Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08775

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,644,261	+				+0.2
1,644,288	-				-0.0
1,644,408	+		MMP_RS08770	0.22	-0.1
1,644,417	+		MMP_RS08770	0.23	+0.0
1,644,441	-		MMP_RS08770	0.26	-0.4
1,644,563	-		MMP_RS08770	0.40	-0.3
1,644,571	+		MMP_RS08770	0.40	+0.4
1,644,683	-		MMP_RS08770	0.53	+0.5
1,644,684	+		MMP_RS08770	0.53	+0.8
1,644,710	-		MMP_RS08770	0.56	-0.2
1,644,769	+		MMP_RS08770	0.63	+0.5
1,644,861	+		MMP_RS08770	0.73	+0.5
1,644,867	-		MMP_RS08770	0.73	+0.1
1,644,870	+		MMP_RS08770	0.74	-0.1
1,645,014	-		MMP_RS08770	0.90	-0.0
1,645,088	-				+0.5
1,645,274	+		MMP_RS08775	0.38	+0.2
1,645,274	+		MMP_RS08775	0.38	+0.6
1,645,311	+		MMP_RS08775	0.46	+0.4
1,645,416	-		MMP_RS08775	0.69	+0.5
1,645,513	+				+0.1
1,645,556	-				-0.0
1,645,556	-				-0.3
1,645,559	+				+0.4
1,645,567	-				+0.2
1,645,740	-				-1.6
1,645,740	-				-2.8
1,645,804	+				-1.4
1,645,804	+				-1.6
1,645,838	-				-1.6
1,645,850	-				-2.6
1,645,851	+				-1.7
1,645,917	-				-1.8
1,645,919	-				-1.8
1,645,967	+				-2.4
1,645,980	+				-2.2
1,646,021	+				-1.3
1,646,072	-				-3.7
1,646,095	-				-1.7
1,646,175	-				-1.1
1,646,175	-				-1.9
1,646,231	-				-1.8
1,646,277	-		MMP_RS08785	0.26	+0.1
1,646,524	-		MMP_RS08790	0.15	+1.4
1,646,550	+		MMP_RS08790	0.19	-2.0