Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4768

Experiment: Fluorophosphate 0.125 M

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntPf6N2E2_4767 and Pf6N2E2_4768 are separated by 91 nucleotidesPf6N2E2_4768 and Pf6N2E2_4769 are separated by 246 nucleotides Pf6N2E2_4767 - GGDEF domain protein, at 5,505,501 to 5,506,817 _4767 Pf6N2E2_4768 - Acyl-CoA dehydrogenase (EC 1.3.8.7), at 5,506,909 to 5,508,705 _4768 Pf6N2E2_4769 - Acyl-CoA dehydrogenase (EC 1.3.8.7), at 5,508,952 to 5,510,730 _4769 Position (kb) 5506 5507 5508 5509Strain fitness (log2 ratio) -2 -1 0 1 2 3at 5505.960 kb on + strand, within Pf6N2E2_4767at 5505.961 kb on - strand, within Pf6N2E2_4767at 5506.045 kb on - strand, within Pf6N2E2_4767at 5506.086 kb on + strand, within Pf6N2E2_4767at 5506.087 kb on - strand, within Pf6N2E2_4767at 5506.087 kb on - strand, within Pf6N2E2_4767at 5506.087 kb on - strand, within Pf6N2E2_4767at 5506.243 kb on - strand, within Pf6N2E2_4767at 5506.326 kb on + strand, within Pf6N2E2_4767at 5506.326 kb on + strand, within Pf6N2E2_4767at 5506.326 kb on + strand, within Pf6N2E2_4767at 5506.326 kb on + strand, within Pf6N2E2_4767at 5506.326 kb on + strand, within Pf6N2E2_4767at 5506.326 kb on + strand, within Pf6N2E2_4767at 5506.327 kb on - strand, within Pf6N2E2_4767at 5506.327 kb on - strand, within Pf6N2E2_4767at 5506.327 kb on - strand, within Pf6N2E2_4767at 5506.327 kb on - strand, within Pf6N2E2_4767at 5506.327 kb on - strand, within Pf6N2E2_4767at 5506.327 kb on - strand, within Pf6N2E2_4767at 5506.327 kb on - strand, within Pf6N2E2_4767at 5506.327 kb on - strand, within Pf6N2E2_4767at 5506.554 kb on + strand, within Pf6N2E2_4767at 5506.554 kb on + strand, within Pf6N2E2_4767at 5506.554 kb on + strand, within Pf6N2E2_4767at 5506.554 kb on + strand, within Pf6N2E2_4767at 5506.554 kb on + strand, within Pf6N2E2_4767at 5506.554 kb on + strand, within Pf6N2E2_4767at 5506.555 kb on - strand, within Pf6N2E2_4767at 5506.555 kb on - strand, within Pf6N2E2_4767at 5506.555 kb on - strand, within Pf6N2E2_4767at 5506.555 kb on - strand, within Pf6N2E2_4767at 5506.555 kb on - strand, within Pf6N2E2_4767at 5506.555 kb on - strand, within Pf6N2E2_4767at 5506.555 kb on - strand, within Pf6N2E2_4767at 5506.555 kb on - strand, within Pf6N2E2_4767at 5506.728 kb on + strandat 5506.729 kb on - strandat 5506.751 kb on + strandat 5506.751 kb on + strandat 5506.752 kb on - strandat 5506.874 kb on + strandat 5506.874 kb on + strandat 5506.875 kb on - strandat 5506.918 kb on + strandat 5506.981 kb on + strandat 5507.120 kb on + strand, within Pf6N2E2_4768at 5507.120 kb on + strand, within Pf6N2E2_4768at 5507.120 kb on + strand, within Pf6N2E2_4768at 5507.120 kb on + strand, within Pf6N2E2_4768at 5507.120 kb on + strand, within Pf6N2E2_4768at 5507.121 kb on - strand, within Pf6N2E2_4768at 5507.121 kb on - strand, within Pf6N2E2_4768at 5507.121 kb on - strand, within Pf6N2E2_4768at 5507.161 kb on + strand, within Pf6N2E2_4768at 5507.161 kb on + strand, within Pf6N2E2_4768at 5507.161 kb on + strand, within Pf6N2E2_4768at 5507.161 kb on + strand, within Pf6N2E2_4768at 5507.161 kb on + strand, within Pf6N2E2_4768at 5507.161 kb on + strand, within Pf6N2E2_4768at 5507.162 kb on - strand, within Pf6N2E2_4768at 5507.162 kb on - strand, within Pf6N2E2_4768at 5507.162 kb on - strand, within Pf6N2E2_4768at 5507.162 kb on - strand, within Pf6N2E2_4768at 5507.162 kb on - strand, within Pf6N2E2_4768at 5507.162 kb on - strand, within Pf6N2E2_4768at 5507.162 kb on - strand, within Pf6N2E2_4768at 5507.162 kb on - strand, within Pf6N2E2_4768at 5507.162 kb on - strand, within Pf6N2E2_4768at 5507.223 kb on + strand, within Pf6N2E2_4768at 5507.223 kb on + strand, within Pf6N2E2_4768at 5507.223 kb on + strand, within Pf6N2E2_4768at 5507.224 kb on - strand, within Pf6N2E2_4768at 5507.224 kb on - strand, within Pf6N2E2_4768at 5507.284 kb on + strand, within Pf6N2E2_4768at 5507.284 kb on + strand, within Pf6N2E2_4768at 5507.285 kb on - strand, within Pf6N2E2_4768at 5507.285 kb on - strand, within Pf6N2E2_4768at 5507.285 kb on - strand, within Pf6N2E2_4768at 5507.285 kb on - strand, within Pf6N2E2_4768at 5507.353 kb on + strand, within Pf6N2E2_4768at 5507.353 kb on + strand, within Pf6N2E2_4768at 5507.353 kb on + strand, within Pf6N2E2_4768at 5507.353 kb on + strand, within Pf6N2E2_4768at 5507.354 kb on - strand, within Pf6N2E2_4768at 5507.354 kb on - strand, within Pf6N2E2_4768at 5507.354 kb on - strand, within Pf6N2E2_4768at 5507.854 kb on + strand, within Pf6N2E2_4768at 5507.998 kb on + strand, within Pf6N2E2_4768at 5507.998 kb on + strand, within Pf6N2E2_4768at 5507.998 kb on + strand, within Pf6N2E2_4768at 5508.223 kb on + strand, within Pf6N2E2_4768at 5508.223 kb on + strand, within Pf6N2E2_4768at 5508.223 kb on + strandat 5508.223 kb on + strand, within Pf6N2E2_4768at 5508.223 kb on + strand, within Pf6N2E2_4768at 5508.223 kb on + strand, within Pf6N2E2_4768at 5508.223 kb on + strand, within Pf6N2E2_4768at 5508.223 kb on + strand, within Pf6N2E2_4768at 5508.223 kb on + strand, within Pf6N2E2_4768at 5508.224 kb on - strand, within Pf6N2E2_4768at 5508.224 kb on - strand, within Pf6N2E2_4768at 5508.224 kb on - strand, within Pf6N2E2_4768at 5508.224 kb on - strand, within Pf6N2E2_4768at 5508.224 kb on - strand, within Pf6N2E2_4768at 5508.224 kb on - strand, within Pf6N2E2_4768at 5508.224 kb on - strand, within Pf6N2E2_4768at 5508.224 kb on - strand, within Pf6N2E2_4768at 5508.257 kb on + strand, within Pf6N2E2_4768at 5508.257 kb on + strand, within Pf6N2E2_4768at 5508.257 kb on + strand, within Pf6N2E2_4768at 5508.258 kb on - strand, within Pf6N2E2_4768at 5508.258 kb on - strand, within Pf6N2E2_4768at 5508.321 kb on + strand, within Pf6N2E2_4768at 5508.321 kb on + strand, within Pf6N2E2_4768at 5508.321 kb on + strand, within Pf6N2E2_4768at 5508.322 kb on - strand, within Pf6N2E2_4768at 5508.322 kb on - strand, within Pf6N2E2_4768at 5508.322 kb on - strand, within Pf6N2E2_4768at 5508.364 kb on + strand, within Pf6N2E2_4768at 5508.364 kb on + strand, within Pf6N2E2_4768at 5508.364 kb on + strand, within Pf6N2E2_4768at 5508.364 kb on + strand, within Pf6N2E2_4768at 5508.365 kb on - strand, within Pf6N2E2_4768at 5508.472 kb on + strand, within Pf6N2E2_4768at 5508.472 kb on + strand, within Pf6N2E2_4768at 5508.472 kb on + strand, within Pf6N2E2_4768at 5508.481 kb on + strand, within Pf6N2E2_4768at 5508.481 kb on + strand, within Pf6N2E2_4768at 5508.490 kb on + strand, within Pf6N2E2_4768at 5508.490 kb on + strand, within Pf6N2E2_4768at 5508.491 kb on - strand, within Pf6N2E2_4768at 5508.491 kb on - strand, within Pf6N2E2_4768at 5508.491 kb on - strand, within Pf6N2E2_4768at 5508.505 kb on + strand, within Pf6N2E2_4768at 5508.505 kb on + strand, within Pf6N2E2_4768at 5508.506 kb on - strand, within Pf6N2E2_4768at 5508.506 kb on - strand, within Pf6N2E2_4768at 5508.506 kb on - strand, within Pf6N2E2_4768at 5508.604 kb on + strandat 5508.604 kb on + strandat 5508.604 kb on + strandat 5508.605 kb on - strandat 5508.628 kb on - strandat 5508.628 kb on - strandat 5508.821 kb on - strandat 5508.902 kb on + strandat 5508.903 kb on - strandat 5508.903 kb on - strandat 5508.903 kb on - strandat 5508.932 kb on + strandat 5508.932 kb on + strandat 5508.932 kb on + strandat 5508.961 kb on + strandat 5508.962 kb on - strandat 5509.201 kb on + strand, within Pf6N2E2_4769at 5509.201 kb on + strand, within Pf6N2E2_4769at 5509.201 kb on + strand, within Pf6N2E2_4769at 5509.202 kb on - strand, within Pf6N2E2_4769at 5509.202 kb on - strand, within Pf6N2E2_4769at 5509.210 kb on + strand, within Pf6N2E2_4769at 5509.210 kb on + strand, within Pf6N2E2_4769at 5509.210 kb on + strand, within Pf6N2E2_4769at 5509.210 kb on + strand, within Pf6N2E2_4769at 5509.210 kb on + strand, within Pf6N2E2_4769at 5509.252 kb on + strand, within Pf6N2E2_4769at 5509.402 kb on + strand, within Pf6N2E2_4769at 5509.403 kb on - strand, within Pf6N2E2_4769at 5509.417 kb on + strand, within Pf6N2E2_4769at 5509.418 kb on - strand, within Pf6N2E2_4769at 5509.418 kb on - strand, within Pf6N2E2_4769at 5509.418 kb on - strand, within Pf6N2E2_4769at 5509.418 kb on - strand, within Pf6N2E2_4769at 5509.418 kb on - strand, within Pf6N2E2_4769at 5509.418 kb on - strand, within Pf6N2E2_4769at 5509.418 kb on - strand, within Pf6N2E2_4769at 5509.418 kb on - strand, within Pf6N2E2_4769at 5509.418 kb on - strand, within Pf6N2E2_4769at 5509.519 kb on + strand, within Pf6N2E2_4769at 5509.519 kb on + strand, within Pf6N2E2_4769at 5509.519 kb on + strand, within Pf6N2E2_4769at 5509.519 kb on + strand, within Pf6N2E2_4769at 5509.519 kb on + strand, within Pf6N2E2_4769at 5509.519 kb on + strand, within Pf6N2E2_4769at 5509.520 kb on - strand, within Pf6N2E2_4769at 5509.520 kb on - strand, within Pf6N2E2_4769at 5509.520 kb on - strand, within Pf6N2E2_4769at 5509.520 kb on - strand, within Pf6N2E2_4769at 5509.520 kb on - strand, within Pf6N2E2_4769

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Fluorophosphate 0.125 M
remove
5,505,960 + Pf6N2E2_4767 0.35 +1.0
5,505,961 - Pf6N2E2_4767 0.35 -0.6
5,506,045 - Pf6N2E2_4767 0.41 +1.0
5,506,086 + Pf6N2E2_4767 0.44 +0.1
5,506,087 - Pf6N2E2_4767 0.44 +0.3
5,506,087 - Pf6N2E2_4767 0.44 -1.2
5,506,087 - Pf6N2E2_4767 0.44 +0.8
5,506,243 - Pf6N2E2_4767 0.56 +1.7
5,506,326 + Pf6N2E2_4767 0.63 +0.2
5,506,326 + Pf6N2E2_4767 0.63 +0.6
5,506,326 + Pf6N2E2_4767 0.63 +0.1
5,506,326 + Pf6N2E2_4767 0.63 +0.5
5,506,326 + Pf6N2E2_4767 0.63 -1.9
5,506,326 + Pf6N2E2_4767 0.63 -0.1
5,506,327 - Pf6N2E2_4767 0.63 +0.4
5,506,327 - Pf6N2E2_4767 0.63 +0.8
5,506,327 - Pf6N2E2_4767 0.63 +0.3
5,506,327 - Pf6N2E2_4767 0.63 +0.4
5,506,327 - Pf6N2E2_4767 0.63 +1.3
5,506,327 - Pf6N2E2_4767 0.63 -0.2
5,506,327 - Pf6N2E2_4767 0.63 -0.1
5,506,327 - Pf6N2E2_4767 0.63 +0.1
5,506,554 + Pf6N2E2_4767 0.80 -1.0
5,506,554 + Pf6N2E2_4767 0.80 +0.5
5,506,554 + Pf6N2E2_4767 0.80 +1.9
5,506,554 + Pf6N2E2_4767 0.80 -0.8
5,506,554 + Pf6N2E2_4767 0.80 +0.4
5,506,554 + Pf6N2E2_4767 0.80 -0.5
5,506,555 - Pf6N2E2_4767 0.80 -0.4
5,506,555 - Pf6N2E2_4767 0.80 -0.5
5,506,555 - Pf6N2E2_4767 0.80 -0.5
5,506,555 - Pf6N2E2_4767 0.80 +0.2
5,506,555 - Pf6N2E2_4767 0.80 +0.5
5,506,555 - Pf6N2E2_4767 0.80 +0.4
5,506,555 - Pf6N2E2_4767 0.80 +0.8
5,506,555 - Pf6N2E2_4767 0.80 +0.9
5,506,728 + +0.0
5,506,729 - +0.1
5,506,751 + +2.4
5,506,751 + -0.5
5,506,752 - -0.8
5,506,874 + -0.3
5,506,874 + -0.2
5,506,875 - -0.6
5,506,918 + -0.8
5,506,981 + -0.1
5,507,120 + Pf6N2E2_4768 0.12 -0.4
5,507,120 + Pf6N2E2_4768 0.12 -0.0
5,507,120 + Pf6N2E2_4768 0.12 +1.2
5,507,120 + Pf6N2E2_4768 0.12 -0.3
5,507,120 + Pf6N2E2_4768 0.12 -0.4
5,507,121 - Pf6N2E2_4768 0.12 -1.4
5,507,121 - Pf6N2E2_4768 0.12 -1.0
5,507,121 - Pf6N2E2_4768 0.12 -0.2
5,507,161 + Pf6N2E2_4768 0.14 -0.0
5,507,161 + Pf6N2E2_4768 0.14 -0.1
5,507,161 + Pf6N2E2_4768 0.14 +1.1
5,507,161 + Pf6N2E2_4768 0.14 +1.1
5,507,161 + Pf6N2E2_4768 0.14 +0.4
5,507,161 + Pf6N2E2_4768 0.14 +0.9
5,507,162 - Pf6N2E2_4768 0.14 +1.0
5,507,162 - Pf6N2E2_4768 0.14 -1.8
5,507,162 - Pf6N2E2_4768 0.14 -0.8
5,507,162 - Pf6N2E2_4768 0.14 +0.9
5,507,162 - Pf6N2E2_4768 0.14 -0.6
5,507,162 - Pf6N2E2_4768 0.14 -0.3
5,507,162 - Pf6N2E2_4768 0.14 +0.3
5,507,162 - Pf6N2E2_4768 0.14 -1.1
5,507,162 - Pf6N2E2_4768 0.14 -1.2
5,507,223 + Pf6N2E2_4768 0.17 -0.3
5,507,223 + Pf6N2E2_4768 0.17 -0.2
5,507,223 + Pf6N2E2_4768 0.17 +1.3
5,507,224 - Pf6N2E2_4768 0.18 -1.5
5,507,224 - Pf6N2E2_4768 0.18 +1.1
5,507,284 + Pf6N2E2_4768 0.21 -0.4
5,507,284 + Pf6N2E2_4768 0.21 -0.4
5,507,285 - Pf6N2E2_4768 0.21 +0.5
5,507,285 - Pf6N2E2_4768 0.21 +0.6
5,507,285 - Pf6N2E2_4768 0.21 +0.9
5,507,285 - Pf6N2E2_4768 0.21 +0.9
5,507,353 + Pf6N2E2_4768 0.25 -0.2
5,507,353 + Pf6N2E2_4768 0.25 +0.7
5,507,353 + Pf6N2E2_4768 0.25 -1.0
5,507,353 + Pf6N2E2_4768 0.25 -0.6
5,507,354 - Pf6N2E2_4768 0.25 +1.4
5,507,354 - Pf6N2E2_4768 0.25 -0.2
5,507,354 - Pf6N2E2_4768 0.25 +0.2
5,507,854 + Pf6N2E2_4768 0.53 +0.3
5,507,998 + Pf6N2E2_4768 0.61 +1.3
5,507,998 + Pf6N2E2_4768 0.61 -0.9
5,507,998 + Pf6N2E2_4768 0.61 +2.4
5,508,223 + Pf6N2E2_4768 0.73 +0.5
5,508,223 + Pf6N2E2_4768 0.73 +0.1
5,508,223 + +1.4
5,508,223 + Pf6N2E2_4768 0.73 +0.5
5,508,223 + Pf6N2E2_4768 0.73 +0.9
5,508,223 + Pf6N2E2_4768 0.73 +0.9
5,508,223 + Pf6N2E2_4768 0.73 +0.2
5,508,223 + Pf6N2E2_4768 0.73 -0.5
5,508,223 + Pf6N2E2_4768 0.73 +0.8
5,508,224 - Pf6N2E2_4768 0.73 +0.7
5,508,224 - Pf6N2E2_4768 0.73 +0.2
5,508,224 - Pf6N2E2_4768 0.73 +1.8
5,508,224 - Pf6N2E2_4768 0.73 +2.2
5,508,224 - Pf6N2E2_4768 0.73 -0.2
5,508,224 - Pf6N2E2_4768 0.73 +1.0
5,508,224 - Pf6N2E2_4768 0.73 +0.8
5,508,224 - Pf6N2E2_4768 0.73 +0.6
5,508,257 + Pf6N2E2_4768 0.75 +0.6
5,508,257 + Pf6N2E2_4768 0.75 -0.8
5,508,257 + Pf6N2E2_4768 0.75 +0.6
5,508,258 - Pf6N2E2_4768 0.75 +0.2
5,508,258 - Pf6N2E2_4768 0.75 -0.7
5,508,321 + Pf6N2E2_4768 0.79 -2.4
5,508,321 + Pf6N2E2_4768 0.79 -0.3
5,508,321 + Pf6N2E2_4768 0.79 +0.1
5,508,322 - Pf6N2E2_4768 0.79 +0.6
5,508,322 - Pf6N2E2_4768 0.79 +0.3
5,508,322 - Pf6N2E2_4768 0.79 +0.9
5,508,364 + Pf6N2E2_4768 0.81 +0.8
5,508,364 + Pf6N2E2_4768 0.81 -0.4
5,508,364 + Pf6N2E2_4768 0.81 +1.0
5,508,364 + Pf6N2E2_4768 0.81 -0.8
5,508,365 - Pf6N2E2_4768 0.81 -0.7
5,508,472 + Pf6N2E2_4768 0.87 -0.1
5,508,472 + Pf6N2E2_4768 0.87 -0.4
5,508,472 + Pf6N2E2_4768 0.87 +0.7
5,508,481 + Pf6N2E2_4768 0.87 +0.9
5,508,481 + Pf6N2E2_4768 0.87 +0.1
5,508,490 + Pf6N2E2_4768 0.88 +1.2
5,508,490 + Pf6N2E2_4768 0.88 -0.0
5,508,491 - Pf6N2E2_4768 0.88 -0.2
5,508,491 - Pf6N2E2_4768 0.88 +1.0
5,508,491 - Pf6N2E2_4768 0.88 -1.0
5,508,505 + Pf6N2E2_4768 0.89 -1.0
5,508,505 + Pf6N2E2_4768 0.89 +0.7
5,508,506 - Pf6N2E2_4768 0.89 +2.1
5,508,506 - Pf6N2E2_4768 0.89 -0.2
5,508,506 - Pf6N2E2_4768 0.89 -1.3
5,508,604 + +0.1
5,508,604 + -0.5
5,508,604 + -0.1
5,508,605 - +0.3
5,508,628 - +0.2
5,508,628 - +0.4
5,508,821 - +0.1
5,508,902 + +0.3
5,508,903 - -0.7
5,508,903 - +0.1
5,508,903 - -0.6
5,508,932 + +0.6
5,508,932 + +0.3
5,508,932 + +0.3
5,508,961 + +0.1
5,508,962 - -1.4
5,509,201 + Pf6N2E2_4769 0.14 -0.7
5,509,201 + Pf6N2E2_4769 0.14 -0.3
5,509,201 + Pf6N2E2_4769 0.14 +1.0
5,509,202 - Pf6N2E2_4769 0.14 +0.2
5,509,202 - Pf6N2E2_4769 0.14 -0.1
5,509,210 + Pf6N2E2_4769 0.15 +0.4
5,509,210 + Pf6N2E2_4769 0.15 +0.6
5,509,210 + Pf6N2E2_4769 0.15 +0.2
5,509,210 + Pf6N2E2_4769 0.15 -0.8
5,509,210 + Pf6N2E2_4769 0.15 +0.7
5,509,252 + Pf6N2E2_4769 0.17 -0.4
5,509,402 + Pf6N2E2_4769 0.25 +0.1
5,509,403 - Pf6N2E2_4769 0.25 +0.3
5,509,417 + Pf6N2E2_4769 0.26 -1.1
5,509,418 - Pf6N2E2_4769 0.26 -0.0
5,509,418 - Pf6N2E2_4769 0.26 +0.2
5,509,418 - Pf6N2E2_4769 0.26 +1.0
5,509,418 - Pf6N2E2_4769 0.26 +0.1
5,509,418 - Pf6N2E2_4769 0.26 +0.3
5,509,418 - Pf6N2E2_4769 0.26 -1.0
5,509,418 - Pf6N2E2_4769 0.26 -0.1
5,509,418 - Pf6N2E2_4769 0.26 +3.0
5,509,418 - Pf6N2E2_4769 0.26 -1.3
5,509,519 + Pf6N2E2_4769 0.32 -1.6
5,509,519 + Pf6N2E2_4769 0.32 -0.8
5,509,519 + Pf6N2E2_4769 0.32 +0.1
5,509,519 + Pf6N2E2_4769 0.32 +0.7
5,509,519 + Pf6N2E2_4769 0.32 -0.5
5,509,519 + Pf6N2E2_4769 0.32 +1.4
5,509,520 - Pf6N2E2_4769 0.32 -1.2
5,509,520 - Pf6N2E2_4769 0.32 -0.4
5,509,520 - Pf6N2E2_4769 0.32 +0.3
5,509,520 - Pf6N2E2_4769 0.32 -1.3
5,509,520 - Pf6N2E2_4769 0.32 +0.1

Or see this region's nucleotide sequence