Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11910

Experiment: D-Sorbitol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11900 and BWI76_RS11905 overlap by 4 nucleotidesBWI76_RS11905 and BWI76_RS11910 overlap by 6 nucleotidesBWI76_RS11910 and BWI76_RS11915 overlap by 1 nucleotides BWI76_RS11900: BWI76_RS11900 - cob(I)yrinic acid a,c-diamide adenosyltransferase, at 2,505,262 to 2,505,852 _RS11900 BWI76_RS11905: BWI76_RS11905 - NAD(P)-dependent oxidoreductase, at 2,505,849 to 2,506,610 _RS11905 BWI76_RS11910: BWI76_RS11910 - hypothetical protein, at 2,506,605 to 2,506,820 _RS11910 BWI76_RS11915: BWI76_RS11915 - protease SohB, at 2,506,820 to 2,507,911 _RS11915 Position (kb) 2506 2507Strain fitness (log2 ratio) -1 0 1at 2505.820 kb on + strandat 2506.228 kb on - strand, within BWI76_RS11905at 2506.821 kb on + strandat 2507.022 kb on + strand, within BWI76_RS11915at 2507.202 kb on + strand, within BWI76_RS11915at 2507.405 kb on + strand, within BWI76_RS11915at 2507.666 kb on - strand, within BWI76_RS11915

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Sorbitol (C)
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2,505,820 + -0.4
2,506,228 - BWI76_RS11905 0.50 +0.6
2,506,821 + -0.3
2,507,022 + BWI76_RS11915 0.18 +0.2
2,507,202 + BWI76_RS11915 0.35 -0.7
2,507,405 + BWI76_RS11915 0.54 -0.4
2,507,666 - BWI76_RS11915 0.77 -0.0

Or see this region's nucleotide sequence