Experiment: Fluorophosphate 0.125 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5054 and Pf6N2E2_5055 are separated by 252 nucleotides Pf6N2E2_5055 and Pf6N2E2_5056 are separated by 167 nucleotides
Pf6N2E2_5054 - YpfJ protein, zinc metalloprotease superfamily, at 5,828,632 to 5,829,516
_5054
Pf6N2E2_5055 - membrane protein, putative, at 5,829,769 to 5,830,647
_5055
Pf6N2E2_5056 - Hexuronate transporter, at 5,830,815 to 5,832,152
_5056
Position (kb)
5829
5830
5831 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 5828.902 kb on + strand, within Pf6N2E2_5054 at 5828.903 kb on - strand, within Pf6N2E2_5054 at 5828.903 kb on - strand, within Pf6N2E2_5054 at 5829.018 kb on - strand, within Pf6N2E2_5054 at 5829.086 kb on + strand, within Pf6N2E2_5054 at 5829.086 kb on + strand, within Pf6N2E2_5054 at 5829.087 kb on - strand, within Pf6N2E2_5054 at 5829.110 kb on + strand, within Pf6N2E2_5054 at 5829.110 kb on + strand, within Pf6N2E2_5054 at 5829.110 kb on + strand, within Pf6N2E2_5054 at 5829.111 kb on - strand, within Pf6N2E2_5054 at 5829.111 kb on - strand, within Pf6N2E2_5054 at 5829.111 kb on - strand, within Pf6N2E2_5054 at 5829.111 kb on - strand, within Pf6N2E2_5054 at 5829.512 kb on - strand at 5829.577 kb on + strand at 5829.578 kb on - strand at 5829.676 kb on - strand at 5829.702 kb on - strand at 5829.719 kb on - strand at 5829.743 kb on + strand at 5829.743 kb on + strand at 5829.744 kb on - strand at 5829.744 kb on - strand at 5829.744 kb on - strand at 5829.744 kb on - strand at 5829.744 kb on - strand at 5829.826 kb on - strand at 5829.866 kb on + strand, within Pf6N2E2_5055 at 5829.866 kb on + strand, within Pf6N2E2_5055 at 5829.874 kb on + strand, within Pf6N2E2_5055 at 5829.875 kb on - strand, within Pf6N2E2_5055 at 5829.875 kb on - strand, within Pf6N2E2_5055 at 5829.875 kb on - strand, within Pf6N2E2_5055 at 5829.875 kb on - strand, within Pf6N2E2_5055 at 5829.875 kb on - strand, within Pf6N2E2_5055 at 5829.875 kb on - strand, within Pf6N2E2_5055 at 5829.919 kb on + strand, within Pf6N2E2_5055 at 5829.919 kb on + strand, within Pf6N2E2_5055 at 5829.919 kb on + strand, within Pf6N2E2_5055 at 5829.919 kb on + strand, within Pf6N2E2_5055 at 5829.919 kb on + strand, within Pf6N2E2_5055 at 5829.919 kb on + strand, within Pf6N2E2_5055 at 5829.920 kb on - strand, within Pf6N2E2_5055 at 5829.920 kb on - strand, within Pf6N2E2_5055 at 5829.980 kb on + strand, within Pf6N2E2_5055 at 5829.981 kb on - strand, within Pf6N2E2_5055 at 5829.981 kb on - strand, within Pf6N2E2_5055 at 5829.984 kb on + strand, within Pf6N2E2_5055 at 5829.985 kb on - strand, within Pf6N2E2_5055 at 5829.985 kb on - strand, within Pf6N2E2_5055 at 5829.985 kb on - strand, within Pf6N2E2_5055 at 5830.189 kb on - strand, within Pf6N2E2_5055 at 5830.279 kb on + strand, within Pf6N2E2_5055 at 5830.279 kb on + strand, within Pf6N2E2_5055 at 5830.279 kb on + strand, within Pf6N2E2_5055 at 5830.279 kb on + strand, within Pf6N2E2_5055 at 5830.280 kb on - strand, within Pf6N2E2_5055 at 5830.280 kb on - strand, within Pf6N2E2_5055 at 5830.280 kb on - strand, within Pf6N2E2_5055 at 5830.280 kb on - strand, within Pf6N2E2_5055 at 5830.280 kb on - strand, within Pf6N2E2_5055 at 5830.282 kb on - strand, within Pf6N2E2_5055 at 5830.855 kb on + strand at 5830.855 kb on + strand at 5830.855 kb on + strand at 5830.855 kb on + strand at 5830.856 kb on - strand at 5830.856 kb on - strand at 5830.856 kb on - strand at 5830.856 kb on - strand at 5830.879 kb on + strand at 5830.879 kb on + strand at 5830.879 kb on + strand at 5830.880 kb on - strand at 5830.880 kb on - strand at 5830.912 kb on + strand at 5830.912 kb on + strand at 5830.912 kb on + strand at 5830.913 kb on - strand at 5830.913 kb on - strand at 5830.913 kb on - strand at 5830.913 kb on - strand at 5830.913 kb on - strand at 5830.913 kb on - strand at 5830.916 kb on + strand at 5830.916 kb on + strand at 5830.916 kb on + strand at 5830.916 kb on + strand at 5830.916 kb on + strand at 5830.917 kb on - strand at 5831.029 kb on + strand, within Pf6N2E2_5056 at 5831.029 kb on + strand, within Pf6N2E2_5056 at 5831.030 kb on - strand, within Pf6N2E2_5056 at 5831.030 kb on - strand, within Pf6N2E2_5056 at 5831.030 kb on - strand, within Pf6N2E2_5056 at 5831.266 kb on + strand, within Pf6N2E2_5056 at 5831.317 kb on + strand, within Pf6N2E2_5056 at 5831.317 kb on + strand, within Pf6N2E2_5056 at 5831.317 kb on + strand, within Pf6N2E2_5056 at 5831.318 kb on - strand, within Pf6N2E2_5056 at 5831.318 kb on - strand, within Pf6N2E2_5056 at 5831.318 kb on - strand, within Pf6N2E2_5056 at 5831.347 kb on + strand, within Pf6N2E2_5056 at 5831.348 kb on - strand, within Pf6N2E2_5056 at 5831.348 kb on - strand, within Pf6N2E2_5056 at 5831.348 kb on - strand, within Pf6N2E2_5056 at 5831.353 kb on + strand, within Pf6N2E2_5056 at 5831.353 kb on + strand, within Pf6N2E2_5056 at 5831.353 kb on + strand, within Pf6N2E2_5056 at 5831.353 kb on + strand, within Pf6N2E2_5056 at 5831.354 kb on - strand, within Pf6N2E2_5056 at 5831.354 kb on - strand, within Pf6N2E2_5056 at 5831.354 kb on - strand, within Pf6N2E2_5056 at 5831.354 kb on - strand, within Pf6N2E2_5056 at 5831.354 kb on - strand, within Pf6N2E2_5056 at 5831.354 kb on - strand, within Pf6N2E2_5056 at 5831.473 kb on + strand, within Pf6N2E2_5056 at 5831.473 kb on + strand, within Pf6N2E2_5056 at 5831.473 kb on + strand, within Pf6N2E2_5056 at 5831.474 kb on - strand, within Pf6N2E2_5056 at 5831.474 kb on - strand, within Pf6N2E2_5056 at 5831.521 kb on + strand, within Pf6N2E2_5056 at 5831.522 kb on - strand, within Pf6N2E2_5056
Per-strain Table
Position Strand Gene LocusTag Fraction Fluorophosphate 0.125 M remove 5,828,902 + Pf6N2E2_5054 0.31 +1.7 5,828,903 - Pf6N2E2_5054 0.31 -0.6 5,828,903 - Pf6N2E2_5054 0.31 -0.1 5,829,018 - Pf6N2E2_5054 0.44 -1.0 5,829,086 + Pf6N2E2_5054 0.51 +0.1 5,829,086 + Pf6N2E2_5054 0.51 -2.1 5,829,087 - Pf6N2E2_5054 0.51 +0.3 5,829,110 + Pf6N2E2_5054 0.54 +0.1 5,829,110 + Pf6N2E2_5054 0.54 -0.5 5,829,110 + Pf6N2E2_5054 0.54 +0.2 5,829,111 - Pf6N2E2_5054 0.54 -0.7 5,829,111 - Pf6N2E2_5054 0.54 -0.7 5,829,111 - Pf6N2E2_5054 0.54 -0.1 5,829,111 - Pf6N2E2_5054 0.54 +1.4 5,829,512 - +0.8 5,829,577 + +0.7 5,829,578 - +1.1 5,829,676 - -0.9 5,829,702 - -0.6 5,829,719 - -0.5 5,829,743 + +0.2 5,829,743 + +0.9 5,829,744 - +0.8 5,829,744 - +0.5 5,829,744 - +1.5 5,829,744 - -1.0 5,829,744 - +0.6 5,829,826 - +0.3 5,829,866 + Pf6N2E2_5055 0.11 -0.1 5,829,866 + Pf6N2E2_5055 0.11 -1.3 5,829,874 + Pf6N2E2_5055 0.12 -1.2 5,829,875 - Pf6N2E2_5055 0.12 +0.2 5,829,875 - Pf6N2E2_5055 0.12 +0.5 5,829,875 - Pf6N2E2_5055 0.12 +0.5 5,829,875 - Pf6N2E2_5055 0.12 -1.2 5,829,875 - Pf6N2E2_5055 0.12 -0.2 5,829,875 - Pf6N2E2_5055 0.12 -0.2 5,829,919 + Pf6N2E2_5055 0.17 -0.5 5,829,919 + Pf6N2E2_5055 0.17 -1.6 5,829,919 + Pf6N2E2_5055 0.17 +1.0 5,829,919 + Pf6N2E2_5055 0.17 +0.2 5,829,919 + Pf6N2E2_5055 0.17 +1.0 5,829,919 + Pf6N2E2_5055 0.17 -1.6 5,829,920 - Pf6N2E2_5055 0.17 +0.1 5,829,920 - Pf6N2E2_5055 0.17 +0.8 5,829,980 + Pf6N2E2_5055 0.24 +0.1 5,829,981 - Pf6N2E2_5055 0.24 -1.4 5,829,981 - Pf6N2E2_5055 0.24 -0.9 5,829,984 + Pf6N2E2_5055 0.24 -0.8 5,829,985 - Pf6N2E2_5055 0.25 -2.1 5,829,985 - Pf6N2E2_5055 0.25 -0.7 5,829,985 - Pf6N2E2_5055 0.25 -0.4 5,830,189 - Pf6N2E2_5055 0.48 -0.4 5,830,279 + Pf6N2E2_5055 0.58 +0.6 5,830,279 + Pf6N2E2_5055 0.58 -1.9 5,830,279 + Pf6N2E2_5055 0.58 -0.6 5,830,279 + Pf6N2E2_5055 0.58 -0.2 5,830,280 - Pf6N2E2_5055 0.58 +0.6 5,830,280 - Pf6N2E2_5055 0.58 -0.6 5,830,280 - Pf6N2E2_5055 0.58 -1.2 5,830,280 - Pf6N2E2_5055 0.58 +2.0 5,830,280 - Pf6N2E2_5055 0.58 +0.7 5,830,282 - Pf6N2E2_5055 0.58 +0.9 5,830,855 + +0.5 5,830,855 + -1.0 5,830,855 + -0.2 5,830,855 + -0.1 5,830,856 - -0.8 5,830,856 - -1.3 5,830,856 - -0.0 5,830,856 - +0.3 5,830,879 + -1.4 5,830,879 + +0.2 5,830,879 + +0.7 5,830,880 - -0.3 5,830,880 - -0.1 5,830,912 + +0.5 5,830,912 + +1.2 5,830,912 + -1.1 5,830,913 - +1.1 5,830,913 - +0.3 5,830,913 - -0.9 5,830,913 - +0.2 5,830,913 - +0.1 5,830,913 - -0.2 5,830,916 + +1.1 5,830,916 + +0.1 5,830,916 + +0.3 5,830,916 + -0.1 5,830,916 + -0.7 5,830,917 - +0.1 5,831,029 + Pf6N2E2_5056 0.16 +0.3 5,831,029 + Pf6N2E2_5056 0.16 -0.5 5,831,030 - Pf6N2E2_5056 0.16 -0.8 5,831,030 - Pf6N2E2_5056 0.16 -1.7 5,831,030 - Pf6N2E2_5056 0.16 -0.9 5,831,266 + Pf6N2E2_5056 0.34 +0.2 5,831,317 + Pf6N2E2_5056 0.38 -0.1 5,831,317 + Pf6N2E2_5056 0.38 +0.3 5,831,317 + Pf6N2E2_5056 0.38 -0.4 5,831,318 - Pf6N2E2_5056 0.38 -0.1 5,831,318 - Pf6N2E2_5056 0.38 -0.4 5,831,318 - Pf6N2E2_5056 0.38 +0.7 5,831,347 + Pf6N2E2_5056 0.40 +0.2 5,831,348 - Pf6N2E2_5056 0.40 -0.3 5,831,348 - Pf6N2E2_5056 0.40 -2.4 5,831,348 - Pf6N2E2_5056 0.40 -0.6 5,831,353 + Pf6N2E2_5056 0.40 -1.2 5,831,353 + Pf6N2E2_5056 0.40 +0.5 5,831,353 + Pf6N2E2_5056 0.40 -0.5 5,831,353 + Pf6N2E2_5056 0.40 +0.2 5,831,354 - Pf6N2E2_5056 0.40 -0.2 5,831,354 - Pf6N2E2_5056 0.40 +3.8 5,831,354 - Pf6N2E2_5056 0.40 -0.6 5,831,354 - Pf6N2E2_5056 0.40 -0.2 5,831,354 - Pf6N2E2_5056 0.40 -0.7 5,831,354 - Pf6N2E2_5056 0.40 +0.4 5,831,473 + Pf6N2E2_5056 0.49 -1.3 5,831,473 + Pf6N2E2_5056 0.49 -0.1 5,831,473 + Pf6N2E2_5056 0.49 -0.7 5,831,474 - Pf6N2E2_5056 0.49 +0.4 5,831,474 - Pf6N2E2_5056 0.49 -0.1 5,831,521 + Pf6N2E2_5056 0.53 +0.8 5,831,522 - Pf6N2E2_5056 0.53 -0.5
Or see this region's nucleotide sequence