0.67 +0.4 700,205 + Ga0059261_0659 0.76 +0.1 700,244 + Ga0059261_0659 0.85 +0.2 700,245 - Ga0059261_0659 0.85 +0.2 700,263 - Ga0059261_0659 0.89 -0.1 700,264 + Ga0059261_0659 0.89 +0.5 700,615 + Ga0059261_0660 0.36 +0.2 700,789 + Ga0059261_0660 0.59 -0.6 700,789 + Ga0059261_0660 0.59 +0.1 700,789 + Ga0059261_0660 0.59 +0.2 700,790 - Ga0059261_0660 0.59 -0.1 700,790 - Ga0059261_0660 0.59 +1.3 700,819 + Ga0059261_0660 0.63 +0.6 700,819 + Ga0059261_0660 0.63 +0.6 700,819 + Ga0059261_0660 0.63 +0.7 700,819 + Ga0059261_0660 0.63 -0.2 700,820 - +0.4 700,820 - Ga0059261_0660 0.63 +1.0 700,820 - Ga0059261_0660 0.63 +0.1 700,820 - Ga0059261_0660 0.63 +0.4 700,886 + Ga0059261_0660 0.72 +0.5 700,886 + Ga0059261_0660 0.72 +1.2 700,887 - Ga0059261_0660 0.72 +0.4 701,279 - -0.6 701,279 - -0.7 701,279 - -0.1 701,291 - -0.6 701,350 + +0.3 701,350 + +0.1 701,350 + +1.6 701,350 + +0.6 701,350 + -0.4 701,350 + +0.7 701,350 + +0.0 701,350 + +0.3 701,350 + -0.8 701,350 + +0.5 701,351 - -0.4 701,351 - +0.8 701,351 - -0.7 701,351 - -0.5 701,351 - -0.6 701,351 - -0.6 701,351 - -0.2 701,351 - -0.1 701,351 - -0.6 701,361 + +0.1 701,361 + +0.6 701,361 + +0.6 701,362 - -0.2 701,362 - +0.2 701,362 - -0.5 701,434 + Ga0059261_0662 0.19 +0.0 701,435 - Ga0059261_0662 0.20 +0.1 701,435 - Ga0059261_0662 0.20 -0.2 701,435 - Ga0059261_0662 0.20 -0.8 701,557 + Ga0059261_0662 0.49 -0.3 701,557 + Ga0059261_0662 0.49 -0.3 701,557 + Ga0059261_0662 0.49 -0.5 701,767 + -0.7 701,768 - -0.6 701,768 - -0.1
Or see this region's nucleotide sequence