Experiment: Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_3136 and Shew_3137 are separated by 368 nucleotides Shew_3137 and Shew_3138 are separated by 150 nucleotides Shew_3138 and Shew_3139 overlap by 4 nucleotides Shew_3139 and Shew_3140 are separated by 89 nucleotides
Shew_3136: Shew_3136 - FAD linked oxidase domain-containing protein (RefSeq), at 3,729,217 to 3,732,021
_3136
Shew_3137: Shew_3137 - hypothetical protein (RefSeq), at 3,732,390 to 3,732,950
_3137
Shew_3138: Shew_3138 - hypothetical protein (RefSeq), at 3,733,101 to 3,733,517
_3138
Shew_3139: Shew_3139 - hypothetical protein (RefSeq), at 3,733,514 to 3,733,828
_3139
Shew_3140: Shew_3140 - ABC-2 type transporter (RefSeq), at 3,733,918 to 3,734,706
_3140
Position (kb) 3732
3733 Strain fitness (log2 ratio) -1
0
1 at 3731.604 kb on + strand, within Shew_3136 at 3731.612 kb on - strand, within Shew_3136 at 3731.717 kb on - strand, within Shew_3136 at 3732.234 kb on + strand at 3732.314 kb on + strand at 3732.586 kb on - strand, within Shew_3137 at 3732.688 kb on + strand, within Shew_3137 at 3732.815 kb on + strand, within Shew_3137 at 3733.795 kb on + strand, within Shew_3139
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 1 mM remove 3,731,604 + Shew_3136 0.85 +0.0 3,731,612 - Shew_3136 0.85 +0.1 3,731,717 - Shew_3136 0.89 +0.0 3,732,234 + -0.1 3,732,314 + -0.1 3,732,586 - Shew_3137 0.35 +0.5 3,732,688 + Shew_3137 0.53 +0.1 3,732,815 + Shew_3137 0.76 +1.6 3,733,795 + Shew_3139 0.89 +1.4
Or see this region's nucleotide sequence