Experiment: Uridine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0367 and Dshi_0368 overlap by 4 nucleotides Dshi_0368 and Dshi_0369 are separated by 17 nucleotides
Dshi_0367: Dshi_0367 - amine oxidase (RefSeq), at 350,649 to 351,953
_0367
Dshi_0368: Dshi_0368 - protein of unknown function DUF1365 (RefSeq), at 351,950 to 352,708
_0368
Dshi_0369: Dshi_0369 - sodium:galactoside symporter family protein, putative (RefSeq), at 352,726 to 353,964
_0369
Position (kb) 351
352
353 Strain fitness (log2 ratio) -1
0
1
2 at 350.990 kb on - strand, within Dshi_0367 at 351.006 kb on - strand, within Dshi_0367 at 351.064 kb on + strand, within Dshi_0367 at 351.066 kb on + strand, within Dshi_0367 at 351.113 kb on - strand, within Dshi_0367 at 351.227 kb on - strand, within Dshi_0367 at 351.256 kb on + strand, within Dshi_0367 at 351.269 kb on + strand, within Dshi_0367 at 351.348 kb on - strand, within Dshi_0367 at 351.462 kb on + strand, within Dshi_0367 at 351.522 kb on + strand, within Dshi_0367 at 351.526 kb on + strand, within Dshi_0367 at 351.554 kb on - strand, within Dshi_0367 at 351.560 kb on + strand, within Dshi_0367 at 351.587 kb on + strand, within Dshi_0367 at 351.587 kb on + strand, within Dshi_0367 at 351.595 kb on - strand, within Dshi_0367 at 351.595 kb on - strand, within Dshi_0367 at 351.597 kb on + strand, within Dshi_0367 at 351.597 kb on + strand, within Dshi_0367 at 351.642 kb on + strand, within Dshi_0367 at 351.712 kb on - strand, within Dshi_0367 at 351.768 kb on + strand, within Dshi_0367 at 351.876 kb on + strand at 351.884 kb on - strand at 351.894 kb on - strand at 351.992 kb on + strand at 352.139 kb on + strand, within Dshi_0368 at 352.263 kb on + strand, within Dshi_0368 at 352.271 kb on - strand, within Dshi_0368 at 352.400 kb on - strand, within Dshi_0368 at 352.454 kb on - strand, within Dshi_0368 at 352.454 kb on - strand, within Dshi_0368 at 352.509 kb on - strand, within Dshi_0368 at 352.570 kb on + strand, within Dshi_0368 at 352.653 kb on - strand at 352.674 kb on + strand at 352.706 kb on - strand at 352.833 kb on + strand at 352.833 kb on + strand at 352.835 kb on + strand at 352.849 kb on - strand at 353.049 kb on - strand, within Dshi_0369 at 353.050 kb on - strand, within Dshi_0369 at 353.054 kb on - strand, within Dshi_0369 at 353.137 kb on - strand, within Dshi_0369 at 353.233 kb on + strand, within Dshi_0369 at 353.280 kb on + strand, within Dshi_0369 at 353.301 kb on + strand, within Dshi_0369 at 353.336 kb on - strand, within Dshi_0369 at 353.402 kb on - strand, within Dshi_0369 at 353.407 kb on - strand, within Dshi_0369 at 353.523 kb on + strand, within Dshi_0369 at 353.524 kb on + strand, within Dshi_0369 at 353.532 kb on - strand, within Dshi_0369 at 353.611 kb on + strand, within Dshi_0369 at 353.683 kb on + strand, within Dshi_0369
Per-strain Table
Position Strand Gene LocusTag Fraction Uridine (N) remove 350,990 - Dshi_0367 0.26 +0.0 351,006 - Dshi_0367 0.27 +0.3 351,064 + Dshi_0367 0.32 +0.7 351,066 + Dshi_0367 0.32 -0.1 351,113 - Dshi_0367 0.36 +0.3 351,227 - Dshi_0367 0.44 +0.7 351,256 + Dshi_0367 0.47 +0.5 351,269 + Dshi_0367 0.48 +1.5 351,348 - Dshi_0367 0.54 +0.5 351,462 + Dshi_0367 0.62 +0.7 351,522 + Dshi_0367 0.67 +0.2 351,526 + Dshi_0367 0.67 +0.5 351,554 - Dshi_0367 0.69 -0.1 351,560 + Dshi_0367 0.70 -0.1 351,587 + Dshi_0367 0.72 +0.3 351,587 + Dshi_0367 0.72 +1.5 351,595 - Dshi_0367 0.72 +0.2 351,595 - Dshi_0367 0.72 +0.5 351,597 + Dshi_0367 0.73 +0.3 351,597 + Dshi_0367 0.73 +0.6 351,642 + Dshi_0367 0.76 +0.3 351,712 - Dshi_0367 0.81 +0.5 351,768 + Dshi_0367 0.86 -1.1 351,876 + -0.9 351,884 - -0.3 351,894 - +0.4 351,992 + +0.6 352,139 + Dshi_0368 0.25 +0.9 352,263 + Dshi_0368 0.41 +0.1 352,271 - Dshi_0368 0.42 +0.9 352,400 - Dshi_0368 0.59 +0.1 352,454 - Dshi_0368 0.66 +0.8 352,454 - Dshi_0368 0.66 +1.4 352,509 - Dshi_0368 0.74 +2.0 352,570 + Dshi_0368 0.82 +0.0 352,653 - +1.8 352,674 + +0.3 352,706 - +0.5 352,833 + +0.6 352,833 + +0.6 352,835 + +0.9 352,849 - -0.3 353,049 - Dshi_0369 0.26 -0.6 353,050 - Dshi_0369 0.26 +0.5 353,054 - Dshi_0369 0.26 -0.9 353,137 - Dshi_0369 0.33 -1.6 353,233 + Dshi_0369 0.41 +0.3 353,280 + Dshi_0369 0.45 +0.3 353,301 + Dshi_0369 0.46 +0.8 353,336 - Dshi_0369 0.49 -0.9 353,402 - Dshi_0369 0.55 +0.1 353,407 - Dshi_0369 0.55 +0.6 353,523 + Dshi_0369 0.64 -0.0 353,524 + Dshi_0369 0.64 -0.2 353,532 - Dshi_0369 0.65 +0.3 353,611 + Dshi_0369 0.71 -0.4 353,683 + Dshi_0369 0.77 +1.6
Or see this region's nucleotide sequence