Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1969 and Ga0059261_1970 are separated by 149 nucleotides Ga0059261_1970 and Ga0059261_1971 are separated by 1 nucleotides
Ga0059261_1969: Ga0059261_1969 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 2,075,300 to 2,076,730
_1969
Ga0059261_1970: Ga0059261_1970 - Bacterial aa3 type cytochrome c oxidase subunit IV, at 2,076,880 to 2,077,005
_1970
Ga0059261_1971: Ga0059261_1971 - NAD/NADP transhydrogenase alpha subunit, at 2,077,007 to 2,078,128
_1971
Position (kb)
2076
2077
2078 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2076.589 kb on + strand at 2076.590 kb on - strand at 2076.590 kb on - strand at 2076.634 kb on + strand at 2076.634 kb on + strand at 2076.634 kb on + strand at 2076.635 kb on - strand at 2076.782 kb on - strand at 2076.782 kb on - strand at 2076.782 kb on - strand at 2076.794 kb on - strand at 2076.794 kb on - strand at 2076.794 kb on - strand at 2076.794 kb on - strand at 2076.831 kb on + strand at 2076.831 kb on + strand at 2076.832 kb on - strand at 2076.840 kb on + strand at 2076.840 kb on + strand at 2076.841 kb on - strand at 2076.841 kb on - strand at 2076.841 kb on - strand at 2076.875 kb on + strand at 2076.875 kb on + strand at 2076.875 kb on + strand at 2076.875 kb on + strand at 2076.875 kb on + strand at 2076.875 kb on + strand at 2076.875 kb on + strand at 2076.875 kb on + strand at 2076.876 kb on - strand at 2076.876 kb on - strand at 2076.876 kb on - strand at 2076.876 kb on - strand at 2076.876 kb on - strand at 2076.876 kb on - strand at 2076.876 kb on - strand at 2076.876 kb on - strand at 2076.919 kb on + strand, within Ga0059261_1970 at 2076.919 kb on + strand, within Ga0059261_1970 at 2076.919 kb on + strand, within Ga0059261_1970 at 2076.919 kb on + strand, within Ga0059261_1970 at 2076.919 kb on + strand, within Ga0059261_1970 at 2076.919 kb on + strand, within Ga0059261_1970 at 2076.919 kb on + strand, within Ga0059261_1970 at 2076.919 kb on + strand, within Ga0059261_1970 at 2076.919 kb on + strand, within Ga0059261_1970 at 2076.919 kb on + strand, within Ga0059261_1970 at 2076.919 kb on + strand at 2076.919 kb on + strand, within Ga0059261_1970 at 2076.919 kb on + strand, within Ga0059261_1970 at 2076.919 kb on + strand, within Ga0059261_1970 at 2076.919 kb on + strand, within Ga0059261_1970 at 2076.919 kb on + strand, within Ga0059261_1970 at 2076.919 kb on + strand, within Ga0059261_1970 at 2076.920 kb on - strand, within Ga0059261_1970 at 2076.920 kb on - strand, within Ga0059261_1970 at 2076.920 kb on - strand, within Ga0059261_1970 at 2076.920 kb on - strand, within Ga0059261_1970 at 2076.920 kb on - strand, within Ga0059261_1970 at 2076.920 kb on - strand, within Ga0059261_1970 at 2076.920 kb on - strand, within Ga0059261_1970 at 2076.920 kb on - strand, within Ga0059261_1970 at 2076.920 kb on - strand, within Ga0059261_1970 at 2076.920 kb on - strand, within Ga0059261_1970 at 2076.920 kb on - strand, within Ga0059261_1970 at 2076.920 kb on - strand, within Ga0059261_1970 at 2076.920 kb on - strand, within Ga0059261_1970 at 2076.920 kb on - strand, within Ga0059261_1970 at 2077.104 kb on + strand at 2077.104 kb on + strand at 2077.104 kb on + strand at 2077.105 kb on - strand at 2077.105 kb on - strand at 2077.105 kb on - strand at 2077.105 kb on - strand at 2077.322 kb on + strand, within Ga0059261_1971 at 2077.322 kb on + strand, within Ga0059261_1971 at 2077.323 kb on - strand, within Ga0059261_1971 at 2077.323 kb on - strand, within Ga0059261_1971 at 2077.323 kb on - strand, within Ga0059261_1971 at 2077.425 kb on - strand, within Ga0059261_1971 at 2077.454 kb on + strand, within Ga0059261_1971 at 2077.454 kb on + strand, within Ga0059261_1971 at 2077.454 kb on + strand at 2077.455 kb on - strand, within Ga0059261_1971 at 2077.455 kb on - strand, within Ga0059261_1971 at 2077.691 kb on + strand, within Ga0059261_1971 at 2077.692 kb on - strand, within Ga0059261_1971 at 2077.715 kb on + strand, within Ga0059261_1971 at 2077.715 kb on + strand, within Ga0059261_1971 at 2077.715 kb on + strand, within Ga0059261_1971 at 2077.716 kb on - strand, within Ga0059261_1971 at 2077.716 kb on - strand, within Ga0059261_1971 at 2077.716 kb on - strand, within Ga0059261_1971 at 2077.716 kb on - strand, within Ga0059261_1971
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,076,589 + +0.5 2,076,590 - -0.8 2,076,590 - -2.0 2,076,634 + -1.5 2,076,634 + +0.4 2,076,634 + +1.0 2,076,635 - +0.1 2,076,782 - -0.2 2,076,782 - -1.2 2,076,782 - +0.5 2,076,794 - +0.3 2,076,794 - +0.9 2,076,794 - +0.6 2,076,794 - +0.6 2,076,831 + +0.7 2,076,831 + +0.5 2,076,832 - -0.4 2,076,840 + -1.0 2,076,840 + -0.6 2,076,841 - +2.3 2,076,841 - -0.0 2,076,841 - +0.5 2,076,875 + +0.3 2,076,875 + -0.2 2,076,875 + -0.1 2,076,875 + -1.4 2,076,875 + +0.0 2,076,875 + +0.2 2,076,875 + +1.1 2,076,875 + +0.1 2,076,876 - -0.4 2,076,876 - -0.3 2,076,876 - -0.1 2,076,876 - +1.2 2,076,876 - +0.5 2,076,876 - +0.5 2,076,876 - +0.6 2,076,876 - -1.7 2,076,919 + Ga0059261_1970 0.31 -0.0 2,076,919 + Ga0059261_1970 0.31 -0.5 2,076,919 + Ga0059261_1970 0.31 +0.9 2,076,919 + Ga0059261_1970 0.31 -0.1 2,076,919 + Ga0059261_1970 0.31 +0.2 2,076,919 + Ga0059261_1970 0.31 +0.4 2,076,919 + Ga0059261_1970 0.31 -0.2 2,076,919 + Ga0059261_1970 0.31 -0.8 2,076,919 + Ga0059261_1970 0.31 +0.2 2,076,919 + Ga0059261_1970 0.31 +0.8 2,076,919 + +1.3 2,076,919 + Ga0059261_1970 0.31 -0.3 2,076,919 + Ga0059261_1970 0.31 -1.1 2,076,919 + Ga0059261_1970 0.31 +0.2 2,076,919 + Ga0059261_1970 0.31 -0.6 2,076,919 + Ga0059261_1970 0.31 -0.2 2,076,919 + Ga0059261_1970 0.31 -0.7 2,076,920 - Ga0059261_1970 0.32 +0.1 2,076,920 - Ga0059261_1970 0.32 +0.1 2,076,920 - Ga0059261_1970 0.32 -0.2 2,076,920 - Ga0059261_1970 0.32 -0.6 2,076,920 - Ga0059261_1970 0.32 -1.0 2,076,920 - Ga0059261_1970 0.32 -0.5 2,076,920 - Ga0059261_1970 0.32 +0.4 2,076,920 - Ga0059261_1970 0.32 -0.2 2,076,920 - Ga0059261_1970 0.32 -1.2 2,076,920 - Ga0059261_1970 0.32 -1.5 2,076,920 - Ga0059261_1970 0.32 +0.8 2,076,920 - Ga0059261_1970 0.32 -0.1 2,076,920 - Ga0059261_1970 0.32 -0.7 2,076,920 - Ga0059261_1970 0.32 -0.2 2,077,104 + -0.3 2,077,104 + -0.6 2,077,104 + +0.0 2,077,105 - +0.3 2,077,105 - -0.2 2,077,105 - +2.9 2,077,105 - +0.3 2,077,322 + Ga0059261_1971 0.28 -0.1 2,077,322 + Ga0059261_1971 0.28 -0.8 2,077,323 - Ga0059261_1971 0.28 +0.2 2,077,323 - Ga0059261_1971 0.28 -0.3 2,077,323 - Ga0059261_1971 0.28 -0.1 2,077,425 - Ga0059261_1971 0.37 +0.3 2,077,454 + Ga0059261_1971 0.40 +0.4 2,077,454 + Ga0059261_1971 0.40 -0.4 2,077,454 + +1.3 2,077,455 - Ga0059261_1971 0.40 -0.0 2,077,455 - Ga0059261_1971 0.40 +0.1 2,077,691 + Ga0059261_1971 0.61 -0.7 2,077,692 - Ga0059261_1971 0.61 -0.1 2,077,715 + Ga0059261_1971 0.63 -0.2 2,077,715 + Ga0059261_1971 0.63 +0.3 2,077,715 + Ga0059261_1971 0.63 -0.4 2,077,716 - Ga0059261_1971 0.63 +0.1 2,077,716 - Ga0059261_1971 0.63 -0.0 2,077,716 - Ga0059261_1971 0.63 +0.2 2,077,716 - Ga0059261_1971 0.63 +0.9
Or see this region's nucleotide sequence