Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07130

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,363,399	+		MMP_RS07120	0.75	+0.1
1,363,535	-		MMP_RS07120	0.86	+0.3
1,363,617	-				+0.8
1,363,638	-				+0.3
1,363,638	-				+0.7
1,363,824	+				+0.6
1,363,899	-		MMP_RS07125	0.16	+0.7
1,363,971	-		MMP_RS07125	0.29	+0.7
1,364,098	-		MMP_RS07125	0.54	+0.5
1,364,176	+		MMP_RS07125	0.68	+0.6
1,364,308	+				+0.8
1,364,381	-				+1.1
1,364,508	+		MMP_RS07130	0.22	+0.9
1,364,513	-		MMP_RS07130	0.23	+0.2
1,364,594	-		MMP_RS07130	0.35	+1.0
1,364,598	+		MMP_RS07130	0.35	+0.3
1,364,631	-		MMP_RS07130	0.40	+0.0
1,364,753	-		MMP_RS07130	0.58	+0.8
1,364,754	+		MMP_RS07130	0.58	+0.2
1,364,798	-		MMP_RS07130	0.64	+0.8
1,364,798	-		MMP_RS07130	0.64	+0.2
1,364,807	+		MMP_RS07130	0.66	+0.6
1,364,928	+		MMP_RS07130	0.83	+0.6
1,364,928	+		MMP_RS07130	0.83	+0.2
1,364,932	+		MMP_RS07130	0.84	+0.1
1,365,035	-				+0.0
1,365,040	-				+0.5
1,365,040	-				+0.5
1,365,040	-				+0.2
1,365,098	-				+0.6
1,365,188	-		MMP_RS07135	0.13	+0.7
1,365,262	+		MMP_RS07135	0.22	+0.4
1,365,304	+		MMP_RS07135	0.27	+0.8
1,365,459	+		MMP_RS07135	0.45	+0.4
1,365,463	+		MMP_RS07135	0.46	+0.4
1,365,470	-		MMP_RS07135	0.46	+0.5
1,365,494	+		MMP_RS07135	0.49	+0.1
1,365,494	+		MMP_RS07135	0.49	+0.7
1,365,494	+		MMP_RS07135	0.49	-0.0
1,365,502	+		MMP_RS07135	0.50	+0.3
1,365,587	+		MMP_RS07135	0.60	+0.1
1,365,659	-		MMP_RS07135	0.69	+1.5
1,365,659	-		MMP_RS07135	0.69	+0.2
1,365,664	+		MMP_RS07135	0.69	+0.5
1,365,671	+		MMP_RS07135	0.70	+0.9
1,365,885	+				+0.4
1,365,922	-				+0.4
1,365,976	+				+0.5
1,365,976	+				+0.3
1,365,979	+				+0.4
1,365,982	-				+0.0
1,365,983	+				-0.1
1,365,993	-				+0.2
1,366,031	+				+0.1