Experiment: Fusidic 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2292 and Ga0059261_2293 are separated by 192 nucleotides Ga0059261_2293 and Ga0059261_2294 overlap by 4 nucleotides Ga0059261_2294 and Ga0059261_2295 overlap by 1 nucleotides Ga0059261_2295 and Ga0059261_2296 overlap by 8 nucleotides
Ga0059261_2292: Ga0059261_2292 - zinc-ribbon domain/Protein of unknown function (DUF3426), at 2,395,981 to 2,396,679
_2292
Ga0059261_2293: Ga0059261_2293 - cell division ATP-binding protein FtsE, at 2,396,872 to 2,397,579
_2293
Ga0059261_2294: Ga0059261_2294 - Cell division protein, at 2,397,576 to 2,398,466
_2294
Ga0059261_2295: Ga0059261_2295 - DUF218 domain, at 2,398,466 to 2,399,014
_2295
Ga0059261_2296: Ga0059261_2296 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 2,399,007 to 2,399,693
_2296
Position (kb)
2397
2398
2399 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3 at 2396.843 kb on + strand at 2396.843 kb on + strand at 2396.844 kb on - strand at 2396.844 kb on - strand at 2396.844 kb on - strand at 2396.846 kb on + strand at 2396.846 kb on + strand at 2396.846 kb on + strand at 2396.846 kb on + strand at 2396.846 kb on + strand at 2396.847 kb on - strand at 2396.847 kb on - strand at 2396.847 kb on - strand at 2396.847 kb on - strand at 2396.847 kb on - strand at 2396.847 kb on - strand at 2396.847 kb on - strand at 2396.880 kb on + strand at 2396.880 kb on + strand at 2396.880 kb on + strand at 2396.880 kb on + strand at 2396.880 kb on + strand at 2396.881 kb on - strand at 2396.971 kb on + strand, within Ga0059261_2293 at 2396.971 kb on + strand, within Ga0059261_2293 at 2396.971 kb on + strand, within Ga0059261_2293 at 2396.971 kb on + strand, within Ga0059261_2293 at 2396.971 kb on + strand, within Ga0059261_2293 at 2396.972 kb on - strand, within Ga0059261_2293 at 2396.972 kb on - strand, within Ga0059261_2293 at 2396.972 kb on - strand, within Ga0059261_2293 at 2397.025 kb on + strand, within Ga0059261_2293 at 2397.025 kb on + strand, within Ga0059261_2293 at 2397.025 kb on + strand, within Ga0059261_2293 at 2397.025 kb on + strand, within Ga0059261_2293 at 2397.025 kb on + strand, within Ga0059261_2293 at 2397.025 kb on + strand, within Ga0059261_2293 at 2397.025 kb on + strand, within Ga0059261_2293 at 2397.026 kb on - strand, within Ga0059261_2293 at 2397.026 kb on - strand, within Ga0059261_2293 at 2397.026 kb on - strand at 2397.026 kb on - strand, within Ga0059261_2293 at 2397.120 kb on + strand, within Ga0059261_2293 at 2397.169 kb on + strand, within Ga0059261_2293 at 2397.170 kb on - strand, within Ga0059261_2293 at 2397.219 kb on + strand, within Ga0059261_2293 at 2397.553 kb on + strand at 2397.633 kb on - strand at 2398.250 kb on + strand, within Ga0059261_2294 at 2398.251 kb on - strand, within Ga0059261_2294 at 2398.274 kb on + strand, within Ga0059261_2294 at 2398.684 kb on - strand, within Ga0059261_2295 at 2398.684 kb on - strand, within Ga0059261_2295 at 2398.768 kb on + strand, within Ga0059261_2295 at 2398.817 kb on + strand, within Ga0059261_2295 at 2398.817 kb on + strand, within Ga0059261_2295 at 2398.967 kb on + strand at 2398.967 kb on + strand at 2398.967 kb on + strand at 2398.967 kb on + strand at 2398.967 kb on + strand at 2398.967 kb on + strand at 2398.968 kb on - strand at 2399.049 kb on + strand at 2399.121 kb on + strand at 2399.122 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.0005 mg/ml remove 2,396,843 + +0.6 2,396,843 + +0.7 2,396,844 - -2.2 2,396,844 - +0.3 2,396,844 - -0.1 2,396,846 + -0.4 2,396,846 + -0.1 2,396,846 + -0.2 2,396,846 + +0.0 2,396,846 + -0.3 2,396,847 - -0.8 2,396,847 - -0.6 2,396,847 - -0.9 2,396,847 - -0.3 2,396,847 - -0.6 2,396,847 - -0.3 2,396,847 - -1.6 2,396,880 + -0.1 2,396,880 + -0.4 2,396,880 + +0.9 2,396,880 + +0.9 2,396,880 + -0.1 2,396,881 - -2.3 2,396,971 + Ga0059261_2293 0.14 -0.1 2,396,971 + Ga0059261_2293 0.14 -0.6 2,396,971 + Ga0059261_2293 0.14 -1.9 2,396,971 + Ga0059261_2293 0.14 -0.1 2,396,971 + Ga0059261_2293 0.14 +2.9 2,396,972 - Ga0059261_2293 0.14 -0.4 2,396,972 - Ga0059261_2293 0.14 +0.1 2,396,972 - Ga0059261_2293 0.14 +0.9 2,397,025 + Ga0059261_2293 0.22 -0.9 2,397,025 + Ga0059261_2293 0.22 -1.0 2,397,025 + Ga0059261_2293 0.22 -1.2 2,397,025 + Ga0059261_2293 0.22 -0.7 2,397,025 + Ga0059261_2293 0.22 -0.7 2,397,025 + Ga0059261_2293 0.22 +0.4 2,397,025 + Ga0059261_2293 0.22 -0.2 2,397,026 - Ga0059261_2293 0.22 -1.7 2,397,026 - Ga0059261_2293 0.22 -0.4 2,397,026 - +0.9 2,397,026 - Ga0059261_2293 0.22 -0.5 2,397,120 + Ga0059261_2293 0.35 +0.7 2,397,169 + Ga0059261_2293 0.42 -1.9 2,397,170 - Ga0059261_2293 0.42 -0.4 2,397,219 + Ga0059261_2293 0.49 -0.4 2,397,553 + +0.7 2,397,633 - -1.3 2,398,250 + Ga0059261_2294 0.76 -1.5 2,398,251 - Ga0059261_2294 0.76 -0.4 2,398,274 + Ga0059261_2294 0.78 -1.1 2,398,684 - Ga0059261_2295 0.40 -1.5 2,398,684 - Ga0059261_2295 0.40 -3.0 2,398,768 + Ga0059261_2295 0.55 -1.8 2,398,817 + Ga0059261_2295 0.64 -3.4 2,398,817 + Ga0059261_2295 0.64 -2.8 2,398,967 + -1.7 2,398,967 + -1.4 2,398,967 + -1.6 2,398,967 + +0.9 2,398,967 + -5.7 2,398,967 + -4.0 2,398,968 - -1.9 2,399,049 + -0.1 2,399,121 + -1.4 2,399,122 - -0.7
Or see this region's nucleotide sequence