Experiment: Fusidic 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0793 and Ga0059261_0794 are separated by 74 nucleotides Ga0059261_0794 and Ga0059261_0795 are separated by 129 nucleotides Ga0059261_0795 and Ga0059261_0796 overlap by 4 nucleotides
Ga0059261_0793: Ga0059261_0793 - Dipeptidyl aminopeptidases/acylaminoacyl-peptidases, at 834,440 to 836,410
_0793
Ga0059261_0794: Ga0059261_0794 - hypothetical protein, at 836,485 to 837,270
_0794
Ga0059261_0795: Ga0059261_0795 - Glutathione S-transferase, at 837,400 to 838,071
_0795
Ga0059261_0796: Ga0059261_0796 - Uncharacterized conserved protein, contains double-stranded beta-helix domain, at 838,068 to 838,514
_0796
Position (kb) 836
837
838 Strain fitness (log2 ratio) -2
-1
0
1
2 at 835.503 kb on + strand, within Ga0059261_0793 at 835.560 kb on + strand, within Ga0059261_0793 at 835.560 kb on + strand, within Ga0059261_0793 at 835.560 kb on + strand, within Ga0059261_0793 at 835.561 kb on - strand, within Ga0059261_0793 at 835.572 kb on + strand, within Ga0059261_0793 at 835.572 kb on + strand, within Ga0059261_0793 at 835.572 kb on + strand, within Ga0059261_0793 at 835.572 kb on + strand, within Ga0059261_0793 at 835.572 kb on + strand, within Ga0059261_0793 at 835.573 kb on - strand, within Ga0059261_0793 at 835.573 kb on - strand, within Ga0059261_0793 at 835.573 kb on - strand, within Ga0059261_0793 at 835.704 kb on + strand, within Ga0059261_0793 at 835.704 kb on + strand, within Ga0059261_0793 at 835.776 kb on + strand, within Ga0059261_0793 at 835.777 kb on - strand, within Ga0059261_0793 at 835.788 kb on - strand, within Ga0059261_0793 at 835.788 kb on - strand, within Ga0059261_0793 at 835.813 kb on + strand, within Ga0059261_0793 at 835.813 kb on + strand, within Ga0059261_0793 at 835.813 kb on + strand, within Ga0059261_0793 at 835.813 kb on + strand, within Ga0059261_0793 at 835.814 kb on - strand, within Ga0059261_0793 at 835.814 kb on - strand, within Ga0059261_0793 at 835.814 kb on - strand, within Ga0059261_0793 at 835.814 kb on - strand, within Ga0059261_0793 at 835.814 kb on - strand, within Ga0059261_0793 at 835.878 kb on + strand, within Ga0059261_0793 at 835.878 kb on + strand, within Ga0059261_0793 at 835.879 kb on - strand, within Ga0059261_0793 at 835.879 kb on - strand, within Ga0059261_0793 at 835.879 kb on - strand, within Ga0059261_0793 at 835.879 kb on - strand, within Ga0059261_0793 at 835.893 kb on + strand, within Ga0059261_0793 at 835.894 kb on - strand, within Ga0059261_0793 at 836.021 kb on + strand, within Ga0059261_0793 at 836.021 kb on + strand, within Ga0059261_0793 at 836.021 kb on + strand, within Ga0059261_0793 at 836.021 kb on + strand, within Ga0059261_0793 at 836.021 kb on + strand, within Ga0059261_0793 at 836.021 kb on + strand, within Ga0059261_0793 at 836.021 kb on + strand, within Ga0059261_0793 at 836.021 kb on + strand, within Ga0059261_0793 at 836.021 kb on + strand, within Ga0059261_0793 at 836.021 kb on + strand, within Ga0059261_0793 at 836.021 kb on + strand, within Ga0059261_0793 at 836.021 kb on + strand, within Ga0059261_0793 at 836.022 kb on - strand, within Ga0059261_0793 at 836.022 kb on - strand, within Ga0059261_0793 at 836.022 kb on - strand, within Ga0059261_0793 at 836.022 kb on - strand, within Ga0059261_0793 at 836.022 kb on - strand, within Ga0059261_0793 at 836.022 kb on - strand, within Ga0059261_0793 at 836.022 kb on - strand, within Ga0059261_0793 at 836.022 kb on - strand, within Ga0059261_0793 at 836.022 kb on - strand, within Ga0059261_0793 at 836.025 kb on + strand, within Ga0059261_0793 at 836.025 kb on + strand, within Ga0059261_0793 at 836.025 kb on + strand, within Ga0059261_0793 at 836.025 kb on + strand, within Ga0059261_0793 at 836.025 kb on + strand, within Ga0059261_0793 at 836.025 kb on + strand, within Ga0059261_0793 at 836.025 kb on + strand, within Ga0059261_0793 at 836.025 kb on + strand, within Ga0059261_0793 at 836.025 kb on + strand, within Ga0059261_0793 at 836.026 kb on - strand, within Ga0059261_0793 at 836.026 kb on - strand, within Ga0059261_0793 at 836.026 kb on - strand, within Ga0059261_0793 at 836.026 kb on - strand, within Ga0059261_0793 at 836.026 kb on - strand, within Ga0059261_0793 at 836.026 kb on - strand, within Ga0059261_0793 at 836.032 kb on + strand, within Ga0059261_0793 at 836.172 kb on + strand, within Ga0059261_0793 at 836.172 kb on + strand, within Ga0059261_0793 at 836.172 kb on + strand, within Ga0059261_0793 at 836.173 kb on - strand, within Ga0059261_0793 at 836.173 kb on - strand, within Ga0059261_0793 at 836.267 kb on + strand at 836.268 kb on - strand at 836.268 kb on - strand at 836.268 kb on - strand at 836.378 kb on + strand at 836.379 kb on - strand at 836.379 kb on - strand at 836.379 kb on - strand at 836.401 kb on + strand at 836.401 kb on + strand at 836.401 kb on + strand at 836.401 kb on + strand at 836.401 kb on + strand at 836.402 kb on - strand at 836.402 kb on - strand at 836.443 kb on + strand at 836.443 kb on + strand at 836.443 kb on + strand at 836.443 kb on + strand at 836.443 kb on + strand at 836.443 kb on + strand at 836.444 kb on - strand at 836.444 kb on - strand at 836.444 kb on - strand at 836.444 kb on - strand at 836.444 kb on - strand at 836.603 kb on + strand, within Ga0059261_0794 at 836.604 kb on - strand, within Ga0059261_0794 at 836.604 kb on - strand, within Ga0059261_0794 at 836.604 kb on - strand, within Ga0059261_0794 at 836.604 kb on - strand, within Ga0059261_0794 at 836.684 kb on + strand, within Ga0059261_0794 at 836.685 kb on - strand, within Ga0059261_0794 at 836.736 kb on - strand, within Ga0059261_0794 at 836.769 kb on - strand, within Ga0059261_0794 at 836.789 kb on + strand, within Ga0059261_0794 at 836.789 kb on + strand, within Ga0059261_0794 at 836.789 kb on + strand, within Ga0059261_0794 at 836.789 kb on + strand, within Ga0059261_0794 at 836.790 kb on - strand, within Ga0059261_0794 at 836.790 kb on - strand, within Ga0059261_0794 at 836.790 kb on - strand, within Ga0059261_0794 at 836.790 kb on - strand, within Ga0059261_0794 at 836.944 kb on - strand, within Ga0059261_0794 at 836.944 kb on - strand, within Ga0059261_0794 at 837.069 kb on + strand, within Ga0059261_0794 at 837.070 kb on - strand, within Ga0059261_0794 at 837.113 kb on + strand, within Ga0059261_0794 at 837.114 kb on - strand, within Ga0059261_0794 at 837.259 kb on + strand at 837.259 kb on + strand at 837.259 kb on + strand at 837.259 kb on + strand at 837.259 kb on + strand at 837.259 kb on + strand at 837.260 kb on - strand at 837.260 kb on - strand at 837.260 kb on - strand at 837.260 kb on - strand at 837.260 kb on - strand at 837.264 kb on + strand at 837.265 kb on - strand at 837.265 kb on - strand at 837.265 kb on - strand at 837.265 kb on - strand at 837.286 kb on + strand at 837.430 kb on + strand at 837.430 kb on + strand at 837.430 kb on + strand at 837.430 kb on + strand at 837.430 kb on + strand at 837.430 kb on + strand at 837.430 kb on + strand at 837.430 kb on + strand at 837.431 kb on - strand at 837.431 kb on - strand at 837.431 kb on - strand at 837.431 kb on - strand at 837.508 kb on + strand, within Ga0059261_0795 at 837.625 kb on + strand, within Ga0059261_0795 at 837.625 kb on + strand, within Ga0059261_0795 at 837.625 kb on + strand, within Ga0059261_0795 at 837.626 kb on - strand, within Ga0059261_0795 at 837.626 kb on - strand, within Ga0059261_0795 at 837.766 kb on + strand, within Ga0059261_0795 at 837.766 kb on + strand, within Ga0059261_0795 at 837.767 kb on - strand, within Ga0059261_0795 at 837.767 kb on - strand, within Ga0059261_0795 at 837.767 kb on - strand, within Ga0059261_0795 at 837.767 kb on - strand, within Ga0059261_0795 at 837.767 kb on - strand, within Ga0059261_0795 at 837.767 kb on - strand, within Ga0059261_0795 at 837.767 kb on - strand, within Ga0059261_0795 at 837.767 kb on - strand, within Ga0059261_0795 at 837.932 kb on - strand, within Ga0059261_0795 at 837.932 kb on - strand, within Ga0059261_0795 at 837.964 kb on + strand, within Ga0059261_0795 at 837.964 kb on + strand, within Ga0059261_0795 at 837.964 kb on + strand, within Ga0059261_0795 at 837.965 kb on - strand, within Ga0059261_0795 at 837.965 kb on - strand, within Ga0059261_0795 at 837.966 kb on + strand, within Ga0059261_0795 at 837.966 kb on + strand, within Ga0059261_0795 at 837.967 kb on - strand, within Ga0059261_0795 at 837.967 kb on - strand, within Ga0059261_0795 at 837.967 kb on - strand, within Ga0059261_0795 at 837.967 kb on - strand, within Ga0059261_0795 at 837.991 kb on + strand, within Ga0059261_0795 at 837.991 kb on + strand, within Ga0059261_0795 at 837.991 kb on + strand, within Ga0059261_0795 at 837.991 kb on + strand, within Ga0059261_0795 at 837.991 kb on + strand, within Ga0059261_0795 at 837.991 kb on + strand, within Ga0059261_0795 at 837.991 kb on + strand, within Ga0059261_0795 at 837.991 kb on + strand, within Ga0059261_0795 at 837.991 kb on + strand, within Ga0059261_0795 at 837.991 kb on + strand, within Ga0059261_0795 at 837.991 kb on + strand, within Ga0059261_0795 at 837.992 kb on - strand, within Ga0059261_0795 at 837.992 kb on - strand, within Ga0059261_0795 at 837.992 kb on - strand, within Ga0059261_0795 at 837.992 kb on - strand, within Ga0059261_0795 at 837.992 kb on - strand, within Ga0059261_0795 at 837.992 kb on - strand, within Ga0059261_0795 at 837.992 kb on - strand, within Ga0059261_0795 at 837.992 kb on - strand, within Ga0059261_0795 at 837.992 kb on - strand, within Ga0059261_0795 at 837.992 kb on - strand, within Ga0059261_0795 at 837.992 kb on - strand, within Ga0059261_0795 at 837.992 kb on - strand, within Ga0059261_0795 at 837.992 kb on - strand, within Ga0059261_0795 at 837.992 kb on - strand, within Ga0059261_0795 at 837.992 kb on - strand, within Ga0059261_0795 at 838.069 kb on + strand at 838.070 kb on - strand at 838.070 kb on - strand at 838.070 kb on - strand at 838.070 kb on - strand at 838.136 kb on - strand, within Ga0059261_0796 at 838.174 kb on + strand, within Ga0059261_0796
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.0005 mg/ml remove 835,503 + Ga0059261_0793 0.54 -0.8 835,560 + Ga0059261_0793 0.57 +0.4 835,560 + Ga0059261_0793 0.57 +0.4 835,560 + Ga0059261_0793 0.57 -0.0 835,561 - Ga0059261_0793 0.57 -0.2 835,572 + Ga0059261_0793 0.57 +0.2 835,572 + Ga0059261_0793 0.57 -1.3 835,572 + Ga0059261_0793 0.57 -1.4 835,572 + Ga0059261_0793 0.57 -0.6 835,572 + Ga0059261_0793 0.57 -0.5 835,573 - Ga0059261_0793 0.57 -0.4 835,573 - Ga0059261_0793 0.57 -0.4 835,573 - Ga0059261_0793 0.57 -0.5 835,704 + Ga0059261_0793 0.64 -0.1 835,704 + Ga0059261_0793 0.64 +1.5 835,776 + Ga0059261_0793 0.68 -0.2 835,777 - Ga0059261_0793 0.68 -0.3 835,788 - Ga0059261_0793 0.68 +0.7 835,788 - Ga0059261_0793 0.68 +0.9 835,813 + Ga0059261_0793 0.70 -0.4 835,813 + Ga0059261_0793 0.70 -0.1 835,813 + Ga0059261_0793 0.70 -0.0 835,813 + Ga0059261_0793 0.70 +0.6 835,814 - Ga0059261_0793 0.70 +0.0 835,814 - Ga0059261_0793 0.70 -0.1 835,814 - Ga0059261_0793 0.70 -1.4 835,814 - Ga0059261_0793 0.70 -0.5 835,814 - Ga0059261_0793 0.70 +0.9 835,878 + Ga0059261_0793 0.73 -0.3 835,878 + Ga0059261_0793 0.73 +0.5 835,879 - Ga0059261_0793 0.73 +0.3 835,879 - Ga0059261_0793 0.73 -0.5 835,879 - Ga0059261_0793 0.73 +0.5 835,879 - Ga0059261_0793 0.73 -0.4 835,893 + Ga0059261_0793 0.74 +0.4 835,894 - Ga0059261_0793 0.74 -0.0 836,021 + Ga0059261_0793 0.80 +0.3 836,021 + Ga0059261_0793 0.80 +0.4 836,021 + Ga0059261_0793 0.80 +0.1 836,021 + Ga0059261_0793 0.80 -0.0 836,021 + Ga0059261_0793 0.80 -0.3 836,021 + Ga0059261_0793 0.80 +0.2 836,021 + Ga0059261_0793 0.80 -1.8 836,021 + Ga0059261_0793 0.80 -0.7 836,021 + Ga0059261_0793 0.80 -0.1 836,021 + Ga0059261_0793 0.80 -0.6 836,021 + Ga0059261_0793 0.80 +1.4 836,021 + Ga0059261_0793 0.80 -0.4 836,022 - Ga0059261_0793 0.80 +0.3 836,022 - Ga0059261_0793 0.80 -1.6 836,022 - Ga0059261_0793 0.80 -0.4 836,022 - Ga0059261_0793 0.80 -1.6 836,022 - Ga0059261_0793 0.80 +0.3 836,022 - Ga0059261_0793 0.80 +0.3 836,022 - Ga0059261_0793 0.80 -0.4 836,022 - Ga0059261_0793 0.80 +0.0 836,022 - Ga0059261_0793 0.80 +0.0 836,025 + Ga0059261_0793 0.80 -0.4 836,025 + Ga0059261_0793 0.80 -0.6 836,025 + Ga0059261_0793 0.80 -1.5 836,025 + Ga0059261_0793 0.80 -0.9 836,025 + Ga0059261_0793 0.80 +0.2 836,025 + Ga0059261_0793 0.80 -0.4 836,025 + Ga0059261_0793 0.80 +0.5 836,025 + Ga0059261_0793 0.80 -0.0 836,025 + Ga0059261_0793 0.80 +0.2 836,026 - Ga0059261_0793 0.80 +1.1 836,026 - Ga0059261_0793 0.80 +0.1 836,026 - Ga0059261_0793 0.80 +0.7 836,026 - Ga0059261_0793 0.80 -0.7 836,026 - Ga0059261_0793 0.80 +0.1 836,026 - Ga0059261_0793 0.80 -0.1 836,032 + Ga0059261_0793 0.81 +0.0 836,172 + Ga0059261_0793 0.88 +0.1 836,172 + Ga0059261_0793 0.88 -1.0 836,172 + Ga0059261_0793 0.88 +0.2 836,173 - Ga0059261_0793 0.88 -0.3 836,173 - Ga0059261_0793 0.88 +0.5 836,267 + +1.1 836,268 - -0.3 836,268 - -0.4 836,268 - -0.6 836,378 + +0.4 836,379 - -0.5 836,379 - +0.4 836,379 - +0.5 836,401 + -0.1 836,401 + +0.3 836,401 + -0.2 836,401 + -0.2 836,401 + -0.6 836,402 - -0.5 836,402 - +0.5 836,443 + -0.5 836,443 + +1.6 836,443 + +1.1 836,443 + +0.5 836,443 + -0.4 836,443 + +0.4 836,444 - +0.2 836,444 - -0.4 836,444 - +0.2 836,444 - -0.9 836,444 - -0.1 836,603 + Ga0059261_0794 0.15 -0.1 836,604 - Ga0059261_0794 0.15 -0.1 836,604 - Ga0059261_0794 0.15 +0.1 836,604 - Ga0059261_0794 0.15 -0.5 836,604 - Ga0059261_0794 0.15 +0.7 836,684 + Ga0059261_0794 0.25 -0.1 836,685 - Ga0059261_0794 0.25 +1.0 836,736 - Ga0059261_0794 0.32 +0.3 836,769 - Ga0059261_0794 0.36 +0.7 836,789 + Ga0059261_0794 0.39 -0.3 836,789 + Ga0059261_0794 0.39 +0.9 836,789 + Ga0059261_0794 0.39 +0.7 836,789 + Ga0059261_0794 0.39 +0.4 836,790 - Ga0059261_0794 0.39 -0.1 836,790 - Ga0059261_0794 0.39 -0.0 836,790 - Ga0059261_0794 0.39 +0.3 836,790 - Ga0059261_0794 0.39 +1.6 836,944 - Ga0059261_0794 0.58 +0.1 836,944 - Ga0059261_0794 0.58 -0.1 837,069 + Ga0059261_0794 0.74 +0.1 837,070 - Ga0059261_0794 0.74 +0.1 837,113 + Ga0059261_0794 0.80 -0.1 837,114 - Ga0059261_0794 0.80 +0.5 837,259 + +0.1 837,259 + -0.3 837,259 + +1.3 837,259 + -0.1 837,259 + -0.3 837,259 + +0.9 837,260 - +0.6 837,260 - -0.1 837,260 - -0.1 837,260 - -0.4 837,260 - -0.8 837,264 + +0.0 837,265 - +1.3 837,265 - -0.5 837,265 - +0.0 837,265 - -0.0 837,286 + -0.3 837,430 + -0.5 837,430 + +0.4 837,430 + +0.8 837,430 + +0.9 837,430 + +1.0 837,430 + -0.3 837,430 + -0.3 837,430 + +0.4 837,431 - -0.3 837,431 - +0.7 837,431 - +1.5 837,431 - -0.9 837,508 + Ga0059261_0795 0.16 +0.6 837,625 + Ga0059261_0795 0.33 +0.1 837,625 + Ga0059261_0795 0.33 +0.5 837,625 + Ga0059261_0795 0.33 -0.9 837,626 - Ga0059261_0795 0.34 +0.2 837,626 - Ga0059261_0795 0.34 +0.4 837,766 + Ga0059261_0795 0.54 +0.4 837,766 + Ga0059261_0795 0.54 -0.1 837,767 - Ga0059261_0795 0.55 +0.0 837,767 - Ga0059261_0795 0.55 -1.6 837,767 - Ga0059261_0795 0.55 +0.1 837,767 - Ga0059261_0795 0.55 +0.8 837,767 - Ga0059261_0795 0.55 +1.5 837,767 - Ga0059261_0795 0.55 +0.2 837,767 - Ga0059261_0795 0.55 +0.1 837,767 - Ga0059261_0795 0.55 +0.0 837,932 - Ga0059261_0795 0.79 -0.1 837,932 - Ga0059261_0795 0.79 -0.4 837,964 + Ga0059261_0795 0.84 +0.0 837,964 + Ga0059261_0795 0.84 +0.1 837,964 + Ga0059261_0795 0.84 -0.1 837,965 - Ga0059261_0795 0.84 +0.7 837,965 - Ga0059261_0795 0.84 +0.2 837,966 + Ga0059261_0795 0.84 -0.3 837,966 + Ga0059261_0795 0.84 +0.4 837,967 - Ga0059261_0795 0.84 +0.1 837,967 - Ga0059261_0795 0.84 -0.1 837,967 - Ga0059261_0795 0.84 +0.5 837,967 - Ga0059261_0795 0.84 -0.7 837,991 + Ga0059261_0795 0.88 +0.2 837,991 + Ga0059261_0795 0.88 -0.1 837,991 + Ga0059261_0795 0.88 -0.5 837,991 + Ga0059261_0795 0.88 -0.3 837,991 + Ga0059261_0795 0.88 -0.2 837,991 + Ga0059261_0795 0.88 +0.3 837,991 + Ga0059261_0795 0.88 +0.2 837,991 + Ga0059261_0795 0.88 -0.9 837,991 + Ga0059261_0795 0.88 +0.4 837,991 + Ga0059261_0795 0.88 -0.5 837,991 + Ga0059261_0795 0.88 -0.8 837,992 - Ga0059261_0795 0.88 +0.1 837,992 - Ga0059261_0795 0.88 -0.3 837,992 - Ga0059261_0795 0.88 +2.3 837,992 - Ga0059261_0795 0.88 +0.1 837,992 - Ga0059261_0795 0.88 -0.5 837,992 - Ga0059261_0795 0.88 -0.2 837,992 - Ga0059261_0795 0.88 +0.4 837,992 - Ga0059261_0795 0.88 -0.1 837,992 - Ga0059261_0795 0.88 -0.1 837,992 - Ga0059261_0795 0.88 +0.3 837,992 - Ga0059261_0795 0.88 -0.0 837,992 - Ga0059261_0795 0.88 +1.1 837,992 - Ga0059261_0795 0.88 +0.9 837,992 - Ga0059261_0795 0.88 +0.4 837,992 - Ga0059261_0795 0.88 -0.9 838,069 + -0.5 838,070 - -0.6 838,070 - +1.0 838,070 - +0.0 838,070 - -0.9 838,136 - Ga0059261_0796 0.15 -0.1 838,174 + Ga0059261_0796 0.24 -1.0
Or see this region's nucleotide sequence