Experiment: Choline chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25350 and AO356_25355 are separated by 45 nucleotides AO356_25355 and AO356_25360 overlap by 4 nucleotides AO356_25360 and AO356_25365 overlap by 1 nucleotides
AO356_25350: AO356_25350 - LysR family transcriptional regulator, at 5,734,886 to 5,735,800
_25350
AO356_25355: AO356_25355 - aspartate aminotransferase, at 5,735,846 to 5,737,060
_25355
AO356_25360: AO356_25360 - dimethylmenaquinone methyltransferase, at 5,737,057 to 5,737,695
_25360
AO356_25365: AO356_25365 - diguanylate cyclase, at 5,737,695 to 5,738,357
_25365
Position (kb) 5735
5736
5737
5738 Strain fitness (log2 ratio) -2
-1
0
1 at 5735.081 kb on + strand, within AO356_25350 at 5735.081 kb on + strand, within AO356_25350 at 5735.081 kb on + strand, within AO356_25350 at 5735.400 kb on - strand, within AO356_25350 at 5735.652 kb on + strand, within AO356_25350 at 5735.652 kb on + strand, within AO356_25350 at 5735.652 kb on + strand, within AO356_25350 at 5735.677 kb on + strand, within AO356_25350 at 5735.932 kb on - strand at 5736.075 kb on + strand, within AO356_25355 at 5736.076 kb on - strand, within AO356_25355 at 5736.327 kb on + strand, within AO356_25355 at 5736.328 kb on - strand, within AO356_25355 at 5736.394 kb on + strand, within AO356_25355 at 5736.396 kb on + strand, within AO356_25355 at 5736.397 kb on - strand, within AO356_25355 at 5736.397 kb on - strand, within AO356_25355 at 5736.397 kb on - strand, within AO356_25355 at 5736.397 kb on - strand, within AO356_25355 at 5736.397 kb on - strand, within AO356_25355 at 5736.397 kb on - strand, within AO356_25355 at 5736.430 kb on - strand, within AO356_25355 at 5736.430 kb on - strand, within AO356_25355 at 5736.507 kb on + strand, within AO356_25355 at 5736.507 kb on + strand, within AO356_25355 at 5736.507 kb on + strand, within AO356_25355 at 5736.735 kb on + strand, within AO356_25355 at 5736.736 kb on - strand, within AO356_25355 at 5736.840 kb on - strand, within AO356_25355 at 5736.999 kb on + strand at 5737.628 kb on + strand, within AO356_25360 at 5737.629 kb on - strand, within AO356_25360
Per-strain Table
Position Strand Gene LocusTag Fraction Choline chloride 500 mM remove 5,735,081 + AO356_25350 0.21 +0.9 5,735,081 + AO356_25350 0.21 +0.0 5,735,081 + AO356_25350 0.21 -0.3 5,735,400 - AO356_25350 0.56 +0.4 5,735,652 + AO356_25350 0.84 -0.4 5,735,652 + AO356_25350 0.84 +0.8 5,735,652 + AO356_25350 0.84 +1.1 5,735,677 + AO356_25350 0.86 +0.8 5,735,932 - +0.6 5,736,075 + AO356_25355 0.19 -1.1 5,736,076 - AO356_25355 0.19 +0.6 5,736,327 + AO356_25355 0.40 +0.4 5,736,328 - AO356_25355 0.40 +0.2 5,736,394 + AO356_25355 0.45 -0.1 5,736,396 + AO356_25355 0.45 -0.6 5,736,397 - AO356_25355 0.45 +1.4 5,736,397 - AO356_25355 0.45 +0.4 5,736,397 - AO356_25355 0.45 -0.0 5,736,397 - AO356_25355 0.45 -0.4 5,736,397 - AO356_25355 0.45 +0.2 5,736,397 - AO356_25355 0.45 -2.5 5,736,430 - AO356_25355 0.48 -0.3 5,736,430 - AO356_25355 0.48 -1.1 5,736,507 + AO356_25355 0.54 -0.0 5,736,507 + AO356_25355 0.54 -0.3 5,736,507 + AO356_25355 0.54 -1.4 5,736,735 + AO356_25355 0.73 +0.2 5,736,736 - AO356_25355 0.73 -0.2 5,736,840 - AO356_25355 0.82 -1.2 5,736,999 + +0.4 5,737,628 + AO356_25360 0.89 -1.0 5,737,629 - AO356_25360 0.90 +0.1
Or see this region's nucleotide sequence