Experiment: Fusidic 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0119 and Ga0059261_0120 are separated by 106 nucleotides
Ga0059261_0119: Ga0059261_0119 - tRNA, at 113,930 to 114,019
_0119
Ga0059261_0120: Ga0059261_0120 - lytic murein transglycosylase, at 114,126 to 115,178
_0120
Position (kb)
113
114
115 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 112.937 kb on - strand at 112.964 kb on + strand at 112.964 kb on + strand at 112.964 kb on + strand at 112.964 kb on + strand at 112.965 kb on - strand at 112.965 kb on - strand at 112.977 kb on + strand at 112.978 kb on - strand at 112.978 kb on - strand at 112.992 kb on + strand at 112.993 kb on - strand at 112.994 kb on + strand at 112.994 kb on + strand at 112.995 kb on - strand at 112.995 kb on - strand at 112.995 kb on - strand at 112.995 kb on - strand at 112.995 kb on - strand at 112.995 kb on - strand at 112.995 kb on - strand at 112.995 kb on - strand at 112.995 kb on - strand at 113.028 kb on + strand at 113.028 kb on + strand at 113.029 kb on - strand at 113.112 kb on + strand at 113.112 kb on + strand at 113.112 kb on + strand at 113.112 kb on + strand at 113.113 kb on - strand at 113.113 kb on - strand at 113.113 kb on - strand at 113.113 kb on - strand at 113.116 kb on + strand at 113.116 kb on + strand at 113.116 kb on + strand at 113.116 kb on + strand at 113.116 kb on + strand at 113.116 kb on + strand at 113.116 kb on + strand at 113.116 kb on + strand at 113.116 kb on + strand at 113.116 kb on + strand at 113.116 kb on + strand at 113.116 kb on + strand at 113.116 kb on + strand at 113.116 kb on + strand at 113.116 kb on + strand at 113.116 kb on + strand at 113.117 kb on - strand at 113.117 kb on - strand at 113.117 kb on - strand at 113.117 kb on - strand at 113.117 kb on - strand at 113.117 kb on - strand at 113.117 kb on - strand at 113.117 kb on - strand at 113.117 kb on - strand at 113.117 kb on - strand at 113.117 kb on - strand at 113.117 kb on - strand at 113.117 kb on - strand at 113.117 kb on - strand at 113.117 kb on - strand at 113.117 kb on - strand at 113.117 kb on - strand at 113.117 kb on - strand at 113.118 kb on + strand at 113.118 kb on + strand at 113.119 kb on - strand at 113.122 kb on + strand at 113.123 kb on - strand at 113.123 kb on - strand at 113.123 kb on - strand at 113.162 kb on + strand at 113.163 kb on - strand at 113.163 kb on - strand at 113.163 kb on - strand at 113.163 kb on - strand at 113.163 kb on - strand at 113.268 kb on + strand at 113.268 kb on + strand at 113.268 kb on + strand at 113.268 kb on + strand at 113.268 kb on + strand at 113.268 kb on + strand at 113.268 kb on + strand at 113.269 kb on - strand at 113.269 kb on - strand at 113.269 kb on - strand at 113.269 kb on - strand at 113.269 kb on - strand at 113.269 kb on - strand at 113.269 kb on - strand at 113.269 kb on - strand at 113.269 kb on - strand at 113.284 kb on + strand at 113.284 kb on + strand at 113.284 kb on + strand at 113.284 kb on + strand at 113.284 kb on + strand at 113.285 kb on - strand at 113.285 kb on - strand at 113.285 kb on - strand at 113.285 kb on - strand at 113.358 kb on - strand at 113.358 kb on - strand at 113.383 kb on + strand at 113.383 kb on + strand at 113.383 kb on + strand at 113.383 kb on + strand at 113.384 kb on - strand at 113.384 kb on - strand at 113.384 kb on - strand at 113.397 kb on + strand at 113.397 kb on + strand at 113.398 kb on - strand at 113.418 kb on + strand at 113.418 kb on + strand at 113.418 kb on + strand at 113.418 kb on + strand at 113.418 kb on + strand at 113.418 kb on + strand at 113.419 kb on - strand at 113.419 kb on - strand at 113.419 kb on - strand at 113.442 kb on - strand at 113.538 kb on - strand at 113.538 kb on - strand at 113.538 kb on - strand at 113.553 kb on + strand at 113.553 kb on + strand at 113.554 kb on - strand at 113.554 kb on - strand at 113.554 kb on - strand at 113.554 kb on - strand at 113.575 kb on - strand at 113.611 kb on + strand at 113.644 kb on + strand at 113.644 kb on + strand at 113.644 kb on + strand at 113.645 kb on - strand at 113.645 kb on - strand at 113.645 kb on - strand at 113.648 kb on + strand at 113.649 kb on - strand at 113.649 kb on - strand at 113.664 kb on - strand at 113.706 kb on + strand at 113.706 kb on + strand at 113.706 kb on + strand at 113.707 kb on - strand at 113.736 kb on + strand at 113.736 kb on + strand at 113.737 kb on - strand at 113.741 kb on - strand at 113.741 kb on - strand at 113.744 kb on - strand at 113.744 kb on - strand at 113.769 kb on + strand at 113.769 kb on + strand at 113.769 kb on + strand at 113.770 kb on - strand at 113.833 kb on + strand at 114.148 kb on + strand at 114.149 kb on - strand at 114.149 kb on - strand at 114.149 kb on - strand at 114.149 kb on - strand at 114.155 kb on + strand at 114.155 kb on + strand at 114.155 kb on + strand at 114.155 kb on + strand at 114.156 kb on - strand at 114.188 kb on + strand at 114.188 kb on + strand at 114.189 kb on - strand at 114.189 kb on - strand at 114.189 kb on - strand at 114.189 kb on - strand at 114.240 kb on + strand, within Ga0059261_0120 at 114.240 kb on + strand, within Ga0059261_0120 at 114.240 kb on + strand, within Ga0059261_0120 at 114.240 kb on + strand, within Ga0059261_0120 at 114.240 kb on + strand, within Ga0059261_0120 at 114.240 kb on + strand, within Ga0059261_0120 at 114.240 kb on + strand, within Ga0059261_0120 at 114.240 kb on + strand, within Ga0059261_0120 at 114.240 kb on + strand, within Ga0059261_0120 at 114.240 kb on + strand, within Ga0059261_0120 at 114.240 kb on + strand, within Ga0059261_0120 at 114.240 kb on + strand, within Ga0059261_0120 at 114.240 kb on + strand, within Ga0059261_0120 at 114.241 kb on - strand, within Ga0059261_0120 at 114.241 kb on - strand, within Ga0059261_0120 at 114.241 kb on - strand, within Ga0059261_0120 at 114.241 kb on - strand, within Ga0059261_0120 at 114.241 kb on - strand, within Ga0059261_0120 at 114.241 kb on - strand, within Ga0059261_0120 at 114.241 kb on - strand, within Ga0059261_0120 at 114.241 kb on - strand, within Ga0059261_0120 at 114.242 kb on + strand, within Ga0059261_0120 at 114.242 kb on + strand, within Ga0059261_0120 at 114.242 kb on + strand, within Ga0059261_0120 at 114.242 kb on + strand, within Ga0059261_0120 at 114.242 kb on + strand, within Ga0059261_0120 at 114.242 kb on + strand, within Ga0059261_0120 at 114.242 kb on + strand, within Ga0059261_0120 at 114.243 kb on - strand, within Ga0059261_0120 at 114.243 kb on - strand, within Ga0059261_0120 at 114.243 kb on - strand, within Ga0059261_0120 at 114.243 kb on - strand, within Ga0059261_0120 at 114.324 kb on + strand, within Ga0059261_0120 at 114.405 kb on + strand, within Ga0059261_0120 at 114.405 kb on + strand, within Ga0059261_0120 at 114.406 kb on - strand, within Ga0059261_0120 at 114.456 kb on + strand, within Ga0059261_0120 at 114.457 kb on - strand, within Ga0059261_0120 at 114.549 kb on + strand, within Ga0059261_0120 at 114.549 kb on + strand, within Ga0059261_0120 at 114.549 kb on + strand, within Ga0059261_0120 at 114.558 kb on + strand, within Ga0059261_0120 at 114.558 kb on + strand, within Ga0059261_0120 at 114.558 kb on + strand, within Ga0059261_0120 at 114.558 kb on + strand, within Ga0059261_0120 at 114.558 kb on + strand, within Ga0059261_0120 at 114.558 kb on + strand at 114.559 kb on - strand, within Ga0059261_0120 at 114.603 kb on + strand, within Ga0059261_0120 at 114.603 kb on + strand, within Ga0059261_0120 at 114.603 kb on + strand, within Ga0059261_0120 at 114.603 kb on + strand, within Ga0059261_0120 at 114.603 kb on + strand, within Ga0059261_0120 at 114.603 kb on + strand, within Ga0059261_0120 at 114.604 kb on - strand, within Ga0059261_0120 at 114.717 kb on + strand, within Ga0059261_0120 at 114.741 kb on + strand, within Ga0059261_0120 at 114.741 kb on + strand, within Ga0059261_0120 at 114.741 kb on + strand, within Ga0059261_0120 at 114.742 kb on - strand, within Ga0059261_0120 at 114.742 kb on - strand, within Ga0059261_0120 at 114.742 kb on - strand, within Ga0059261_0120 at 114.828 kb on + strand, within Ga0059261_0120 at 114.828 kb on + strand, within Ga0059261_0120 at 114.828 kb on + strand, within Ga0059261_0120 at 114.828 kb on + strand, within Ga0059261_0120 at 114.828 kb on + strand, within Ga0059261_0120 at 114.828 kb on + strand, within Ga0059261_0120 at 114.829 kb on - strand, within Ga0059261_0120 at 114.921 kb on - strand, within Ga0059261_0120
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.0005 mg/ml remove 112,937 - -0.3 112,964 + -1.0 112,964 + +0.1 112,964 + +0.7 112,964 + +0.4 112,965 - +0.7 112,965 - -0.5 112,977 + +0.4 112,978 - -1.2 112,978 - -0.0 112,992 + +0.3 112,993 - +0.1 112,994 + +0.9 112,994 + +0.7 112,995 - +1.2 112,995 - +1.4 112,995 - +0.1 112,995 - -0.9 112,995 - -1.2 112,995 - -1.1 112,995 - -0.3 112,995 - -0.4 112,995 - +0.2 113,028 + -0.8 113,028 + +0.4 113,029 - -0.7 113,112 + -0.2 113,112 + -2.4 113,112 + +0.3 113,112 + -0.8 113,113 - +0.5 113,113 - -1.5 113,113 - -0.3 113,113 - +0.6 113,116 + +0.1 113,116 + -0.4 113,116 + -0.0 113,116 + -0.7 113,116 + -0.2 113,116 + -0.0 113,116 + -0.2 113,116 + +0.1 113,116 + -1.0 113,116 + -0.0 113,116 + -0.9 113,116 + +0.5 113,116 + -0.4 113,116 + -0.2 113,116 + +0.3 113,116 + -0.5 113,117 - +0.2 113,117 - +0.3 113,117 - -0.2 113,117 - +0.4 113,117 - -0.4 113,117 - -0.6 113,117 - -0.3 113,117 - +1.3 113,117 - +0.2 113,117 - +0.7 113,117 - +0.2 113,117 - +0.3 113,117 - +1.7 113,117 - +1.1 113,117 - -0.6 113,117 - +0.5 113,117 - +1.3 113,117 - -0.3 113,118 + -0.2 113,118 + +0.8 113,119 - +1.2 113,122 + +0.3 113,123 - +0.2 113,123 - +0.6 113,123 - +0.8 113,162 + -0.0 113,163 - +0.0 113,163 - -1.0 113,163 - +1.1 113,163 - -0.0 113,163 - +0.0 113,268 + +0.2 113,268 + -0.1 113,268 + +0.7 113,268 + -0.6 113,268 + -0.0 113,268 + +0.3 113,268 + -1.2 113,269 - -0.2 113,269 - +0.8 113,269 - +0.8 113,269 - +0.3 113,269 - -1.1 113,269 - -0.4 113,269 - +0.3 113,269 - +0.2 113,269 - +0.4 113,284 + +1.0 113,284 + +0.3 113,284 + -0.0 113,284 + +1.8 113,284 + -0.5 113,285 - +0.5 113,285 - -0.3 113,285 - -0.2 113,285 - -0.0 113,358 - -0.5 113,358 - +0.2 113,383 + +0.0 113,383 + +0.0 113,383 + -0.3 113,383 + +0.2 113,384 - -0.3 113,384 - +0.1 113,384 - +0.3 113,397 + -0.2 113,397 + +0.3 113,398 - -0.1 113,418 + -0.5 113,418 + +0.7 113,418 + -1.0 113,418 + +1.0 113,418 + -0.5 113,418 + -0.5 113,419 - -0.5 113,419 - -0.1 113,419 - +0.6 113,442 - +0.6 113,538 - +0.2 113,538 - +0.3 113,538 - -0.9 113,553 + -0.7 113,553 + -0.0 113,554 - +1.7 113,554 - +0.4 113,554 - -0.0 113,554 - +0.6 113,575 - -1.2 113,611 + -0.1 113,644 + +0.2 113,644 + +0.3 113,644 + -0.0 113,645 - +0.1 113,645 - +0.2 113,645 - +1.0 113,648 + +0.4 113,649 - +0.7 113,649 - +0.5 113,664 - -0.0 113,706 + +0.4 113,706 + +0.1 113,706 + +0.5 113,707 - +0.5 113,736 + +1.2 113,736 + -0.3 113,737 - +0.1 113,741 - -2.0 113,741 - -0.6 113,744 - +0.3 113,744 - +0.3 113,769 + +0.2 113,769 + +0.7 113,769 + +0.5 113,770 - +0.6 113,833 + -0.6 114,148 + -1.4 114,149 - +0.1 114,149 - +0.7 114,149 - -0.3 114,149 - -0.9 114,155 + -1.2 114,155 + -1.2 114,155 + -0.3 114,155 + -1.2 114,156 - -2.3 114,188 + -1.5 114,188 + -2.0 114,189 - -0.8 114,189 - -0.9 114,189 - +0.3 114,189 - -2.4 114,240 + Ga0059261_0120 0.11 -1.0 114,240 + Ga0059261_0120 0.11 -0.8 114,240 + Ga0059261_0120 0.11 -0.6 114,240 + Ga0059261_0120 0.11 -1.2 114,240 + Ga0059261_0120 0.11 -2.1 114,240 + Ga0059261_0120 0.11 -2.6 114,240 + Ga0059261_0120 0.11 -1.7 114,240 + Ga0059261_0120 0.11 -1.2 114,240 + Ga0059261_0120 0.11 -3.8 114,240 + Ga0059261_0120 0.11 -0.9 114,240 + Ga0059261_0120 0.11 -2.1 114,240 + Ga0059261_0120 0.11 -0.3 114,240 + Ga0059261_0120 0.11 -2.5 114,241 - Ga0059261_0120 0.11 -1.5 114,241 - Ga0059261_0120 0.11 -3.8 114,241 - Ga0059261_0120 0.11 -2.8 114,241 - Ga0059261_0120 0.11 -1.7 114,241 - Ga0059261_0120 0.11 -0.9 114,241 - Ga0059261_0120 0.11 -3.2 114,241 - Ga0059261_0120 0.11 -1.2 114,241 - Ga0059261_0120 0.11 -1.6 114,242 + Ga0059261_0120 0.11 -0.7 114,242 + Ga0059261_0120 0.11 -3.1 114,242 + Ga0059261_0120 0.11 -0.8 114,242 + Ga0059261_0120 0.11 -0.3 114,242 + Ga0059261_0120 0.11 -1.4 114,242 + Ga0059261_0120 0.11 -2.8 114,242 + Ga0059261_0120 0.11 -1.5 114,243 - Ga0059261_0120 0.11 -1.7 114,243 - Ga0059261_0120 0.11 -0.3 114,243 - Ga0059261_0120 0.11 -1.5 114,243 - Ga0059261_0120 0.11 -2.1 114,324 + Ga0059261_0120 0.19 -1.9 114,405 + Ga0059261_0120 0.26 -1.7 114,405 + Ga0059261_0120 0.26 -3.3 114,406 - Ga0059261_0120 0.27 -1.6 114,456 + Ga0059261_0120 0.31 -0.6 114,457 - Ga0059261_0120 0.31 -1.7 114,549 + Ga0059261_0120 0.40 -2.5 114,549 + Ga0059261_0120 0.40 -1.6 114,549 + Ga0059261_0120 0.40 -1.8 114,558 + Ga0059261_0120 0.41 -1.8 114,558 + Ga0059261_0120 0.41 -0.8 114,558 + Ga0059261_0120 0.41 -1.7 114,558 + Ga0059261_0120 0.41 -1.1 114,558 + Ga0059261_0120 0.41 -1.0 114,558 + -1.6 114,559 - Ga0059261_0120 0.41 +0.3 114,603 + Ga0059261_0120 0.45 -1.8 114,603 + Ga0059261_0120 0.45 -2.6 114,603 + Ga0059261_0120 0.45 -0.9 114,603 + Ga0059261_0120 0.45 -1.4 114,603 + Ga0059261_0120 0.45 +0.7 114,603 + Ga0059261_0120 0.45 -2.3 114,604 - Ga0059261_0120 0.45 -0.9 114,717 + Ga0059261_0120 0.56 -2.1 114,741 + Ga0059261_0120 0.58 -1.4 114,741 + Ga0059261_0120 0.58 -2.4 114,741 + Ga0059261_0120 0.58 -2.2 114,742 - Ga0059261_0120 0.58 -1.9 114,742 - Ga0059261_0120 0.58 -0.9 114,742 - Ga0059261_0120 0.58 -1.4 114,828 + Ga0059261_0120 0.67 -2.5 114,828 + Ga0059261_0120 0.67 -0.9 114,828 + Ga0059261_0120 0.67 -1.0 114,828 + Ga0059261_0120 0.67 -0.9 114,828 + Ga0059261_0120 0.67 -1.0 114,828 + Ga0059261_0120 0.67 -1.4 114,829 - Ga0059261_0120 0.67 -1.7 114,921 - Ga0059261_0120 0.75 +0.3
Or see this region's nucleotide sequence