Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08275

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,556,269	+				-0.3
1,556,889	+				-1.0
1,557,172	-				+0.9
1,557,173	+				+1.1
1,557,179	+				+0.5
1,557,209	+				+0.4
1,557,212	-				+1.5
1,557,275	+				+0.4
1,557,300	+		MMP_RS08275	0.10	+0.3
1,557,300	+		MMP_RS08275	0.10	+0.6
1,557,300	+		MMP_RS08275	0.10	+0.4
1,557,525	-		MMP_RS08275	0.44	+0.6
1,557,526	+		MMP_RS08275	0.44	+0.5
1,557,526	+		MMP_RS08275	0.44	+0.5
1,557,530	-		MMP_RS08275	0.44	+0.5
1,557,551	-		MMP_RS08275	0.48	+0.4
1,557,552	+		MMP_RS08275	0.48	+0.4
1,557,552	+		MMP_RS08275	0.48	+0.2
1,557,556	+		MMP_RS08275	0.48	+0.3
1,557,556	+		MMP_RS08275	0.48	+1.0
1,557,613	+		MMP_RS08275	0.57	+0.9
1,557,613	+		MMP_RS08275	0.57	+0.2
1,557,614	-		MMP_RS08275	0.57	+0.6
1,557,615	+		MMP_RS08275	0.57	+0.4
1,557,636	-		MMP_RS08275	0.60	+0.4
1,557,808	-		MMP_RS08275	0.86	+0.7
1,557,935	+				-0.3
1,557,935	+				+0.4
1,557,935	+				+0.0
1,557,940	+				-0.2
1,558,398	-		MMP_RS08280	0.63	+0.2
1,558,528	+		MMP_RS08280	0.80	-0.2
1,558,671	-				-0.3
1,558,749	+				+1.0
1,558,796	-		MMP_RS08285	0.14	+0.3
1,558,796	-		MMP_RS08285	0.14	+0.1
1,558,797	+		MMP_RS08285	0.14	+0.2
1,558,799	+		MMP_RS08285	0.15	+0.5
1,558,799	+		MMP_RS08285	0.15	+0.2
1,558,800	-		MMP_RS08285	0.15	-0.3
1,558,801	+		MMP_RS08285	0.15	+0.4
1,558,801	+		MMP_RS08285	0.15	+0.7
1,558,801	+		MMP_RS08285	0.15	+0.6
1,558,880	+		MMP_RS08285	0.27	-0.6