Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07805

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,477,771	+				+0.5
1,477,786	-				+0.3
1,477,786	-				-0.0
1,477,819	-				-0.1
1,477,823	+				-0.1
1,478,178	+		MMP_RS07800	0.41	+0.3
1,478,237	-		MMP_RS07800	0.48	+0.8
1,478,237	-		MMP_RS07800	0.48	+0.7
1,478,339	-		MMP_RS07800	0.58	+0.8
1,478,339	-		MMP_RS07800	0.58	+0.0
1,478,340	+		MMP_RS07800	0.59	-0.2
1,478,363	-		MMP_RS07800	0.61	-0.3
1,478,364	+		MMP_RS07800	0.61	-0.3
1,478,364	+		MMP_RS07800	0.61	+0.1
1,478,366	+		MMP_RS07800	0.61	+0.1
1,478,366	+		MMP_RS07800	0.61	+0.7
1,478,543	+		MMP_RS07800	0.80	+0.2
1,478,594	-		MMP_RS07800	0.86	+0.0
1,478,704	-				+0.2
1,478,722	-				+0.3
1,478,722	-				+0.1
1,478,722	-				+0.2
1,478,732	-				-0.2
1,478,734	-				+0.1
1,478,745	+				+0.2
1,478,754	+				-0.0
1,478,754	-				+0.2
1,478,755	+				+1.2
1,478,757	+				-0.0
1,478,762	+				+0.4
1,478,791	+				+0.1
1,478,791	+				+0.2
1,478,809	+				-0.1
1,478,888	-		MMP_RS07805	0.19	+0.2
1,478,889	+		MMP_RS07805	0.19	+0.3
1,479,086	-		MMP_RS07805	0.45	+0.1
1,479,110	+		MMP_RS07805	0.48	+0.7
1,479,207	-		MMP_RS07805	0.60	-0.1
1,479,208	+		MMP_RS07805	0.61	+0.2
1,479,208	+		MMP_RS07805	0.61	+0.2
1,479,212	+		MMP_RS07805	0.61	+0.2
1,479,246	-		MMP_RS07805	0.65	-0.3
1,479,297	+		MMP_RS07805	0.72	+0.2
1,479,358	-		MMP_RS07805	0.80	+0.2
1,479,443	+				-1.2
1,479,534	+				+0.2
1,479,601	-				+0.1
1,479,605	+				+0.0
1,479,621	-				-1.0
1,479,640	-				-1.6
1,479,640	-				-1.9
1,479,641	+				-0.1
1,479,641	+				+0.7
1,479,641	+				+0.3
1,479,651	-				-1.0
1,479,652	+				+0.7
1,479,652	+				+0.3
1,479,714	-				-1.9
1,479,715	+				-1.6
1,480,003	+				-1.1
1,480,182	-				-1.0
1,480,276	+				-0.3
1,480,316	+				-0.2
1,480,336	+				+0.7
1,480,353	-				+0.0
1,480,355	-				+0.3
1,480,358	+				+0.1
1,480,358	+				+0.1