Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_21100

Experiment: Choline chloride 300 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline chloride 300 mM
4,694,808	+		AO356_21095	0.26	+1.0
4,695,804	+				+1.9
4,695,804	+				+1.3
4,695,858	+				+1.4
4,695,858	+				+1.4
4,695,859	-				+2.3
4,696,222	+				+0.4
4,696,223	-				+1.2
4,696,249	-				+1.2
4,696,446	+				+0.6
4,696,817	+				+2.1
4,696,817	+				+0.9
4,696,818	-				+0.1
4,696,839	+				+1.7
4,696,839	+				+1.0
4,696,839	+				+1.0
4,696,839	+				+0.1
4,696,839	+				+1.5
4,696,839	+				+0.6
4,696,840	-				+0.9
4,696,840	-				+1.2
4,696,840	-				+0.9
4,697,259	+		AO356_21100	0.13	+1.1
4,697,297	+		AO356_21100	0.13	+0.8
4,697,406	+		AO356_21100	0.14	+1.4
4,697,448	+		AO356_21100	0.14	+1.3
4,697,449	-		AO356_21100	0.14	+1.0
4,697,613	+		AO356_21100	0.16	+1.2
4,697,613	+		AO356_21100	0.16	+2.0
4,697,613	+		AO356_21100	0.16	+1.7
4,697,614	-		AO356_21100	0.16	+1.3
4,697,614	-		AO356_21100	0.16	+1.6
4,697,622	+		AO356_21100	0.16	+1.6
4,697,622	+		AO356_21100	0.16	+1.0
4,697,622	+		AO356_21100	0.16	+0.9
4,697,623	-		AO356_21100	0.16	+1.7
4,697,623	-		AO356_21100	0.16	+1.5
4,697,710	-		AO356_21100	0.16	+0.3
4,697,734	+		AO356_21100	0.17	+0.8
4,697,986	+		AO356_21100	0.19	+1.0
4,698,111	+		AO356_21100	0.20	+0.3
4,698,111	+		AO356_21100	0.20	+1.5
4,698,112	-		AO356_21100	0.20	+0.3
4,698,112	-		AO356_21100	0.20	+0.9
4,698,144	+		AO356_21100	0.20	+2.0
4,698,144	+		AO356_21100	0.20	+0.9
4,698,144	+		AO356_21100	0.20	+1.4
4,698,144	+		AO356_21100	0.20	+1.2
4,698,145	-		AO356_21100	0.20	+1.0
4,698,145	-		AO356_21100	0.20	-0.7
4,698,145	-		AO356_21100	0.20	+1.5
4,698,216	+		AO356_21100	0.20	+1.4
4,698,270	+		AO356_21100	0.21	+1.1
4,698,333	+		AO356_21100	0.21	+1.7
4,698,333	+		AO356_21100	0.21	+1.7
4,698,333	+		AO356_21100	0.21	+0.9
4,698,334	-		AO356_21100	0.21	+1.7
4,698,334	-		AO356_21100	0.21	+0.9
4,698,334	-		AO356_21100	0.21	+0.9
4,698,334	-		AO356_21100	0.21	+1.1
4,698,334	-		AO356_21100	0.21	+1.3
4,698,420	+		AO356_21100	0.22	+1.8
4,698,420	+		AO356_21100	0.22	+1.9
4,698,421	-		AO356_21100	0.22	+1.0
4,698,667	-		AO356_21100	0.24	+1.4
4,698,667	-		AO356_21100	0.24	+1.4
4,698,682	-		AO356_21100	0.24	+1.6
4,698,991	+		AO356_21100	0.27	+1.1
4,699,242	+		AO356_21100	0.29	+1.0
4,699,591	-		AO356_21100	0.31	+1.5
4,699,741	-		AO356_21100	0.33	+0.9
4,700,011	-		AO356_21100	0.35	+1.4
4,700,427	+		AO356_21100	0.38	+1.3
4,700,472	+		AO356_21100	0.38	+2.3
4,700,472	+		AO356_21100	0.38	-0.2
4,700,493	+		AO356_21100	0.39	+1.5
4,700,493	+		AO356_21100	0.39	+1.4
4,700,493	+		AO356_21100	0.39	+1.5
4,700,493	+		AO356_21100	0.39	+0.8
4,700,494	-		AO356_21100	0.39	+0.2
4,700,812	-		AO356_21100	0.41	+2.2
4,700,880	+		AO356_21100	0.42	+0.8
4,700,926	-		AO356_21100	0.42	+1.1
4,701,174	+		AO356_21100	0.44	+1.5
4,701,174	+		AO356_21100	0.44	+1.5
4,701,337	+		AO356_21100	0.45	+1.4
4,701,577	+		AO356_21100	0.47	+1.0
4,701,577	-		AO356_21100	0.47	+0.9
4,701,577	-		AO356_21100	0.47	+0.9
4,701,577	-		AO356_21100	0.47	+0.3
4,701,991	-		AO356_21100	0.51	+1.5
4,702,032	+		AO356_21100	0.51	+1.0
4,702,032	+		AO356_21100	0.51	+0.8
4,702,033	-		AO356_21100	0.51	-0.0
4,702,197	+		AO356_21100	0.52	+1.6
4,702,206	+		AO356_21100	0.52	+0.4
4,702,207	-		AO356_21100	0.52	+1.0
4,702,207	-		AO356_21100	0.52	+0.3
4,702,293	+		AO356_21100	0.53	+1.6
4,702,294	-		AO356_21100	0.53	+0.9
4,702,434	+		AO356_21100	0.54	+0.9
4,702,434	+		AO356_21100	0.54	+1.9
4,702,434	+		AO356_21100	0.54	+0.5
4,702,435	-		AO356_21100	0.54	+1.2
4,702,435	-		AO356_21100	0.54	+0.9
4,702,485	+		AO356_21100	0.54	+1.1
4,702,485	+		AO356_21100	0.54	+1.0
4,702,485	+		AO356_21100	0.54	-0.1
4,702,545	+		AO356_21100	0.55	+0.8
4,702,702	-		AO356_21100	0.56	+0.7
4,702,794	+		AO356_21100	0.57	+0.9
4,703,097	+		AO356_21100	0.59	+1.1
4,703,097	+		AO356_21100	0.59	+0.7
4,703,097	+		AO356_21100	0.59	+1.1
4,703,098	-		AO356_21100	0.59	+0.0
4,703,191	-		AO356_21100	0.60	+0.9
4,703,286	+		AO356_21100	0.61	+0.9
4,703,286	+		AO356_21100	0.61	+0.6
4,703,287	-		AO356_21100	0.61	+1.8
4,704,072	+		AO356_21100	0.67	+1.4
4,704,073	-		AO356_21100	0.67	+1.5
4,704,591	+		AO356_21100	0.71	+0.7
4,704,592	-		AO356_21100	0.71	+2.4
4,704,592	-		AO356_21100	0.71	+0.9
4,704,805	-		AO356_21100	0.73	+1.2
4,704,805	-		AO356_21100	0.73	+0.5
4,704,805	-		AO356_21100	0.73	+0.4
4,705,014	+		AO356_21100	0.75	+0.3
4,705,015	-		AO356_21100	0.75	+0.3
4,705,332	+		AO356_21100	0.77	+1.1
4,705,446	+		AO356_21100	0.78	-0.3
4,705,446	+		AO356_21100	0.78	+0.4
4,705,447	-		AO356_21100	0.78	+1.0
4,705,507	+		AO356_21100	0.79	-0.5
4,705,507	+		AO356_21100	0.79	+0.9
4,705,508	-		AO356_21100	0.79	+1.5
4,706,112	+		AO356_21100	0.83	+1.6
4,706,379	+		AO356_21100	0.86	+0.8
4,706,527	-		AO356_21100	0.87	+1.5
4,706,829	+		AO356_21100	0.89	+1.4
4,706,830	-		AO356_21100	0.89	+0.6
4,706,838	+		AO356_21100	0.89	+0.6
4,706,838	+		AO356_21100	0.89	+1.7
4,706,838	+		AO356_21100	0.89	+1.2
4,706,838	+		AO356_21100	0.89	+0.7
4,706,998	-				+0.6
4,707,351	+				+1.6
4,707,351	+				+0.5
4,707,352	-				+0.9
4,707,435	+				+1.0
4,707,700	-				+0.9
4,707,786	+				+1.8
4,707,897	+				+0.2
4,707,897	+				+1.4
4,708,410	+				+1.1
4,708,410	+				+0.0
4,708,410	+				+1.8
4,708,411	-				+0.3
4,708,730	+				+0.3
4,708,730	+				+1.0
4,708,731	-				+0.4
4,708,731	-				+1.1
4,708,782	+				+1.1
4,708,782	+				+1.5
4,708,782	+				+0.7
4,708,783	-				+1.5
4,708,783	-				+1.4
4,708,783	-				+0.9
4,708,845	+				+1.5
4,708,902	+				+1.7
4,709,037	+				+1.0