Strain Fitness in Shewanella loihica PV-4 around Shew_1902
Experiment: Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
2,196,566 | + | +0.2 | |||
2,196,594 | + | +0.1 | |||
2,196,752 | - | Shew_1901 | 0.30 | -0.1 | |
2,196,841 | + | Shew_1901 | 0.56 | +1.7 | |
2,197,052 | - | +0.0 | |||
2,197,052 | - | -0.5 | |||
2,197,758 | - | -0.1 | |||
2,198,410 | - | Shew_1903 | 0.50 | +1.3 | |
2,198,630 | - | Shew_1903 | 0.66 | -0.1 |
Or see this region's nucleotide sequence