Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0124 and Ga0059261_0125 are separated by 38 nucleotides Ga0059261_0125 and Ga0059261_0126 overlap by 4 nucleotides Ga0059261_0126 and Ga0059261_0127 are separated by 8 nucleotides
Ga0059261_0124: Ga0059261_0124 - DNA polymerase III, delta subunit, at 117,873 to 118,856
_0124
Ga0059261_0125: Ga0059261_0125 - methionyl-tRNA synthetase (EC 6.1.1.10), at 118,895 to 120,451
_0125
Ga0059261_0126: Ga0059261_0126 - hydrolase, TatD family, at 120,448 to 121,227
_0126
Ga0059261_0127: Ga0059261_0127 - Metal-dependent hydrolases of the beta-lactamase superfamily I, at 121,236 to 122,000
_0127
Position (kb)
118
119
120
121 Strain fitness (log2 ratio)
-2
-1
0
1 at 118.854 kb on + strand at 120.481 kb on + strand at 120.481 kb on + strand at 120.481 kb on + strand at 120.481 kb on + strand at 120.482 kb on - strand at 120.482 kb on - strand at 120.482 kb on - strand at 120.482 kb on - strand at 120.482 kb on - strand at 120.482 kb on - strand at 120.482 kb on - strand at 120.482 kb on - strand at 120.482 kb on - strand at 120.482 kb on - strand at 120.482 kb on - strand at 120.482 kb on - strand at 120.740 kb on - strand, within Ga0059261_0126 at 120.742 kb on + strand, within Ga0059261_0126 at 120.742 kb on + strand at 120.742 kb on + strand, within Ga0059261_0126 at 120.743 kb on - strand, within Ga0059261_0126 at 120.743 kb on - strand, within Ga0059261_0126 at 120.743 kb on - strand, within Ga0059261_0126 at 120.743 kb on - strand, within Ga0059261_0126 at 120.743 kb on - strand, within Ga0059261_0126 at 120.745 kb on + strand, within Ga0059261_0126 at 120.745 kb on + strand, within Ga0059261_0126 at 120.745 kb on + strand, within Ga0059261_0126 at 120.746 kb on - strand, within Ga0059261_0126 at 120.746 kb on - strand, within Ga0059261_0126 at 120.746 kb on - strand, within Ga0059261_0126 at 120.746 kb on - strand, within Ga0059261_0126 at 120.753 kb on + strand, within Ga0059261_0126 at 120.855 kb on + strand, within Ga0059261_0126 at 120.855 kb on + strand, within Ga0059261_0126 at 120.855 kb on + strand, within Ga0059261_0126 at 120.856 kb on - strand, within Ga0059261_0126 at 120.856 kb on - strand, within Ga0059261_0126 at 120.896 kb on - strand, within Ga0059261_0126 at 120.919 kb on - strand, within Ga0059261_0126 at 120.964 kb on + strand, within Ga0059261_0126 at 120.964 kb on + strand, within Ga0059261_0126 at 120.964 kb on + strand, within Ga0059261_0126 at 120.965 kb on - strand, within Ga0059261_0126 at 120.965 kb on - strand, within Ga0059261_0126 at 120.965 kb on - strand, within Ga0059261_0126 at 120.965 kb on - strand, within Ga0059261_0126 at 121.225 kb on + strand at 121.225 kb on + strand at 121.225 kb on + strand at 121.225 kb on + strand at 121.225 kb on + strand at 121.225 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 118,854 + -0.7 120,481 + +0.1 120,481 + +0.1 120,481 + +1.0 120,481 + -0.4 120,482 - +0.1 120,482 - -0.1 120,482 - +0.3 120,482 - +0.0 120,482 - +0.3 120,482 - -0.2 120,482 - +0.4 120,482 - +0.3 120,482 - -1.2 120,482 - +0.2 120,482 - +0.6 120,482 - +0.3 120,740 - Ga0059261_0126 0.37 +0.7 120,742 + Ga0059261_0126 0.38 +0.3 120,742 + +1.0 120,742 + Ga0059261_0126 0.38 -0.8 120,743 - Ga0059261_0126 0.38 -0.8 120,743 - Ga0059261_0126 0.38 +0.3 120,743 - Ga0059261_0126 0.38 +1.0 120,743 - Ga0059261_0126 0.38 -0.3 120,743 - Ga0059261_0126 0.38 -0.4 120,745 + Ga0059261_0126 0.38 -1.0 120,745 + Ga0059261_0126 0.38 -0.3 120,745 + Ga0059261_0126 0.38 +0.6 120,746 - Ga0059261_0126 0.38 -0.2 120,746 - Ga0059261_0126 0.38 +0.6 120,746 - Ga0059261_0126 0.38 -2.3 120,746 - Ga0059261_0126 0.38 -0.7 120,753 + Ga0059261_0126 0.39 +0.9 120,855 + Ga0059261_0126 0.52 -0.2 120,855 + Ga0059261_0126 0.52 +0.0 120,855 + Ga0059261_0126 0.52 +0.3 120,856 - Ga0059261_0126 0.52 +1.0 120,856 - Ga0059261_0126 0.52 +0.5 120,896 - Ga0059261_0126 0.57 -0.6 120,919 - Ga0059261_0126 0.60 +0.7 120,964 + Ga0059261_0126 0.66 -0.9 120,964 + Ga0059261_0126 0.66 +0.2 120,964 + Ga0059261_0126 0.66 +0.3 120,965 - Ga0059261_0126 0.66 +0.1 120,965 - Ga0059261_0126 0.66 -0.6 120,965 - Ga0059261_0126 0.66 -0.8 120,965 - Ga0059261_0126 0.66 +0.7 121,225 + +1.0 121,225 + +0.0 121,225 + +0.0 121,225 + -0.0 121,225 + +0.4 121,225 + -0.1
Or see this region's nucleotide sequence