Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04690 and BWI76_RS04695 are separated by 391 nucleotides BWI76_RS04695 and BWI76_RS04700 are separated by 2 nucleotides BWI76_RS04700 and BWI76_RS04705 are separated by 180 nucleotides
BWI76_RS04690: BWI76_RS04690 - transcriptional regulator LeuO, at 978,554 to 979,504
_RS04690
BWI76_RS04695: BWI76_RS04695 - acetolactate synthase 3 large subunit, at 979,896 to 981,620
_RS04695
BWI76_RS04700: BWI76_RS04700 - acetolactate synthase small subunit, at 981,623 to 982,114
_RS04700
BWI76_RS04705: BWI76_RS04705 - DNA-binding transcriptional regulator FruR, at 982,295 to 983,299
_RS04705
Position (kb) 979
980
981
982 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 978.918 kb on - strand, within BWI76_RS04690 at 978.920 kb on + strand, within BWI76_RS04690 at 978.925 kb on + strand, within BWI76_RS04690 at 978.967 kb on - strand, within BWI76_RS04690 at 978.986 kb on - strand, within BWI76_RS04690 at 978.986 kb on - strand, within BWI76_RS04690 at 978.986 kb on - strand, within BWI76_RS04690 at 979.059 kb on + strand, within BWI76_RS04690 at 979.059 kb on + strand, within BWI76_RS04690 at 979.059 kb on + strand, within BWI76_RS04690 at 979.059 kb on + strand, within BWI76_RS04690 at 979.059 kb on + strand, within BWI76_RS04690 at 979.059 kb on + strand, within BWI76_RS04690 at 979.062 kb on + strand, within BWI76_RS04690 at 979.067 kb on + strand, within BWI76_RS04690 at 979.067 kb on - strand, within BWI76_RS04690 at 979.067 kb on - strand, within BWI76_RS04690 at 979.067 kb on - strand, within BWI76_RS04690 at 979.067 kb on - strand, within BWI76_RS04690 at 979.067 kb on - strand, within BWI76_RS04690 at 979.067 kb on - strand, within BWI76_RS04690 at 979.067 kb on - strand, within BWI76_RS04690 at 979.075 kb on - strand, within BWI76_RS04690 at 979.078 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.085 kb on - strand, within BWI76_RS04690 at 979.090 kb on - strand, within BWI76_RS04690 at 979.090 kb on - strand, within BWI76_RS04690 at 979.117 kb on + strand, within BWI76_RS04690 at 979.117 kb on + strand, within BWI76_RS04690 at 979.131 kb on + strand, within BWI76_RS04690 at 979.139 kb on - strand, within BWI76_RS04690 at 979.147 kb on - strand, within BWI76_RS04690 at 979.149 kb on + strand, within BWI76_RS04690 at 979.149 kb on + strand, within BWI76_RS04690 at 979.157 kb on - strand, within BWI76_RS04690 at 979.186 kb on + strand, within BWI76_RS04690 at 979.187 kb on - strand, within BWI76_RS04690 at 979.203 kb on + strand, within BWI76_RS04690 at 979.205 kb on + strand, within BWI76_RS04690 at 979.219 kb on - strand, within BWI76_RS04690 at 979.229 kb on - strand, within BWI76_RS04690 at 979.231 kb on + strand, within BWI76_RS04690 at 979.237 kb on + strand, within BWI76_RS04690 at 979.237 kb on + strand, within BWI76_RS04690 at 979.237 kb on + strand at 979.239 kb on - strand, within BWI76_RS04690 at 979.245 kb on - strand, within BWI76_RS04690 at 979.245 kb on - strand, within BWI76_RS04690 at 979.245 kb on - strand, within BWI76_RS04690 at 979.245 kb on - strand, within BWI76_RS04690 at 979.245 kb on - strand, within BWI76_RS04690 at 979.256 kb on - strand, within BWI76_RS04690 at 979.262 kb on + strand, within BWI76_RS04690 at 979.276 kb on + strand, within BWI76_RS04690 at 979.276 kb on + strand, within BWI76_RS04690 at 979.288 kb on + strand, within BWI76_RS04690 at 979.310 kb on + strand, within BWI76_RS04690 at 979.318 kb on - strand, within BWI76_RS04690 at 979.320 kb on + strand, within BWI76_RS04690 at 979.323 kb on - strand, within BWI76_RS04690 at 979.329 kb on + strand, within BWI76_RS04690 at 979.329 kb on + strand, within BWI76_RS04690 at 979.329 kb on + strand, within BWI76_RS04690 at 979.329 kb on + strand, within BWI76_RS04690 at 979.329 kb on + strand, within BWI76_RS04690 at 979.329 kb on + strand, within BWI76_RS04690 at 979.334 kb on + strand, within BWI76_RS04690 at 979.337 kb on - strand, within BWI76_RS04690 at 979.337 kb on - strand, within BWI76_RS04690 at 979.337 kb on - strand, within BWI76_RS04690 at 979.337 kb on - strand, within BWI76_RS04690 at 979.337 kb on - strand, within BWI76_RS04690 at 979.339 kb on + strand, within BWI76_RS04690 at 979.339 kb on + strand, within BWI76_RS04690 at 979.339 kb on + strand, within BWI76_RS04690 at 979.342 kb on - strand, within BWI76_RS04690 at 979.344 kb on + strand, within BWI76_RS04690 at 979.347 kb on - strand, within BWI76_RS04690 at 979.347 kb on - strand, within BWI76_RS04690 at 979.347 kb on - strand, within BWI76_RS04690 at 979.390 kb on - strand, within BWI76_RS04690 at 979.410 kb on + strand at 979.430 kb on - strand at 979.430 kb on - strand at 979.439 kb on - strand at 979.446 kb on + strand at 979.450 kb on + strand at 979.451 kb on + strand at 979.457 kb on + strand at 979.457 kb on + strand at 979.457 kb on + strand at 979.459 kb on - strand at 979.507 kb on - strand at 979.525 kb on + strand at 979.527 kb on - strand at 979.533 kb on - strand at 979.535 kb on - strand at 979.577 kb on - strand at 979.593 kb on + strand at 979.694 kb on + strand at 979.701 kb on + strand at 979.701 kb on + strand at 979.702 kb on - strand at 979.702 kb on - strand at 979.702 kb on - strand at 979.709 kb on + strand at 979.709 kb on + strand at 979.714 kb on + strand at 979.717 kb on - strand at 979.731 kb on + strand at 979.731 kb on + strand at 979.739 kb on - strand at 979.739 kb on - strand at 979.748 kb on + strand at 979.777 kb on + strand at 979.777 kb on + strand at 979.777 kb on + strand at 979.777 kb on + strand at 979.784 kb on - strand at 979.784 kb on - strand at 979.784 kb on - strand at 979.785 kb on - strand at 979.785 kb on - strand at 979.798 kb on + strand at 979.798 kb on + strand at 979.798 kb on + strand at 979.798 kb on + strand at 979.798 kb on + strand at 979.798 kb on + strand at 979.798 kb on + strand at 979.798 kb on + strand at 979.805 kb on + strand at 979.806 kb on - strand at 979.806 kb on - strand at 979.806 kb on - strand at 979.806 kb on - strand at 979.810 kb on + strand at 979.835 kb on + strand at 979.839 kb on - strand at 979.909 kb on - strand at 979.958 kb on + strand at 980.009 kb on - strand at 980.114 kb on - strand, within BWI76_RS04695 at 980.119 kb on - strand, within BWI76_RS04695 at 980.119 kb on - strand, within BWI76_RS04695 at 980.446 kb on + strand, within BWI76_RS04695 at 980.488 kb on - strand, within BWI76_RS04695 at 980.488 kb on - strand, within BWI76_RS04695 at 980.578 kb on - strand, within BWI76_RS04695 at 980.581 kb on - strand, within BWI76_RS04695 at 980.598 kb on - strand, within BWI76_RS04695 at 980.693 kb on + strand at 980.695 kb on + strand, within BWI76_RS04695 at 980.773 kb on + strand, within BWI76_RS04695 at 980.801 kb on - strand, within BWI76_RS04695 at 980.887 kb on + strand at 980.981 kb on - strand, within BWI76_RS04695 at 981.034 kb on - strand, within BWI76_RS04695 at 981.087 kb on + strand, within BWI76_RS04695 at 981.107 kb on + strand, within BWI76_RS04695 at 981.115 kb on - strand, within BWI76_RS04695 at 981.115 kb on - strand, within BWI76_RS04695 at 981.115 kb on - strand, within BWI76_RS04695 at 981.274 kb on - strand, within BWI76_RS04695 at 981.303 kb on + strand, within BWI76_RS04695 at 981.351 kb on + strand, within BWI76_RS04695 at 981.364 kb on - strand, within BWI76_RS04695 at 981.388 kb on - strand, within BWI76_RS04695 at 981.388 kb on - strand, within BWI76_RS04695 at 981.542 kb on - strand at 981.551 kb on + strand at 981.551 kb on + strand at 981.551 kb on + strand at 981.559 kb on - strand at 981.593 kb on - strand at 981.617 kb on - strand at 981.665 kb on + strand at 981.801 kb on + strand, within BWI76_RS04700 at 981.884 kb on - strand, within BWI76_RS04700 at 982.063 kb on + strand, within BWI76_RS04700 at 982.068 kb on + strand at 982.222 kb on + strand at 982.222 kb on + strand at 982.340 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 978,918 - BWI76_RS04690 0.38 +0.9 978,920 + BWI76_RS04690 0.38 -0.6 978,925 + BWI76_RS04690 0.39 +0.9 978,967 - BWI76_RS04690 0.43 -0.7 978,986 - BWI76_RS04690 0.45 +0.1 978,986 - BWI76_RS04690 0.45 +0.3 978,986 - BWI76_RS04690 0.45 -2.3 979,059 + BWI76_RS04690 0.53 -0.8 979,059 + BWI76_RS04690 0.53 -1.4 979,059 + BWI76_RS04690 0.53 +0.7 979,059 + BWI76_RS04690 0.53 +0.4 979,059 + BWI76_RS04690 0.53 +0.2 979,059 + BWI76_RS04690 0.53 +0.8 979,062 + BWI76_RS04690 0.53 +3.2 979,067 + BWI76_RS04690 0.54 +0.7 979,067 - BWI76_RS04690 0.54 +1.0 979,067 - BWI76_RS04690 0.54 +1.4 979,067 - BWI76_RS04690 0.54 -0.1 979,067 - BWI76_RS04690 0.54 +0.5 979,067 - BWI76_RS04690 0.54 -1.2 979,067 - BWI76_RS04690 0.54 +1.6 979,067 - BWI76_RS04690 0.54 -0.0 979,075 - BWI76_RS04690 0.55 -0.4 979,078 + BWI76_RS04690 0.55 +0.0 979,082 + BWI76_RS04690 0.56 -0.6 979,082 + BWI76_RS04690 0.56 +0.1 979,082 + BWI76_RS04690 0.56 +0.3 979,082 + BWI76_RS04690 0.56 -0.7 979,082 + BWI76_RS04690 0.56 -0.0 979,082 + BWI76_RS04690 0.56 +1.8 979,082 + BWI76_RS04690 0.56 -0.8 979,082 + BWI76_RS04690 0.56 -0.1 979,082 + BWI76_RS04690 0.56 +0.4 979,082 + BWI76_RS04690 0.56 -0.5 979,082 + BWI76_RS04690 0.56 +0.5 979,082 + BWI76_RS04690 0.56 -0.3 979,082 + BWI76_RS04690 0.56 -0.3 979,082 + BWI76_RS04690 0.56 -0.1 979,082 + BWI76_RS04690 0.56 -0.2 979,085 - BWI76_RS04690 0.56 -1.2 979,090 - BWI76_RS04690 0.56 +1.9 979,090 - BWI76_RS04690 0.56 +1.1 979,117 + BWI76_RS04690 0.59 -0.4 979,117 + BWI76_RS04690 0.59 -0.7 979,131 + BWI76_RS04690 0.61 +0.4 979,139 - BWI76_RS04690 0.62 +0.7 979,147 - BWI76_RS04690 0.62 -0.4 979,149 + BWI76_RS04690 0.63 -0.7 979,149 + BWI76_RS04690 0.63 +0.1 979,157 - BWI76_RS04690 0.63 -0.1 979,186 + BWI76_RS04690 0.66 -1.1 979,187 - BWI76_RS04690 0.67 -1.1 979,203 + BWI76_RS04690 0.68 +0.3 979,205 + BWI76_RS04690 0.68 +0.5 979,219 - BWI76_RS04690 0.70 -0.0 979,229 - BWI76_RS04690 0.71 +0.1 979,231 + BWI76_RS04690 0.71 +0.9 979,237 + BWI76_RS04690 0.72 +0.7 979,237 + BWI76_RS04690 0.72 +0.5 979,237 + -0.0 979,239 - BWI76_RS04690 0.72 -1.2 979,245 - BWI76_RS04690 0.73 +0.0 979,245 - BWI76_RS04690 0.73 -0.5 979,245 - BWI76_RS04690 0.73 -1.8 979,245 - BWI76_RS04690 0.73 +0.4 979,245 - BWI76_RS04690 0.73 +1.0 979,256 - BWI76_RS04690 0.74 +0.9 979,262 + BWI76_RS04690 0.74 -0.3 979,276 + BWI76_RS04690 0.76 -0.1 979,276 + BWI76_RS04690 0.76 +0.2 979,288 + BWI76_RS04690 0.77 -0.5 979,310 + BWI76_RS04690 0.79 +0.9 979,318 - BWI76_RS04690 0.80 -0.1 979,320 + BWI76_RS04690 0.81 +0.9 979,323 - BWI76_RS04690 0.81 -0.1 979,329 + BWI76_RS04690 0.81 -0.7 979,329 + BWI76_RS04690 0.81 -1.4 979,329 + BWI76_RS04690 0.81 +0.5 979,329 + BWI76_RS04690 0.81 -0.1 979,329 + BWI76_RS04690 0.81 +0.1 979,329 + BWI76_RS04690 0.81 +0.5 979,334 + BWI76_RS04690 0.82 +0.6 979,337 - BWI76_RS04690 0.82 +0.5 979,337 - BWI76_RS04690 0.82 -0.9 979,337 - BWI76_RS04690 0.82 -1.0 979,337 - BWI76_RS04690 0.82 -0.1 979,337 - BWI76_RS04690 0.82 +0.8 979,339 + BWI76_RS04690 0.83 +0.2 979,339 + BWI76_RS04690 0.83 +0.1 979,339 + BWI76_RS04690 0.83 -1.0 979,342 - BWI76_RS04690 0.83 -0.6 979,344 + BWI76_RS04690 0.83 -1.2 979,347 - BWI76_RS04690 0.83 +0.3 979,347 - BWI76_RS04690 0.83 +0.3 979,347 - BWI76_RS04690 0.83 +0.1 979,390 - BWI76_RS04690 0.88 +0.6 979,410 + +0.2 979,430 - -0.6 979,430 - +0.2 979,439 - +0.9 979,446 + +0.1 979,450 + -0.7 979,451 + +1.7 979,457 + -0.0 979,457 + +1.0 979,457 + +0.7 979,459 - -0.5 979,507 - +0.3 979,525 + -1.1 979,527 - +0.7 979,533 - -0.3 979,535 - -0.9 979,577 - +0.6 979,593 + +1.6 979,694 + +1.6 979,701 + -0.1 979,701 + -2.0 979,702 - -0.2 979,702 - +0.4 979,702 - -1.2 979,709 + +0.6 979,709 + +0.1 979,714 + -0.1 979,717 - +1.1 979,731 + -1.3 979,731 + +0.1 979,739 - -0.4 979,739 - -0.1 979,748 + +0.7 979,777 + -0.2 979,777 + +1.0 979,777 + -0.2 979,777 + -2.1 979,784 - +0.1 979,784 - -0.1 979,784 - -0.6 979,785 - +0.1 979,785 - -0.4 979,798 + -0.5 979,798 + -0.3 979,798 + +0.3 979,798 + -0.4 979,798 + +0.0 979,798 + +1.4 979,798 + -0.6 979,798 + +1.3 979,805 + +0.3 979,806 - -1.4 979,806 - -0.5 979,806 - -2.6 979,806 - +0.2 979,810 + -0.6 979,835 + -0.6 979,839 - +0.6 979,909 - +0.1 979,958 + +0.2 980,009 - -0.1 980,114 - BWI76_RS04695 0.13 +0.4 980,119 - BWI76_RS04695 0.13 +0.3 980,119 - BWI76_RS04695 0.13 -0.2 980,446 + BWI76_RS04695 0.32 -0.1 980,488 - BWI76_RS04695 0.34 +0.7 980,488 - BWI76_RS04695 0.34 -1.0 980,578 - BWI76_RS04695 0.40 -1.2 980,581 - BWI76_RS04695 0.40 -0.6 980,598 - BWI76_RS04695 0.41 -0.1 980,693 + +0.6 980,695 + BWI76_RS04695 0.46 -0.4 980,773 + BWI76_RS04695 0.51 -0.3 980,801 - BWI76_RS04695 0.52 -0.4 980,887 + +0.6 980,981 - BWI76_RS04695 0.63 -0.1 981,034 - BWI76_RS04695 0.66 +0.1 981,087 + BWI76_RS04695 0.69 -0.4 981,107 + BWI76_RS04695 0.70 -0.1 981,115 - BWI76_RS04695 0.71 -1.2 981,115 - BWI76_RS04695 0.71 +0.6 981,115 - BWI76_RS04695 0.71 +0.7 981,274 - BWI76_RS04695 0.80 -0.1 981,303 + BWI76_RS04695 0.82 -0.2 981,351 + BWI76_RS04695 0.84 +0.1 981,364 - BWI76_RS04695 0.85 +0.6 981,388 - BWI76_RS04695 0.86 +1.7 981,388 - BWI76_RS04695 0.86 +0.6 981,542 - +0.3 981,551 + -0.5 981,551 + -1.4 981,551 + -0.5 981,559 - -0.2 981,593 - -0.3 981,617 - -0.4 981,665 + -0.7 981,801 + BWI76_RS04700 0.36 -0.9 981,884 - BWI76_RS04700 0.53 +0.0 982,063 + BWI76_RS04700 0.89 -0.8 982,068 + -0.1 982,222 + -0.9 982,222 + -0.3 982,340 + -1.9
Or see this region's nucleotide sequence