Strain Fitness in Shewanella loihica PV-4 around Shew_1608

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,838,259	-		Shew_1606	0.25	-0.0
1,838,667	+		Shew_1607	0.17	-0.1
1,838,706	+		Shew_1607	0.25	+0.2
1,839,163	+				+0.3
1,839,388	+		Shew_1608	0.18	-0.0
1,839,781	-		Shew_1608	0.43	-1.8
1,839,955	+		Shew_1608	0.54	+0.4
1,839,991	-		Shew_1608	0.56	-0.4
1,840,320	+		Shew_1608	0.77	-0.2
1,840,490	+		Shew_1608	0.88	-1.0
1,840,552	-				+0.6
1,840,621	+				-0.3
1,840,675	+				-0.2
1,840,675	+				+0.3
1,840,775	+				-0.3
1,840,789	+				-0.1
1,840,789	+				-0.4
1,840,806	+		Shew_1609	0.12	-0.0
1,841,529	+				-0.4