Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06665

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,277,485	+		MMP_RS06660	0.42	+0.2
1,277,551	+		MMP_RS06660	0.48	+0.4
1,277,629	-		MMP_RS06660	0.55	-0.1
1,277,630	+		MMP_RS06660	0.55	-0.1
1,277,697	-		MMP_RS06660	0.60	+0.1
1,277,723	+		MMP_RS06660	0.63	-0.2
1,277,818	-		MMP_RS06660	0.71	+0.2
1,277,819	+		MMP_RS06660	0.71	+0.6
1,277,883	-		MMP_RS06660	0.76	+0.2
1,277,886	-		MMP_RS06660	0.77	-0.1
1,277,966	-		MMP_RS06660	0.83	-0.2
1,278,010	+		MMP_RS06660	0.87	+0.8
1,278,102	-				+0.1
1,278,195	-				+0.3
1,278,196	+				+0.2
1,278,197	-				+0.5
1,278,198	+				-0.3
1,278,205	+				+0.2
1,278,205	+				+0.4
1,278,213	-				+0.1
1,278,213	-				+0.7
1,278,215	-				+0.7
1,278,215	-				-0.2
1,278,216	+				+0.2
1,278,224	-				-0.3
1,278,224	-				+0.0
1,278,230	+				-0.0
1,278,231	-				+0.4
1,278,375	-				-0.0
1,278,375	-				+0.1
1,278,375	-				+1.2
1,278,376	+				+0.2
1,278,378	+				+0.0
1,278,382	+				-0.0
1,278,382	+				-0.3
1,278,384	-				+0.0
1,278,390	+				+0.2
1,278,390	+				-0.3
1,278,448	+		MMP_RS06665	0.12	-0.1
1,278,453	+		MMP_RS06665	0.12	+0.5
1,278,484	+		MMP_RS06665	0.14	+0.2
1,278,526	+		MMP_RS06665	0.17	-0.0
1,278,707	+		MMP_RS06665	0.28	-0.4
1,278,749	+		MMP_RS06665	0.31	+0.4
1,278,785	-		MMP_RS06665	0.33	+0.5
1,278,786	+		MMP_RS06665	0.33	+0.2
1,278,805	-		MMP_RS06665	0.34	+0.3
1,278,987	+		MMP_RS06665	0.46	+0.3
1,279,004	+		MMP_RS06665	0.47	+0.5
1,279,024	+		MMP_RS06665	0.48	-0.1
1,279,135	+		MMP_RS06665	0.55	-0.2
1,279,273	+		MMP_RS06665	0.64	-0.0
1,279,382	-		MMP_RS06665	0.71	+0.1
1,279,552	+		MMP_RS06665	0.82	+0.4
1,279,552	+		MMP_RS06665	0.82	+0.4
1,279,582	-		MMP_RS06665	0.84	+0.4
1,279,880	+				-0.2
1,279,891	+				+0.2
1,279,932	+				-0.0
1,280,044	-		MMP_RS06670	0.14	-1.4
1,280,048	-		MMP_RS06670	0.14	+1.5
1,280,053	+		MMP_RS06670	0.14	+1.3
1,280,149	-		MMP_RS06670	0.21	-1.2
1,280,191	+		MMP_RS06670	0.25	-0.4
1,280,195	-		MMP_RS06670	0.25	-0.7
1,280,541	+		MMP_RS06670	0.51	+0.3
1,280,612	-		MMP_RS06670	0.57	+1.7
1,280,612	-		MMP_RS06670	0.57	+0.5
1,280,784	-		MMP_RS06670	0.70	+0.1
1,280,828	+		MMP_RS06670	0.73	+1.3