Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06085

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,163,318	-		MMP_RS06080	0.54	+0.7
1,163,616	+		MMP_RS06080	0.71	+0.2
1,163,781	-		MMP_RS06080	0.80	-0.3
1,163,803	+		MMP_RS06080	0.82	-0.0
1,163,826	-		MMP_RS06080	0.83	-0.1
1,163,827	+		MMP_RS06080	0.83	-0.7
1,163,861	+		MMP_RS06080	0.85	+0.3
1,163,918	-		MMP_RS06080	0.88	+0.5
1,163,918	-		MMP_RS06080	0.88	-0.2
1,163,919	+		MMP_RS06080	0.88	+0.8
1,163,919	+		MMP_RS06080	0.88	+0.4
1,163,927	-		MMP_RS06080	0.89	+0.1
1,164,110	-				-0.1
1,164,110	-				+0.7
1,164,120	-				+0.4
1,164,121	+				+0.2
1,164,125	+				+0.5
1,164,176	-				-0.1
1,164,260	+				+0.5
1,164,295	-				+0.2
1,164,296	+				+0.2
1,164,306	+				-0.0
1,164,522	-		MMP_RS06085	0.18	+0.4
1,164,545	+		MMP_RS06085	0.20	-0.0
1,164,591	+		MMP_RS06085	0.24	+0.2
1,164,636	-		MMP_RS06085	0.28	+0.4
1,164,654	+		MMP_RS06085	0.30	-0.3
1,164,654	+		MMP_RS06085	0.30	-0.1
1,164,697	-		MMP_RS06085	0.33	+0.3
1,164,720	+		MMP_RS06085	0.35	+0.0
1,164,720	+		MMP_RS06085	0.35	+0.3
1,164,758	-		MMP_RS06085	0.39	+0.2
1,164,794	+		MMP_RS06085	0.42	+0.2
1,164,845	-		MMP_RS06085	0.46	+1.0
1,164,851	+		MMP_RS06085	0.47	+0.0
1,164,893	+		MMP_RS06085	0.51	-0.2
1,164,926	+		MMP_RS06085	0.53	+0.2
1,165,020	+		MMP_RS06085	0.62	+0.0
1,165,097	+		MMP_RS06085	0.69	+0.9
1,165,098	-		MMP_RS06085	0.69	-0.4
1,165,120	-		MMP_RS06085	0.71	+0.5
1,165,139	+		MMP_RS06085	0.72	+0.1
1,165,146	+		MMP_RS06085	0.73	+0.1
1,165,162	+		MMP_RS06085	0.74	+0.0
1,165,164	+		MMP_RS06085	0.74	+0.1
1,165,175	+		MMP_RS06085	0.75	+0.1
1,165,185	-		MMP_RS06085	0.76	+0.2
1,165,203	-		MMP_RS06085	0.78	-0.3
1,165,246	-		MMP_RS06085	0.82	+1.6
1,165,249	-		MMP_RS06085	0.82	+0.5
1,165,249	-		MMP_RS06085	0.82	-0.1
1,165,249	-		MMP_RS06085	0.82	+0.1
1,165,250	+		MMP_RS06085	0.82	+0.8
1,165,251	-		MMP_RS06085	0.82	-0.0
1,165,251	-		MMP_RS06085	0.82	+0.1
1,165,251	-		MMP_RS06085	0.82	+0.1
1,165,251	-		MMP_RS06085	0.82	+0.3
1,165,252	+		MMP_RS06085	0.82	+0.2
1,165,252	+		MMP_RS06085	0.82	+0.2
1,165,253	-		MMP_RS06085	0.82	+0.4
1,165,253	-		MMP_RS06085	0.82	-0.2
1,165,253	-		MMP_RS06085	0.82	+0.0
1,165,254	+		MMP_RS06085	0.82	+0.0
1,165,266	-		MMP_RS06085	0.83	+0.1
1,165,266	-		MMP_RS06085	0.83	+0.2
1,165,267	+		MMP_RS06085	0.83	+0.5
1,165,302	-		MMP_RS06085	0.87	+0.1
1,165,303	+		MMP_RS06085	0.87	+0.3
1,165,303	+		MMP_RS06085	0.87	+0.1
1,165,305	-		MMP_RS06085	0.87	-0.3
1,165,306	+		MMP_RS06085	0.87	+0.1
1,165,321	-		MMP_RS06085	0.88	+0.2
1,165,372	-				-0.1
1,165,373	+				-0.2
1,165,434	+				-0.1
1,165,442	+				-0.5
1,165,453	+				+0.3
1,165,453	+				+0.5
1,165,460	-				-0.0
1,165,461	+				+0.2
1,165,493	+				-0.1
1,165,506	-				+0.4
1,165,507	+				+0.1
1,165,507	+				+0.6
1,165,507	+				-0.5
1,165,518	+				+0.1
1,165,530	+				-0.2
1,165,581	+				+0.5
1,165,643	+				+0.3
1,165,645	-				-0.1
1,165,745	-		MMP_RS06090	0.17	+0.4
1,165,787	+		MMP_RS06090	0.21	+0.2
1,165,787	+		MMP_RS06090	0.21	-0.1
1,165,947	+		MMP_RS06090	0.37	-0.0
1,166,044	-		MMP_RS06090	0.46	+0.3
1,166,045	+		MMP_RS06090	0.46	+0.6
1,166,093	-		MMP_RS06090	0.51	-0.1
1,166,415	+		MMP_RS06090	0.81	+0.4
1,166,420	+		MMP_RS06090	0.82	-0.0