Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08315

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,562,586	+				-1.4
1,562,586	+				-2.1
1,562,832	+				-2.6
1,562,834	+				-0.7
1,562,895	-				-0.9
1,562,895	-				+0.5
1,562,896	+				+0.1
1,562,896	+				-0.0
1,562,907	-				-0.1
1,562,908	+				-0.0
1,562,908	+				-0.2
1,562,912	-				+0.2
1,562,913	+				-0.1
1,562,913	+				+0.3
1,562,922	+				-0.0
1,562,925	+				-0.4
1,562,951	+				+0.6
1,562,961	+				+0.2
1,562,987	+				+0.2
1,563,003	+				+0.0
1,563,037	+				-0.4
1,563,058	+		MMP_RS08310	0.14	+0.2
1,563,265	+				-0.2
1,563,300	-				+0.8
1,563,340	+				+0.7
1,563,425	+		MMP_RS08315	0.13	+0.3
1,563,457	+		MMP_RS08315	0.17	+1.6
1,563,745	-		MMP_RS08315	0.47	+0.4
1,563,746	+		MMP_RS08315	0.47	+0.2
1,564,169	-				+0.2
1,564,210	-				+0.2
1,564,210	-				+0.1
1,564,239	-				+0.8
1,564,239	-				+0.6
1,564,240	+				+0.0
1,564,274	-				+0.1
1,564,274	-				+0.2
1,564,275	+				-0.0
1,564,275	+				+0.4
1,564,275	+				+0.3
1,564,277	+				+0.4
1,564,278	-				+0.3
1,564,278	-				+0.2
1,564,279	+				+0.7
1,564,290	+				+0.3
1,564,299	+				+0.4
1,564,316	-				-0.2
1,564,482	+				-0.5
1,564,744	+		MMP_RS08320	0.28	-0.8
1,564,745	-		MMP_RS08320	0.28	-0.4
1,564,745	-		MMP_RS08320	0.28	-0.8
1,564,775	+		MMP_RS08320	0.31	-0.9
1,564,778	-		MMP_RS08320	0.31	-0.8
1,564,779	+		MMP_RS08320	0.31	-1.4
1,564,779	+		MMP_RS08320	0.31	-0.5
1,565,018	-		MMP_RS08320	0.51	-0.1
1,565,051	+		MMP_RS08320	0.54	-1.0