Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_19295

Experiment: Choline chloride 500 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 500 mM
4,327,574	+		AO356_19290	0.22	-1.8
4,327,574	+		AO356_19290	0.22	-0.9
4,327,574	+		AO356_19290	0.22	-0.1
4,327,574	+		AO356_19290	0.22	-0.0
4,327,574	+		AO356_19290	0.22	-0.9
4,327,574	+		AO356_19290	0.22	+0.5
4,327,574	+		AO356_19290	0.22	+0.1
4,327,575	-		AO356_19290	0.22	-0.1
4,327,575	-		AO356_19290	0.22	-0.7
4,327,575	-		AO356_19290	0.22	-0.2
4,327,575	-		AO356_19290	0.22	-0.1
4,327,575	-		AO356_19290	0.22	-0.2
4,327,575	-		AO356_19290	0.22	+0.1
4,327,575	-		AO356_19290	0.22	+0.5
4,327,575	-		AO356_19290	0.22	+1.4
4,327,636	+		AO356_19290	0.27	-0.3
4,327,698	+		AO356_19290	0.33	+0.7
4,327,698	+		AO356_19290	0.33	+0.1
4,327,700	+		AO356_19290	0.33	-0.6
4,327,700	+		AO356_19290	0.33	+0.6
4,327,700	+		AO356_19290	0.33	-0.5
4,327,700	+		AO356_19290	0.33	+0.8
4,327,700	+		AO356_19290	0.33	-1.2
4,327,700	+		AO356_19290	0.33	-0.3
4,327,700	+		AO356_19290	0.33	+0.9
4,327,700	+		AO356_19290	0.33	-0.6
4,327,701	-		AO356_19290	0.33	-0.9
4,327,701	-		AO356_19290	0.33	-1.2
4,327,701	-		AO356_19290	0.33	-0.4
4,327,701	-		AO356_19290	0.33	+1.4
4,327,701	-		AO356_19290	0.33	+0.0
4,327,701	-		AO356_19290	0.33	+0.1
4,327,701	-		AO356_19290	0.33	-0.6
4,327,701	-		AO356_19290	0.33	+1.0
4,327,701	-		AO356_19290	0.33	+0.8
4,327,701	-		AO356_19290	0.33	+0.6
4,327,701	-		AO356_19290	0.33	-0.1
4,327,763	+		AO356_19290	0.38	-0.1
4,327,781	+		AO356_19290	0.40	-1.2
4,327,781	+		AO356_19290	0.40	-0.1
4,327,782	-		AO356_19290	0.40	+0.4
4,327,928	+		AO356_19290	0.53	+0.7
4,328,235	-		AO356_19290	0.80	+0.1
4,328,478	-				+0.8
4,328,478	-				-0.1
4,328,496	+				+0.9
4,328,496	+				-2.1
4,328,496	+				-0.7
4,328,496	+				-0.4
4,328,497	-				-0.0
4,328,497	-				+0.0
4,328,497	-				-0.0
4,328,497	-				-0.1
4,328,535	+				+1.6
4,328,535	+				-0.7
4,328,536	-				-0.3
4,328,656	+				+0.1
4,328,657	-				+0.8
4,328,657	-				-0.9
4,328,657	-				+0.3
4,328,706	+		AO356_19295	0.12	+1.0
4,328,707	-		AO356_19295	0.12	-1.7
4,328,722	+		AO356_19295	0.13	+0.1
4,328,723	-		AO356_19295	0.13	-0.3
4,328,724	+		AO356_19295	0.13	-0.6
4,328,724	+		AO356_19295	0.13	-0.5
4,328,724	+		AO356_19295	0.13	+0.8
4,328,724	+		AO356_19295	0.13	+0.5
4,328,724	+		AO356_19295	0.13	+0.9
4,328,724	+		AO356_19295	0.13	-0.3
4,328,724	+		AO356_19295	0.13	+0.2
4,328,725	-		AO356_19295	0.13	+0.2
4,328,725	-		AO356_19295	0.13	+0.4
4,328,725	-		AO356_19295	0.13	+0.7
4,328,725	-		AO356_19295	0.13	+0.1
4,328,725	-		AO356_19295	0.13	-0.1
4,328,725	-		AO356_19295	0.13	-0.1
4,328,725	-		AO356_19295	0.13	+0.2
4,328,725	-		AO356_19295	0.13	-0.3
4,328,725	-		AO356_19295	0.13	+0.1
4,328,725	-		AO356_19295	0.13	+0.5
4,328,725	-		AO356_19295	0.13	+0.5
4,328,766	+		AO356_19295	0.15	+0.7
4,328,766	+		AO356_19295	0.15	-0.1
4,328,766	+		AO356_19295	0.15	+0.1
4,328,767	-		AO356_19295	0.15	-0.7
4,328,767	-		AO356_19295	0.15	-0.6
4,328,838	+		AO356_19295	0.19	-1.7
4,328,952	+		AO356_19295	0.25	+1.4
4,328,952	+		AO356_19295	0.25	-2.9
4,328,952	+		AO356_19295	0.25	-1.6
4,328,953	-		AO356_19295	0.25	-0.1
4,328,953	-		AO356_19295	0.25	+0.8
4,328,953	-		AO356_19295	0.25	-0.7
4,328,953	-		AO356_19295	0.25	+1.4
4,328,953	-		AO356_19295	0.25	-0.4
4,328,953	-		AO356_19295	0.25	+0.5
4,329,091	+		AO356_19295	0.33	-1.2
4,329,092	-		AO356_19295	0.33	+0.8
4,329,479	+		AO356_19295	0.54	+0.3
4,329,480	-		AO356_19295	0.55	-0.0
4,329,480	-		AO356_19295	0.55	-0.5
4,329,705	+		AO356_19295	0.67	-0.9
4,329,706	-		AO356_19295	0.67	-0.4
4,329,706	-		AO356_19295	0.67	+0.8
4,329,706	-		AO356_19295	0.67	+0.8
4,329,719	+		AO356_19295	0.68	-0.9
4,329,719	+		AO356_19295	0.68	-0.9
4,329,756	+		AO356_19295	0.70	-0.3
4,329,757	-		AO356_19295	0.70	+0.8
4,329,757	-		AO356_19295	0.70	-0.6
4,329,757	-		AO356_19295	0.70	-0.4
4,329,757	-		AO356_19295	0.70	+0.9
4,329,757	-		AO356_19295	0.70	-0.3
4,329,757	-		AO356_19295	0.70	+0.0
4,329,757	-		AO356_19295	0.70	+0.7
4,329,757	-		AO356_19295	0.70	+0.4
4,329,757	-		AO356_19295	0.70	-2.2
4,329,757	-		AO356_19295	0.70	-0.6
4,329,759	+		AO356_19295	0.70	+0.8
4,329,759	+		AO356_19295	0.70	-0.5
4,329,759	+		AO356_19295	0.70	+1.5
4,329,760	-		AO356_19295	0.70	+0.4
4,329,763	+		AO356_19295	0.70	+1.3
4,329,763	+		AO356_19295	0.70	+0.1
4,329,763	+		AO356_19295	0.70	+0.2
4,329,764	-		AO356_19295	0.70	-1.2
4,329,809	+		AO356_19295	0.73	+0.5
4,329,810	-		AO356_19295	0.73	-0.8
4,329,814	+		AO356_19295	0.73	+0.1
4,329,814	+		AO356_19295	0.73	+0.6
4,329,815	-		AO356_19295	0.73	-0.8
4,329,815	-		AO356_19295	0.73	-0.7
4,329,815	-		AO356_19295	0.73	+1.1
4,329,823	+		AO356_19295	0.74	+1.2
4,329,823	+		AO356_19295	0.74	+0.4
4,329,823	+		AO356_19295	0.74	-0.7
4,329,823	+		AO356_19295	0.74	+0.8
4,329,823	+		AO356_19295	0.74	-0.3
4,329,823	+		AO356_19295	0.74	-0.3
4,329,823	+		AO356_19295	0.74	-0.1
4,329,823	+		AO356_19295	0.74	+0.9
4,329,823	+		AO356_19295	0.74	+1.0
4,329,823	+		AO356_19295	0.74	+1.2
4,329,823	+		AO356_19295	0.74	+1.0
4,329,823	+		AO356_19295	0.74	-1.2
4,329,823	+		AO356_19295	0.74	+0.9
4,329,824	-		AO356_19295	0.74	-0.5
4,329,824	-		AO356_19295	0.74	-1.4
4,329,884	+		AO356_19295	0.77	+0.7
4,329,885	-		AO356_19295	0.77	+0.3
4,329,885	-		AO356_19295	0.77	-0.6
4,329,896	-		AO356_19295	0.78	+0.4
4,330,038	+		AO356_19295	0.85	-1.2
4,330,038	+		AO356_19295	0.85	+1.5
4,330,098	+		AO356_19295	0.89	+0.7
4,330,137	+				-0.4
4,330,137	+				-0.9
4,330,137	+				-1.9
4,330,137	+				+0.3
4,330,137	+				-0.4
4,330,137	+				+0.4
4,330,138	-				-0.2
4,330,138	-				-0.3
4,330,138	-				+0.0
4,330,138	-				-0.2
4,330,140	+				-0.1
4,330,140	+				-0.5
4,330,141	-				-0.1
4,330,141	-				+0.4
4,330,176	+				+1.2
4,330,176	+				-0.6
4,330,177	-				-0.8
4,330,177	-				-0.6
4,330,177	-				+2.0
4,330,177	-				+0.3
4,330,177	-				+0.4
4,330,199	-				+0.4
4,330,200	+				-0.9
4,330,200	+				-0.3
4,330,200	+				+0.5
4,330,200	+				+0.8
4,330,200	+				-0.4
4,330,200	+				+0.6
4,330,200	+				-0.1
4,330,201	-				-1.0
4,330,201	-				-0.6
4,330,201	-				+1.1
4,330,201	-				-1.0
4,330,201	-				-0.2
4,330,201	-				-0.5
4,330,201	-				-0.9
4,330,201	-				-0.3
4,330,227	+				+0.1
4,330,227	+				+1.3
4,330,227	+				+0.6
4,330,228	-				-0.4
4,330,228	-				+0.6
4,330,228	-				-0.2
4,330,230	+				+0.5
4,330,230	+				-0.7
4,330,332	-				-0.6
4,330,403	+				+0.5
4,330,403	+				+1.2
4,330,403	+				-1.0
4,330,404	-				+0.1
4,330,407	+				-0.7
4,330,407	+				-0.0
4,330,407	+				+1.2
4,330,408	-				-0.5
4,330,440	+				+0.2
4,330,465	+				-0.9
4,330,465	+				-0.5
4,330,465	+				-1.2
4,330,465	+				-0.8
4,330,466	-				-0.8
4,330,466	-				+0.2
4,330,466	-				+0.3
4,330,466	-				-0.5
4,330,517	+				-0.1
4,330,518	-				-2.6
4,330,518	-				-1.2
4,330,531	+				+0.1
4,330,532	-				-0.6
4,330,547	-				-1.7
4,330,566	+				-1.6
4,330,566	+				-1.5
4,330,566	+				-0.8
4,330,566	+				-1.1
4,330,566	+				-1.1
4,330,566	+				-1.2
4,330,566	+				-1.6
4,330,566	+				-0.5
4,330,566	+				-2.6
4,330,566	+				-0.7
4,330,567	-				-2.3
4,330,567	-				-1.2
4,330,616	+				-1.6
4,330,617	-				-1.1
4,330,646	+		AO356_19300	0.11	-1.4
4,330,646	+		AO356_19300	0.11	-1.7
4,330,646	+		AO356_19300	0.11	-1.2
4,330,647	-		AO356_19300	0.11	-1.3
4,330,647	-		AO356_19300	0.11	-2.7
4,330,678	+		AO356_19300	0.15	-1.9
4,330,678	+		AO356_19300	0.15	-1.5
4,330,678	+		AO356_19300	0.15	-0.5
4,330,683	+		AO356_19300	0.16	-0.7
4,330,684	-		AO356_19300	0.16	-1.4
4,330,684	-		AO356_19300	0.16	-0.7
4,330,926	+		AO356_19300	0.50	-1.0
4,330,926	+		AO356_19300	0.50	-1.2
4,330,951	+		AO356_19300	0.53	-2.2
4,330,952	-		AO356_19300	0.54	-1.3
4,330,987	-		AO356_19300	0.58	-1.7
4,330,987	-		AO356_19300	0.58	-1.8
4,330,987	-		AO356_19300	0.58	-1.4
4,330,987	-		AO356_19300	0.58	+0.6
4,331,000	+		AO356_19300	0.60	-0.6
4,331,000	+		AO356_19300	0.60	-1.9
4,331,000	+		AO356_19300	0.60	-2.2
4,331,000	+		AO356_19300	0.60	+0.1
4,331,000	+		AO356_19300	0.60	-2.1
4,331,000	+		AO356_19300	0.60	-0.7
4,331,001	-		AO356_19300	0.60	-2.0
4,331,001	-		AO356_19300	0.60	-0.3
4,331,001	-		AO356_19300	0.60	-1.2
4,331,001	-		AO356_19300	0.60	-0.8
4,331,014	+		AO356_19300	0.62	-2.2
4,331,014	+		AO356_19300	0.62	-0.7
4,331,014	+		AO356_19300	0.62	-0.7
4,331,015	-		AO356_19300	0.62	-2.1
4,331,015	-		AO356_19300	0.62	-1.5
4,331,015	-		AO356_19300	0.62	-2.9
4,331,146	+		AO356_19300	0.81	+0.2
4,331,146	+		AO356_19300	0.81	-2.0
4,331,146	+		AO356_19300	0.81	-0.1
4,331,146	+		AO356_19300	0.81	-1.7
4,331,147	-		AO356_19300	0.81	-1.8
4,331,147	-		AO356_19300	0.81	-0.6
4,331,147	-		AO356_19300	0.81	-0.8
4,331,155	+		AO356_19300	0.82	-1.9
4,331,155	+		AO356_19300	0.82	-2.3
4,331,155	+		AO356_19300	0.82	-1.7
4,331,155	+		AO356_19300	0.82	-0.9
4,331,155	+		AO356_19300	0.82	-2.7
4,331,155	+		AO356_19300	0.82	-2.4
4,331,155	+		AO356_19300	0.82	-0.8
4,331,156	-		AO356_19300	0.82	-1.8
4,331,156	-		AO356_19300	0.82	-1.3
4,331,156	-		AO356_19300	0.82	-0.5
4,331,156	-		AO356_19300	0.82	-0.6
4,331,177	-		AO356_19300	0.85	+1.0
4,331,281	+				+0.6
4,331,282	-				-0.2
4,331,282	-				-0.3
4,331,282	-				-1.2
4,331,294	+				+0.0
4,331,294	+				-0.8
4,331,294	+				-1.0
4,331,294	+				-0.8
4,331,294	+				-0.1
4,331,295	-				-1.7