Experiment: Fusidic 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0438 and Ga0059261_0439 are separated by 113 nucleotides Ga0059261_0439 and Ga0059261_0440 are separated by 97 nucleotides Ga0059261_0440 and Ga0059261_0441 are separated by 408 nucleotides
Ga0059261_0438: Ga0059261_0438 - hypothetical protein, at 426,972 to 427,151
_0438
Ga0059261_0439: Ga0059261_0439 - hypothetical protein, at 427,265 to 427,480
_0439
Ga0059261_0440: Ga0059261_0440 - Uncharacterized conserved protein, at 427,578 to 428,036
_0440
Ga0059261_0441: Ga0059261_0441 - DNA-binding HTH domain-containing proteins, at 428,445 to 429,188
_0441
Position (kb) 427
428 Strain fitness (log2 ratio) -2
-1
0
1 at 426.284 kb on + strand at 426.285 kb on - strand at 426.328 kb on + strand at 426.338 kb on + strand at 426.339 kb on - strand at 426.339 kb on - strand at 426.376 kb on + strand at 426.376 kb on + strand at 426.376 kb on + strand at 426.376 kb on + strand at 426.376 kb on + strand at 426.377 kb on - strand at 426.377 kb on - strand at 426.377 kb on - strand at 426.377 kb on - strand at 426.400 kb on - strand at 426.428 kb on + strand at 426.428 kb on + strand at 426.429 kb on - strand at 426.429 kb on - strand at 426.431 kb on + strand at 426.431 kb on + strand at 426.431 kb on + strand at 426.431 kb on + strand at 426.431 kb on + strand at 426.431 kb on + strand at 426.431 kb on + strand at 426.432 kb on - strand at 426.432 kb on - strand at 426.432 kb on - strand at 426.432 kb on - strand at 426.432 kb on - strand at 426.659 kb on - strand at 426.716 kb on + strand at 426.716 kb on + strand at 426.716 kb on + strand at 426.717 kb on - strand at 426.717 kb on - strand at 426.717 kb on - strand at 426.724 kb on + strand at 426.724 kb on + strand at 426.775 kb on + strand at 426.776 kb on - strand at 426.776 kb on - strand at 426.776 kb on - strand at 426.780 kb on + strand at 426.780 kb on + strand at 426.781 kb on - strand at 426.888 kb on - strand at 426.973 kb on + strand at 426.973 kb on + strand at 426.974 kb on - strand at 426.974 kb on - strand at 426.974 kb on - strand at 426.974 kb on - strand at 426.974 kb on - strand at 426.974 kb on - strand at 426.975 kb on + strand at 426.975 kb on + strand at 426.975 kb on + strand at 426.975 kb on + strand at 426.976 kb on - strand at 426.976 kb on - strand at 426.976 kb on - strand at 426.976 kb on - strand at 427.007 kb on + strand, within Ga0059261_0438 at 427.007 kb on + strand, within Ga0059261_0438 at 427.007 kb on + strand, within Ga0059261_0438 at 427.007 kb on + strand, within Ga0059261_0438 at 427.008 kb on - strand, within Ga0059261_0438 at 427.141 kb on + strand at 427.141 kb on + strand at 427.142 kb on - strand at 427.142 kb on - strand at 427.151 kb on + strand at 427.151 kb on + strand at 427.151 kb on + strand at 427.152 kb on - strand at 427.152 kb on - strand at 427.152 kb on - strand at 427.152 kb on - strand at 427.152 kb on - strand at 427.152 kb on - strand at 427.152 kb on - strand at 427.152 kb on - strand at 427.154 kb on + strand at 427.154 kb on + strand at 427.154 kb on + strand at 427.154 kb on + strand at 427.154 kb on + strand at 427.154 kb on + strand at 427.154 kb on + strand at 427.155 kb on - strand at 427.155 kb on - strand at 427.155 kb on - strand at 427.155 kb on - strand at 427.155 kb on - strand at 427.155 kb on - strand at 427.155 kb on - strand at 427.175 kb on + strand at 427.175 kb on + strand at 427.175 kb on + strand at 427.175 kb on + strand at 427.175 kb on + strand at 427.175 kb on + strand at 427.176 kb on - strand at 427.176 kb on - strand at 427.176 kb on - strand at 427.176 kb on - strand at 427.176 kb on - strand at 427.176 kb on - strand at 427.180 kb on + strand at 427.245 kb on - strand at 427.434 kb on + strand, within Ga0059261_0439 at 427.434 kb on + strand, within Ga0059261_0439 at 427.435 kb on - strand, within Ga0059261_0439 at 427.435 kb on - strand, within Ga0059261_0439 at 427.435 kb on - strand, within Ga0059261_0439 at 427.506 kb on + strand at 427.507 kb on - strand at 427.564 kb on - strand at 427.796 kb on + strand, within Ga0059261_0440 at 427.797 kb on - strand, within Ga0059261_0440 at 427.797 kb on - strand, within Ga0059261_0440 at 427.797 kb on - strand, within Ga0059261_0440 at 427.801 kb on + strand, within Ga0059261_0440 at 427.801 kb on + strand, within Ga0059261_0440 at 427.801 kb on + strand, within Ga0059261_0440 at 427.801 kb on + strand, within Ga0059261_0440 at 427.801 kb on + strand, within Ga0059261_0440 at 427.801 kb on + strand, within Ga0059261_0440 at 427.802 kb on - strand, within Ga0059261_0440 at 427.860 kb on - strand, within Ga0059261_0440 at 427.860 kb on - strand, within Ga0059261_0440 at 427.878 kb on + strand, within Ga0059261_0440 at 427.878 kb on + strand, within Ga0059261_0440 at 427.879 kb on - strand, within Ga0059261_0440 at 427.879 kb on - strand, within Ga0059261_0440 at 427.909 kb on + strand, within Ga0059261_0440 at 427.910 kb on - strand, within Ga0059261_0440 at 427.910 kb on - strand, within Ga0059261_0440 at 427.910 kb on - strand, within Ga0059261_0440 at 427.931 kb on + strand, within Ga0059261_0440 at 427.931 kb on + strand, within Ga0059261_0440 at 427.932 kb on - strand, within Ga0059261_0440 at 427.932 kb on - strand, within Ga0059261_0440 at 427.932 kb on - strand, within Ga0059261_0440 at 427.932 kb on - strand, within Ga0059261_0440 at 427.932 kb on - strand, within Ga0059261_0440 at 428.034 kb on + strand at 428.034 kb on + strand at 428.034 kb on + strand at 428.034 kb on + strand at 428.035 kb on - strand at 428.066 kb on - strand at 428.130 kb on + strand at 428.283 kb on - strand at 428.306 kb on + strand at 428.307 kb on - strand at 428.315 kb on - strand at 428.345 kb on - strand at 428.345 kb on - strand at 428.428 kb on + strand at 428.428 kb on + strand at 428.429 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.0005 mg/ml remove 426,284 + -1.1 426,285 - -0.6 426,328 + -0.7 426,338 + -0.9 426,339 - -0.3 426,339 - -0.1 426,376 + +0.4 426,376 + +0.3 426,376 + -0.4 426,376 + +0.0 426,376 + +0.2 426,377 - -0.1 426,377 - -0.6 426,377 - -0.3 426,377 - -1.0 426,400 - -0.6 426,428 + +0.5 426,428 + -0.9 426,429 - +0.2 426,429 - -0.2 426,431 + -0.7 426,431 + +0.7 426,431 + -0.0 426,431 + +0.5 426,431 + -0.0 426,431 + -0.3 426,431 + -1.0 426,432 - +0.2 426,432 - -0.2 426,432 - -1.7 426,432 - -1.8 426,432 - -0.2 426,659 - -0.1 426,716 + +0.9 426,716 + -0.8 426,716 + -1.3 426,717 - +0.3 426,717 - -1.0 426,717 - -0.3 426,724 + +0.2 426,724 + +0.5 426,775 + -0.9 426,776 - -0.2 426,776 - +1.1 426,776 - +0.1 426,780 + -0.6 426,780 + +0.2 426,781 - +0.2 426,888 - +0.1 426,973 + +0.8 426,973 + +0.6 426,974 - -0.5 426,974 - -0.6 426,974 - +1.3 426,974 - -0.2 426,974 - -0.4 426,974 - +1.1 426,975 + +0.4 426,975 + +0.7 426,975 + +1.3 426,975 + -0.3 426,976 - -0.4 426,976 - +0.1 426,976 - -0.3 426,976 - +0.1 427,007 + Ga0059261_0438 0.19 +0.3 427,007 + Ga0059261_0438 0.19 -0.1 427,007 + Ga0059261_0438 0.19 +0.3 427,007 + Ga0059261_0438 0.19 +0.1 427,008 - Ga0059261_0438 0.20 -0.7 427,141 + -0.5 427,141 + -0.3 427,142 - -1.1 427,142 - -0.2 427,151 + -0.3 427,151 + -0.1 427,151 + -0.0 427,152 - -0.6 427,152 - -0.4 427,152 - -1.7 427,152 - +0.2 427,152 - -0.0 427,152 - +0.0 427,152 - -0.3 427,152 - -1.0 427,154 + -0.5 427,154 + +0.1 427,154 + -0.5 427,154 + +0.1 427,154 + +0.1 427,154 + +0.1 427,154 + -0.1 427,155 - +0.0 427,155 - +0.3 427,155 - +0.3 427,155 - +0.7 427,155 - +0.2 427,155 - -0.6 427,155 - -0.2 427,175 + -2.1 427,175 + +1.3 427,175 + +0.6 427,175 + -0.2 427,175 + -0.2 427,175 + +0.2 427,176 - +1.0 427,176 - +1.0 427,176 - -0.1 427,176 - +0.1 427,176 - -0.3 427,176 - -0.2 427,180 + -0.6 427,245 - +0.1 427,434 + Ga0059261_0439 0.78 +0.7 427,434 + Ga0059261_0439 0.78 +0.8 427,435 - Ga0059261_0439 0.79 +0.1 427,435 - Ga0059261_0439 0.79 -0.3 427,435 - Ga0059261_0439 0.79 +0.0 427,506 + -0.1 427,507 - -0.1 427,564 - -0.5 427,796 + Ga0059261_0440 0.47 +0.2 427,797 - Ga0059261_0440 0.48 -0.9 427,797 - Ga0059261_0440 0.48 -0.4 427,797 - Ga0059261_0440 0.48 +1.3 427,801 + Ga0059261_0440 0.49 -0.1 427,801 + Ga0059261_0440 0.49 -1.3 427,801 + Ga0059261_0440 0.49 -0.5 427,801 + Ga0059261_0440 0.49 +0.7 427,801 + Ga0059261_0440 0.49 +0.4 427,801 + Ga0059261_0440 0.49 -0.8 427,802 - Ga0059261_0440 0.49 +0.0 427,860 - Ga0059261_0440 0.61 +0.1 427,860 - Ga0059261_0440 0.61 +0.2 427,878 + Ga0059261_0440 0.65 +0.4 427,878 + Ga0059261_0440 0.65 +0.1 427,879 - Ga0059261_0440 0.66 -0.1 427,879 - Ga0059261_0440 0.66 +0.6 427,909 + Ga0059261_0440 0.72 -0.4 427,910 - Ga0059261_0440 0.72 -0.5 427,910 - Ga0059261_0440 0.72 +0.2 427,910 - Ga0059261_0440 0.72 +0.4 427,931 + Ga0059261_0440 0.77 -0.0 427,931 + Ga0059261_0440 0.77 +0.9 427,932 - Ga0059261_0440 0.77 -0.1 427,932 - Ga0059261_0440 0.77 +1.0 427,932 - Ga0059261_0440 0.77 -0.0 427,932 - Ga0059261_0440 0.77 -1.1 427,932 - Ga0059261_0440 0.77 -0.7 428,034 + -0.5 428,034 + +0.3 428,034 + -0.6 428,034 + -0.2 428,035 - -0.2 428,066 - -1.1 428,130 + +0.1 428,283 - -0.4 428,306 + -0.2 428,307 - -0.4 428,315 - -0.7 428,345 - +0.5 428,345 - -0.3 428,428 + +0.0 428,428 + +0.1 428,429 - -0.1
Or see this region's nucleotide sequence