Strain Fitness in Methanococcus maripaludis S2 around MMP_RS01575

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
292,597	-				-1.1
292,620	-				-0.4
293,157	-		MMP_RS01570	0.85	+0.1
293,187	-				+0.0
293,198	+				+0.0
293,217	-				+0.7
293,219	-				+0.3
293,220	+				-0.4
293,413	+		MMP_RS01575	0.23	+0.1
293,420	-		MMP_RS01575	0.24	+0.3
293,438	-		MMP_RS01575	0.26	+0.2
293,487	-		MMP_RS01575	0.31	-0.0
293,682	-		MMP_RS01575	0.52	-0.1
293,682	-		MMP_RS01575	0.52	+0.5
293,838	+		MMP_RS01575	0.69	+0.4
294,029	-		MMP_RS01575	0.90	+0.3
294,137	-				+0.5
294,145	+				-0.7
294,152	-				+0.1
294,153	+				-0.2
294,164	-				-0.8
294,164	-				+0.8
294,172	-				+0.1
294,195	+				+0.4
294,224	+				-0.1
294,224	+				+0.1
294,225	-				-0.1
294,226	+				+0.1
294,226	+				+0.2
294,226	+				+0.5
294,226	+				-0.0
294,227	-				-0.0
294,228	+				+0.3
294,241	+				-0.3
294,241	+				+0.2
294,241	+				+0.2
294,244	-				+0.3
294,244	-				-0.2
294,245	+				-0.1
294,245	+				+0.2
294,245	+				+0.3
294,245	+				+0.2
294,245	+				+0.1
294,338	+				+0.1
294,338	+				-0.0
294,377	+		MMP_RS01580	0.11	+0.4
294,377	+		MMP_RS01580	0.11	+1.3
294,398	+		MMP_RS01580	0.14	-0.0
294,398	+		MMP_RS01580	0.14	-0.0
294,459	-		MMP_RS01580	0.21	+0.1
294,470	+		MMP_RS01580	0.22	-0.2
294,515	+		MMP_RS01580	0.28	+0.5
294,637	+		MMP_RS01580	0.42	+0.0
294,752	-		MMP_RS01580	0.55	+0.1
294,753	+		MMP_RS01580	0.56	-0.2
294,870	-		MMP_RS01580	0.69	-0.2
294,966	+		MMP_RS01580	0.81	-0.0
295,055	+				+0.3