Experiment: tungstate 0.05 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_292 and Pf6N2E2_293 are separated by 217 nucleotides Pf6N2E2_293 and Pf6N2E2_294 are separated by 123 nucleotides Pf6N2E2_294 and Pf6N2E2_295 are separated by 57 nucleotides Pf6N2E2_295 and Pf6N2E2_296 are separated by 81 nucleotides
Pf6N2E2_292 - ATP-dependent Clp protease ATP-binding subunit ClpA, at 360,587 to 362,857
_292
Pf6N2E2_293 - Translation initiation factor 1, at 363,075 to 363,293
_293
Pf6N2E2_294 - Arginine-tRNA-protein transferase (EC 2.3.2.8), at 363,417 to 364,124
_294
Pf6N2E2_295 - Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6), at 364,182 to 364,862
_295
Pf6N2E2_296 - Thioredoxin reductase (EC 1.8.1.9), at 364,944 to 365,903
_296
Position (kb) 363
364
365 Strain fitness (log2 ratio) -1
0
1
2
3 at 362.907 kb on - strand at 362.907 kb on - strand at 363.396 kb on - strand at 363.396 kb on - strand at 363.402 kb on - strand at 363.402 kb on - strand at 363.402 kb on - strand at 363.404 kb on - strand at 363.479 kb on - strand at 363.517 kb on + strand, within Pf6N2E2_294 at 363.518 kb on - strand, within Pf6N2E2_294 at 363.518 kb on - strand, within Pf6N2E2_294 at 363.608 kb on - strand, within Pf6N2E2_294 at 363.608 kb on - strand, within Pf6N2E2_294 at 363.608 kb on - strand, within Pf6N2E2_294 at 363.616 kb on + strand, within Pf6N2E2_294 at 363.616 kb on + strand, within Pf6N2E2_294 at 363.616 kb on + strand, within Pf6N2E2_294 at 363.617 kb on - strand, within Pf6N2E2_294 at 363.692 kb on - strand, within Pf6N2E2_294 at 363.692 kb on - strand, within Pf6N2E2_294 at 363.754 kb on + strand, within Pf6N2E2_294 at 363.754 kb on + strand, within Pf6N2E2_294 at 363.754 kb on + strand, within Pf6N2E2_294 at 363.755 kb on - strand, within Pf6N2E2_294 at 363.755 kb on - strand, within Pf6N2E2_294 at 363.787 kb on + strand, within Pf6N2E2_294 at 363.787 kb on + strand, within Pf6N2E2_294 at 363.787 kb on + strand, within Pf6N2E2_294 at 363.787 kb on + strand, within Pf6N2E2_294 at 363.788 kb on - strand, within Pf6N2E2_294 at 363.797 kb on - strand, within Pf6N2E2_294 at 363.808 kb on + strand, within Pf6N2E2_294 at 363.808 kb on + strand, within Pf6N2E2_294 at 363.809 kb on - strand, within Pf6N2E2_294 at 363.809 kb on - strand, within Pf6N2E2_294 at 363.972 kb on - strand, within Pf6N2E2_294 at 364.097 kb on - strand at 364.147 kb on + strand at 364.148 kb on - strand at 364.153 kb on + strand at 364.153 kb on + strand at 364.153 kb on + strand at 364.154 kb on - strand at 364.159 kb on + strand at 364.159 kb on + strand at 364.160 kb on - strand at 364.160 kb on - strand at 364.160 kb on - strand at 364.231 kb on + strand at 364.232 kb on - strand at 364.419 kb on + strand, within Pf6N2E2_295 at 364.427 kb on - strand, within Pf6N2E2_295 at 364.544 kb on - strand, within Pf6N2E2_295 at 364.606 kb on + strand, within Pf6N2E2_295 at 364.606 kb on + strand, within Pf6N2E2_295 at 364.768 kb on - strand, within Pf6N2E2_295 at 364.867 kb on - strand at 364.878 kb on + strand at 364.878 kb on + strand at 364.878 kb on + strand at 364.878 kb on + strand at 364.878 kb on + strand at 364.879 kb on - strand at 364.879 kb on - strand at 364.879 kb on - strand at 364.879 kb on - strand at 364.879 kb on - strand at 364.879 kb on - strand at 364.879 kb on - strand at 364.969 kb on + strand at 364.969 kb on + strand at 364.969 kb on + strand at 364.969 kb on + strand at 364.970 kb on - strand at 364.970 kb on - strand at 364.970 kb on - strand at 364.970 kb on - strand at 365.015 kb on + strand at 365.015 kb on + strand at 365.015 kb on + strand at 365.016 kb on - strand at 365.016 kb on - strand at 365.016 kb on - strand at 365.110 kb on - strand, within Pf6N2E2_296
Per-strain Table
Position Strand Gene LocusTag Fraction tungstate 0.05 M remove 362,907 - +0.2 362,907 - -0.1 363,396 - +0.1 363,396 - +0.3 363,402 - +0.7 363,402 - -1.3 363,402 - -0.1 363,404 - +0.2 363,479 - +0.4 363,517 + Pf6N2E2_294 0.14 -0.9 363,518 - Pf6N2E2_294 0.14 +1.5 363,518 - Pf6N2E2_294 0.14 -0.3 363,608 - Pf6N2E2_294 0.27 +0.5 363,608 - Pf6N2E2_294 0.27 +1.7 363,608 - Pf6N2E2_294 0.27 +0.4 363,616 + Pf6N2E2_294 0.28 +0.9 363,616 + Pf6N2E2_294 0.28 +0.9 363,616 + Pf6N2E2_294 0.28 +3.5 363,617 - Pf6N2E2_294 0.28 +0.2 363,692 - Pf6N2E2_294 0.39 -0.0 363,692 - Pf6N2E2_294 0.39 +0.7 363,754 + Pf6N2E2_294 0.48 -1.5 363,754 + Pf6N2E2_294 0.48 -1.0 363,754 + Pf6N2E2_294 0.48 -0.1 363,755 - Pf6N2E2_294 0.48 +1.0 363,755 - Pf6N2E2_294 0.48 +0.8 363,787 + Pf6N2E2_294 0.52 +0.7 363,787 + Pf6N2E2_294 0.52 +1.0 363,787 + Pf6N2E2_294 0.52 +0.9 363,787 + Pf6N2E2_294 0.52 +0.1 363,788 - Pf6N2E2_294 0.52 +2.0 363,797 - Pf6N2E2_294 0.54 +1.0 363,808 + Pf6N2E2_294 0.55 +0.0 363,808 + Pf6N2E2_294 0.55 +1.5 363,809 - Pf6N2E2_294 0.55 +1.0 363,809 - Pf6N2E2_294 0.55 +0.7 363,972 - Pf6N2E2_294 0.78 +0.5 364,097 - +1.2 364,147 + -0.4 364,148 - +1.3 364,153 + +0.6 364,153 + -0.3 364,153 + -1.3 364,154 - +0.1 364,159 + +0.2 364,159 + +0.5 364,160 - +2.5 364,160 - +0.4 364,160 - +1.0 364,231 + +1.7 364,232 - +1.5 364,419 + Pf6N2E2_295 0.35 -0.0 364,427 - Pf6N2E2_295 0.36 +0.1 364,544 - Pf6N2E2_295 0.53 -0.4 364,606 + Pf6N2E2_295 0.62 -1.0 364,606 + Pf6N2E2_295 0.62 +0.7 364,768 - Pf6N2E2_295 0.86 +0.5 364,867 - +0.8 364,878 + -0.5 364,878 + -0.6 364,878 + -0.1 364,878 + -0.2 364,878 + -0.1 364,879 - +0.9 364,879 - -1.3 364,879 - +0.4 364,879 - -0.4 364,879 - +0.8 364,879 - +0.2 364,879 - +1.0 364,969 + +0.4 364,969 + -1.6 364,969 + +1.2 364,969 + -0.4 364,970 - +0.9 364,970 - -0.1 364,970 - -0.1 364,970 - +0.4 365,015 + +1.0 365,015 + +0.6 365,015 + +0.0 365,016 - +0.6 365,016 - -0.5 365,016 - +1.2 365,110 - Pf6N2E2_296 0.17 +0.9
Or see this region's nucleotide sequence