Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_696 and Pf1N1B4_697 are separated by 159 nucleotides Pf1N1B4_697 and Pf1N1B4_698 are separated by 115 nucleotides Pf1N1B4_698 and Pf1N1B4_699 are separated by 155 nucleotides
Pf1N1B4_696 - Acetolactate synthase, large subunit (EC 2.2.1.6), at 794,978 to 796,615
_696
Pf1N1B4_697 - Glycine cleavage system transcriptional activator, at 796,775 to 797,656
_697
Pf1N1B4_698 - Rrf2-linked NADH-flavin reductase, at 797,772 to 798,386
_698
Pf1N1B4_699 - Metallo-beta-lactamase superfamily protein PA0057, at 798,542 to 799,423
_699
Position (kb) 796
797
798 Strain fitness (log2 ratio) -1
0
1
2 at 796.356 kb on + strand, within Pf1N1B4_696 at 796.356 kb on + strand, within Pf1N1B4_696 at 796.583 kb on + strand at 796.595 kb on + strand at 796.595 kb on + strand at 796.595 kb on + strand at 796.595 kb on + strand at 796.595 kb on + strand at 796.595 kb on + strand at 796.596 kb on - strand at 796.596 kb on - strand at 796.596 kb on - strand at 796.663 kb on + strand at 796.663 kb on + strand at 796.664 kb on - strand at 796.664 kb on - strand at 796.664 kb on - strand at 796.729 kb on + strand at 796.739 kb on + strand at 796.740 kb on - strand at 796.740 kb on - strand at 796.742 kb on + strand at 796.743 kb on - strand at 796.743 kb on - strand at 796.761 kb on + strand at 796.762 kb on - strand at 796.762 kb on - strand at 796.762 kb on - strand at 796.762 kb on - strand at 796.919 kb on + strand, within Pf1N1B4_697 at 797.204 kb on + strand, within Pf1N1B4_697 at 797.204 kb on + strand, within Pf1N1B4_697 at 797.204 kb on + strand, within Pf1N1B4_697 at 797.204 kb on + strand, within Pf1N1B4_697 at 797.204 kb on + strand, within Pf1N1B4_697 at 797.204 kb on + strand, within Pf1N1B4_697 at 797.204 kb on + strand, within Pf1N1B4_697 at 797.204 kb on + strand, within Pf1N1B4_697 at 797.204 kb on + strand, within Pf1N1B4_697 at 797.204 kb on + strand, within Pf1N1B4_697 at 797.205 kb on - strand, within Pf1N1B4_697 at 797.567 kb on + strand, within Pf1N1B4_697 at 797.570 kb on + strand at 797.787 kb on - strand at 797.804 kb on - strand at 797.804 kb on - strand at 797.804 kb on - strand at 797.855 kb on + strand, within Pf1N1B4_698 at 797.856 kb on - strand, within Pf1N1B4_698 at 797.856 kb on - strand, within Pf1N1B4_698 at 797.912 kb on + strand, within Pf1N1B4_698 at 797.990 kb on + strand, within Pf1N1B4_698 at 797.991 kb on - strand, within Pf1N1B4_698 at 797.991 kb on - strand, within Pf1N1B4_698 at 798.028 kb on + strand, within Pf1N1B4_698 at 798.028 kb on + strand, within Pf1N1B4_698 at 798.028 kb on + strand, within Pf1N1B4_698 at 798.028 kb on + strand, within Pf1N1B4_698 at 798.029 kb on - strand, within Pf1N1B4_698 at 798.029 kb on - strand, within Pf1N1B4_698 at 798.029 kb on - strand, within Pf1N1B4_698
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 796,356 + Pf1N1B4_696 0.84 -0.7 796,356 + Pf1N1B4_696 0.84 -0.3 796,583 + +0.6 796,595 + +1.0 796,595 + +0.7 796,595 + +0.5 796,595 + +1.0 796,595 + +0.5 796,595 + +0.5 796,596 - -0.5 796,596 - -0.1 796,596 - +1.0 796,663 + +0.3 796,663 + -0.5 796,664 - +0.4 796,664 - +0.3 796,664 - -1.3 796,729 + -0.2 796,739 + -0.3 796,740 - -0.5 796,740 - -0.5 796,742 + -0.5 796,743 - +0.4 796,743 - +1.6 796,761 + +0.4 796,762 - +0.0 796,762 - -0.2 796,762 - -0.5 796,762 - -0.1 796,919 + Pf1N1B4_697 0.16 -0.1 797,204 + Pf1N1B4_697 0.49 +0.8 797,204 + Pf1N1B4_697 0.49 -0.4 797,204 + Pf1N1B4_697 0.49 +0.0 797,204 + Pf1N1B4_697 0.49 +0.2 797,204 + Pf1N1B4_697 0.49 +0.7 797,204 + Pf1N1B4_697 0.49 +0.2 797,204 + Pf1N1B4_697 0.49 -0.8 797,204 + Pf1N1B4_697 0.49 -1.2 797,204 + Pf1N1B4_697 0.49 +0.0 797,204 + Pf1N1B4_697 0.49 -1.3 797,205 - Pf1N1B4_697 0.49 +0.6 797,567 + Pf1N1B4_697 0.90 -1.5 797,570 + +0.0 797,787 - -0.3 797,804 - -1.1 797,804 - +1.2 797,804 - +2.0 797,855 + Pf1N1B4_698 0.13 -0.1 797,856 - Pf1N1B4_698 0.14 -0.2 797,856 - Pf1N1B4_698 0.14 +1.5 797,912 + Pf1N1B4_698 0.23 +0.4 797,990 + Pf1N1B4_698 0.35 +0.5 797,991 - Pf1N1B4_698 0.36 +0.2 797,991 - Pf1N1B4_698 0.36 -0.8 798,028 + Pf1N1B4_698 0.42 +0.7 798,028 + Pf1N1B4_698 0.42 +1.0 798,028 + Pf1N1B4_698 0.42 -0.1 798,028 + Pf1N1B4_698 0.42 -0.1 798,029 - Pf1N1B4_698 0.42 -0.1 798,029 - Pf1N1B4_698 0.42 -1.0 798,029 - Pf1N1B4_698 0.42 -0.5
Or see this region's nucleotide sequence