Experiment: Adenine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1965 and Dshi_1966 are separated by 259 nucleotides Dshi_1966 and Dshi_1967 are separated by 12 nucleotides
Dshi_1965: Dshi_1965 - hypothetical protein (RefSeq), at 2,072,939 to 2,073,871
_1965
Dshi_1966: Dshi_1966 - dihydrolipoamide dehydrogenase (RefSeq), at 2,074,131 to 2,075,873
_1966
Dshi_1967: Dshi_1967 - catalytic domain of components of various dehydrogenase complexes (RefSeq), at 2,075,886 to 2,077,187
_1967
Position (kb)
2074
2075
2076 Strain fitness (log2 ratio)
-2
-1
0
1 at 2073.146 kb on + strand, within Dshi_1965 at 2073.302 kb on + strand, within Dshi_1965 at 2073.483 kb on + strand, within Dshi_1965 at 2073.491 kb on - strand, within Dshi_1965 at 2073.491 kb on - strand, within Dshi_1965 at 2073.491 kb on - strand, within Dshi_1965 at 2073.605 kb on + strand, within Dshi_1965 at 2073.683 kb on + strand, within Dshi_1965 at 2073.709 kb on - strand, within Dshi_1965 at 2073.838 kb on + strand at 2073.904 kb on - strand at 2073.952 kb on - strand at 2074.020 kb on - strand at 2074.119 kb on + strand at 2074.237 kb on + strand at 2074.237 kb on - strand at 2074.247 kb on + strand at 2074.259 kb on - strand at 2074.288 kb on - strand at 2074.447 kb on + strand, within Dshi_1966 at 2074.479 kb on + strand, within Dshi_1966 at 2074.508 kb on - strand, within Dshi_1966 at 2074.542 kb on - strand, within Dshi_1966 at 2074.576 kb on + strand, within Dshi_1966 at 2074.586 kb on - strand, within Dshi_1966 at 2074.635 kb on + strand, within Dshi_1966 at 2074.656 kb on - strand, within Dshi_1966 at 2074.784 kb on + strand at 2074.819 kb on - strand, within Dshi_1966 at 2074.847 kb on + strand, within Dshi_1966 at 2075.035 kb on - strand, within Dshi_1966 at 2075.060 kb on + strand, within Dshi_1966 at 2075.068 kb on - strand, within Dshi_1966 at 2075.149 kb on - strand, within Dshi_1966 at 2075.223 kb on + strand, within Dshi_1966 at 2075.240 kb on - strand, within Dshi_1966 at 2075.882 kb on + strand at 2075.961 kb on - strand at 2075.972 kb on + strand at 2076.033 kb on - strand, within Dshi_1967 at 2076.092 kb on + strand, within Dshi_1967 at 2076.160 kb on - strand, within Dshi_1967 at 2076.160 kb on - strand, within Dshi_1967 at 2076.234 kb on - strand, within Dshi_1967 at 2076.281 kb on + strand, within Dshi_1967 at 2076.289 kb on - strand, within Dshi_1967 at 2076.363 kb on + strand, within Dshi_1967 at 2076.424 kb on + strand, within Dshi_1967 at 2076.424 kb on + strand, within Dshi_1967 at 2076.432 kb on - strand, within Dshi_1967 at 2076.432 kb on - strand, within Dshi_1967 at 2076.787 kb on - strand, within Dshi_1967 at 2076.791 kb on - strand, within Dshi_1967
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (N) remove 2,073,146 + Dshi_1965 0.22 +0.3 2,073,302 + Dshi_1965 0.39 -0.1 2,073,483 + Dshi_1965 0.58 -0.4 2,073,491 - Dshi_1965 0.59 +0.3 2,073,491 - Dshi_1965 0.59 -0.4 2,073,491 - Dshi_1965 0.59 -1.3 2,073,605 + Dshi_1965 0.71 -0.3 2,073,683 + Dshi_1965 0.80 -1.4 2,073,709 - Dshi_1965 0.83 -0.1 2,073,838 + +0.5 2,073,904 - -0.7 2,073,952 - +0.2 2,074,020 - +0.3 2,074,119 + -1.1 2,074,237 + +0.5 2,074,237 - -0.1 2,074,247 + -0.2 2,074,259 - -0.3 2,074,288 - -2.1 2,074,447 + Dshi_1966 0.18 -1.6 2,074,479 + Dshi_1966 0.20 -0.8 2,074,508 - Dshi_1966 0.22 -0.2 2,074,542 - Dshi_1966 0.24 -1.1 2,074,576 + Dshi_1966 0.26 -0.6 2,074,586 - Dshi_1966 0.26 -1.0 2,074,635 + Dshi_1966 0.29 -1.1 2,074,656 - Dshi_1966 0.30 -1.3 2,074,784 + -2.0 2,074,819 - Dshi_1966 0.39 -0.5 2,074,847 + Dshi_1966 0.41 -0.5 2,075,035 - Dshi_1966 0.52 -0.7 2,075,060 + Dshi_1966 0.53 -0.8 2,075,068 - Dshi_1966 0.54 -0.5 2,075,149 - Dshi_1966 0.58 +0.6 2,075,223 + Dshi_1966 0.63 -1.0 2,075,240 - Dshi_1966 0.64 -1.3 2,075,882 + -0.4 2,075,961 - -0.7 2,075,972 + -1.6 2,076,033 - Dshi_1967 0.11 -0.7 2,076,092 + Dshi_1967 0.16 -0.8 2,076,160 - Dshi_1967 0.21 -0.3 2,076,160 - Dshi_1967 0.21 -1.6 2,076,234 - Dshi_1967 0.27 -1.6 2,076,281 + Dshi_1967 0.30 -0.3 2,076,289 - Dshi_1967 0.31 -0.3 2,076,363 + Dshi_1967 0.37 -1.0 2,076,424 + Dshi_1967 0.41 -0.4 2,076,424 + Dshi_1967 0.41 -1.8 2,076,432 - Dshi_1967 0.42 -0.9 2,076,432 - Dshi_1967 0.42 -1.3 2,076,787 - Dshi_1967 0.69 -1.0 2,076,791 - Dshi_1967 0.70 +0.1
Or see this region's nucleotide sequence