Experiment: tungstate 0.05 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2393 and Pf6N2E2_2394 are separated by 187 nucleotides Pf6N2E2_2394 and Pf6N2E2_2395 are separated by 84 nucleotides
Pf6N2E2_2393 - Transcriptional regulator, LysR family, at 2,831,683 to 2,832,579
_2393
Pf6N2E2_2394 - FIG006220: Hypothetical MbtH-like protein, at 2,832,767 to 2,832,994
_2394
Pf6N2E2_2395 - Pyoverdin biosynthesis protein PvdH, L-2,4-diaminobutyrate:2-oxoglutarate aminotransferase (EC 2.6.1.76), at 2,833,079 to 2,834,491
_2395
Position (kb)
2832
2833 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2831.888 kb on - strand, within Pf6N2E2_2393 at 2831.888 kb on - strand, within Pf6N2E2_2393 at 2831.998 kb on + strand, within Pf6N2E2_2393 at 2831.998 kb on + strand, within Pf6N2E2_2393 at 2831.998 kb on + strand, within Pf6N2E2_2393 at 2831.998 kb on + strand, within Pf6N2E2_2393 at 2831.998 kb on + strand, within Pf6N2E2_2393 at 2831.999 kb on - strand, within Pf6N2E2_2393 at 2831.999 kb on - strand, within Pf6N2E2_2393 at 2831.999 kb on - strand, within Pf6N2E2_2393 at 2831.999 kb on - strand, within Pf6N2E2_2393 at 2831.999 kb on - strand, within Pf6N2E2_2393 at 2832.073 kb on - strand, within Pf6N2E2_2393 at 2832.371 kb on + strand, within Pf6N2E2_2393 at 2832.371 kb on + strand, within Pf6N2E2_2393 at 2832.371 kb on + strand, within Pf6N2E2_2393 at 2832.371 kb on + strand, within Pf6N2E2_2393 at 2832.371 kb on + strand, within Pf6N2E2_2393 at 2832.371 kb on + strand, within Pf6N2E2_2393 at 2832.371 kb on + strand, within Pf6N2E2_2393 at 2832.372 kb on - strand, within Pf6N2E2_2393 at 2832.372 kb on - strand, within Pf6N2E2_2393 at 2832.372 kb on - strand, within Pf6N2E2_2393 at 2832.372 kb on - strand, within Pf6N2E2_2393 at 2832.372 kb on - strand, within Pf6N2E2_2393 at 2832.372 kb on - strand, within Pf6N2E2_2393 at 2832.372 kb on - strand, within Pf6N2E2_2393 at 2832.372 kb on - strand, within Pf6N2E2_2393 at 2832.372 kb on - strand, within Pf6N2E2_2393 at 2832.421 kb on + strand, within Pf6N2E2_2393 at 2832.421 kb on + strand, within Pf6N2E2_2393 at 2832.421 kb on + strand, within Pf6N2E2_2393 at 2832.421 kb on + strand, within Pf6N2E2_2393 at 2832.421 kb on + strand, within Pf6N2E2_2393 at 2832.422 kb on - strand, within Pf6N2E2_2393 at 2832.422 kb on - strand, within Pf6N2E2_2393 at 2832.422 kb on - strand, within Pf6N2E2_2393 at 2832.585 kb on - strand at 2832.768 kb on + strand at 2832.769 kb on - strand at 2832.769 kb on - strand at 2832.846 kb on + strand, within Pf6N2E2_2394 at 2832.846 kb on + strand, within Pf6N2E2_2394 at 2832.846 kb on + strand, within Pf6N2E2_2394 at 2832.847 kb on - strand, within Pf6N2E2_2394 at 2832.847 kb on - strand, within Pf6N2E2_2394 at 2832.847 kb on - strand, within Pf6N2E2_2394 at 2832.847 kb on - strand, within Pf6N2E2_2394 at 2832.886 kb on + strand, within Pf6N2E2_2394 at 2832.913 kb on - strand, within Pf6N2E2_2394 at 2832.931 kb on - strand, within Pf6N2E2_2394 at 2832.983 kb on + strand at 2833.061 kb on + strand at 2833.080 kb on + strand at 2833.080 kb on + strand at 2833.081 kb on - strand at 2833.081 kb on - strand at 2833.827 kb on + strand, within Pf6N2E2_2395 at 2833.827 kb on + strand, within Pf6N2E2_2395 at 2833.893 kb on + strand, within Pf6N2E2_2395
Per-strain Table
Position Strand Gene LocusTag Fraction tungstate 0.05 M remove 2,831,888 - Pf6N2E2_2393 0.23 -0.9 2,831,888 - Pf6N2E2_2393 0.23 -1.0 2,831,998 + Pf6N2E2_2393 0.35 +2.0 2,831,998 + Pf6N2E2_2393 0.35 -0.7 2,831,998 + Pf6N2E2_2393 0.35 +0.1 2,831,998 + Pf6N2E2_2393 0.35 -1.5 2,831,998 + Pf6N2E2_2393 0.35 -0.4 2,831,999 - Pf6N2E2_2393 0.35 +0.0 2,831,999 - Pf6N2E2_2393 0.35 +0.6 2,831,999 - Pf6N2E2_2393 0.35 +0.8 2,831,999 - Pf6N2E2_2393 0.35 +0.6 2,831,999 - Pf6N2E2_2393 0.35 -0.1 2,832,073 - Pf6N2E2_2393 0.43 -1.3 2,832,371 + Pf6N2E2_2393 0.77 +0.2 2,832,371 + Pf6N2E2_2393 0.77 +0.0 2,832,371 + Pf6N2E2_2393 0.77 +0.7 2,832,371 + Pf6N2E2_2393 0.77 -0.3 2,832,371 + Pf6N2E2_2393 0.77 +0.7 2,832,371 + Pf6N2E2_2393 0.77 +0.8 2,832,371 + Pf6N2E2_2393 0.77 +0.1 2,832,372 - Pf6N2E2_2393 0.77 +0.5 2,832,372 - Pf6N2E2_2393 0.77 +0.8 2,832,372 - Pf6N2E2_2393 0.77 +0.6 2,832,372 - Pf6N2E2_2393 0.77 -0.9 2,832,372 - Pf6N2E2_2393 0.77 -0.0 2,832,372 - Pf6N2E2_2393 0.77 +0.8 2,832,372 - Pf6N2E2_2393 0.77 -2.2 2,832,372 - Pf6N2E2_2393 0.77 -0.9 2,832,372 - Pf6N2E2_2393 0.77 +1.4 2,832,421 + Pf6N2E2_2393 0.82 -1.1 2,832,421 + Pf6N2E2_2393 0.82 +0.5 2,832,421 + Pf6N2E2_2393 0.82 +0.7 2,832,421 + Pf6N2E2_2393 0.82 -0.2 2,832,421 + Pf6N2E2_2393 0.82 -0.0 2,832,422 - Pf6N2E2_2393 0.82 -0.1 2,832,422 - Pf6N2E2_2393 0.82 +0.5 2,832,422 - Pf6N2E2_2393 0.82 +0.6 2,832,585 - +1.4 2,832,768 + +1.5 2,832,769 - -0.3 2,832,769 - +0.6 2,832,846 + Pf6N2E2_2394 0.35 +1.7 2,832,846 + Pf6N2E2_2394 0.35 +0.9 2,832,846 + Pf6N2E2_2394 0.35 +1.0 2,832,847 - Pf6N2E2_2394 0.35 +1.4 2,832,847 - Pf6N2E2_2394 0.35 +2.2 2,832,847 - Pf6N2E2_2394 0.35 +0.8 2,832,847 - Pf6N2E2_2394 0.35 +2.3 2,832,886 + Pf6N2E2_2394 0.52 +0.5 2,832,913 - Pf6N2E2_2394 0.64 +1.5 2,832,931 - Pf6N2E2_2394 0.72 +0.7 2,832,983 + +0.9 2,833,061 + -1.4 2,833,080 + +1.5 2,833,080 + +0.3 2,833,081 - -0.3 2,833,081 - +1.7 2,833,827 + Pf6N2E2_2395 0.53 +0.7 2,833,827 + Pf6N2E2_2395 0.53 +0.5 2,833,893 + Pf6N2E2_2395 0.58 -0.2
Or see this region's nucleotide sequence