Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06540

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,255,766	-		MMP_RS06535	0.32	+0.3
1,255,766	-		MMP_RS06535	0.32	+0.3
1,255,912	-		MMP_RS06535	0.42	+1.0
1,256,538	+		MMP_RS06535	0.85	+0.6
1,256,538	+		MMP_RS06535	0.85	+0.5
1,256,584	+		MMP_RS06535	0.88	+0.4
1,257,081	+		MMP_RS06540	0.31	+0.3
1,257,087	-		MMP_RS06540	0.32	+0.7
1,257,685	+		MMP_RS06540	0.88	+0.5
1,257,705	+				-0.1
1,257,738	-				+0.5
1,257,756	-				+1.3
1,257,756	-				+0.4
1,257,757	+				+0.9
1,257,810	+				+0.4
1,257,812	+				-0.1
1,257,812	+				+1.0
1,257,853	+		MMP_RS06545	0.14	-0.1
1,257,877	-		MMP_RS06545	0.24	+1.0
1,257,922	+		MMP_RS06545	0.43	+0.1
1,257,929	-		MMP_RS06545	0.46	+0.5
1,257,963	-		MMP_RS06545	0.60	+0.4
1,258,027	+		MMP_RS06545	0.87	+0.1
1,258,109	+				+0.3
1,258,130	-				+0.3
1,258,139	-				+0.7
1,258,143	-				+0.0
1,258,320	+		MMP_RS06550	0.11	+0.6
1,258,406	+		MMP_RS06550	0.16	+0.8
1,258,670	-		MMP_RS06550	0.32	+0.1
1,258,676	-		MMP_RS06550	0.32	+0.5
1,258,733	+		MMP_RS06550	0.35	+0.5
1,258,733	+		MMP_RS06550	0.35	-0.3