Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07410

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,410,788	+				-1.1
1,410,793	+				-1.6
1,411,131	-				-0.2
1,411,131	-				-1.2
1,411,131	-				-0.5
1,411,646	+				-1.1
1,411,646	+				-1.6
1,411,698	+				+0.2
1,411,698	+				+0.7
1,411,702	-				+0.0
1,411,716	-				+0.2
1,411,743	+				-0.4
1,411,748	-				+0.1
1,411,749	+				+0.1
1,411,846	+		MMP_RS07410	0.15	+0.3
1,412,140	+		MMP_RS07410	0.47	+0.8
1,412,167	+		MMP_RS07410	0.49	+0.3
1,412,205	-		MMP_RS07410	0.54	+0.5
1,412,205	-		MMP_RS07410	0.54	-0.3
1,412,206	+		MMP_RS07410	0.54	+1.1
1,412,216	-		MMP_RS07410	0.55	+0.2
1,412,216	-		MMP_RS07410	0.55	+0.2
1,412,216	-		MMP_RS07410	0.55	-0.1
1,412,217	+		MMP_RS07410	0.55	+0.2
1,412,218	-		MMP_RS07410	0.55	+0.1
1,412,219	+		MMP_RS07410	0.55	+0.3
1,412,224	-		MMP_RS07410	0.56	+0.3
1,412,224	-		MMP_RS07410	0.56	+0.5
1,412,225	+		MMP_RS07410	0.56	+0.2
1,412,231	-		MMP_RS07410	0.56	+0.6
1,412,231	-		MMP_RS07410	0.56	+0.8
1,412,320	-		MMP_RS07410	0.66	+0.2
1,412,329	+		MMP_RS07410	0.67	-0.0
1,412,331	+		MMP_RS07410	0.67	+0.5
1,412,352	-		MMP_RS07410	0.69	+0.6
1,412,354	-		MMP_RS07410	0.69	-0.7
1,412,355	+		MMP_RS07410	0.69	-0.2
1,412,445	+		MMP_RS07410	0.79	+0.1
1,412,522	-		MMP_RS07410	0.87	-0.2
1,412,619	+				+0.4
1,412,654	-				+0.2
1,412,654	-				+0.7
1,412,657	+				+0.2
1,412,672	+				+1.2
1,412,675	-				-0.3
1,412,679	+				+0.3
1,412,682	-				+0.2
1,412,691	-				-0.3
1,412,696	-				+0.0
1,412,696	-				+0.3
1,412,705	-				-0.2
1,412,705	-				+0.5
1,412,741	+				+0.0
1,412,741	+				+0.5
1,412,745	+				+0.3
1,412,745	+				+0.5
1,412,750	+				-0.0
1,412,763	-				+0.6
1,412,763	-				-0.0
1,412,763	-				+0.4
1,413,055	-		MMP_RS07415	0.44	+0.4
1,413,067	+		MMP_RS07415	0.46	+0.8
1,413,073	+		MMP_RS07415	0.47	+0.2
1,413,195	+		MMP_RS07415	0.64	+0.6
1,413,297	-		MMP_RS07415	0.79	+0.6
1,413,365	+		MMP_RS07415	0.89	+0.5
1,413,365	+		MMP_RS07415	0.89	+0.4
1,413,366	-		MMP_RS07415	0.89	-0.2
1,413,378	-				+0.5
1,413,379	+				+0.4
1,413,379	+				+0.5
1,413,445	+				+0.6
1,413,475	-				+0.4
1,413,526	+				-0.5
1,413,527	-				-0.2
1,413,557	-				-0.8
1,413,571	-				-0.2
1,413,615	-		MMP_RS07420	0.23	-0.8
1,413,616	+		MMP_RS07420	0.23	-0.6
1,413,639	+		MMP_RS07420	0.31	-0.3