Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_2180 and Pf1N1B4_2181 are separated by 343 nucleotides Pf1N1B4_2181 and Pf1N1B4_2182 are separated by 125 nucleotides Pf1N1B4_2182 and Pf1N1B4_2183 are separated by 119 nucleotides
Pf1N1B4_2180 - DNA-binding protein inhibitor Id-2-related protein, at 2,492,845 to 2,493,090
_2180
Pf1N1B4_2181 - FIG00954215: hypothetical protein, at 2,493,434 to 2,493,718
_2181
Pf1N1B4_2182 - Glutathione S-transferase N-terminal domain protein (EC 2.5.1.18), at 2,493,844 to 2,494,503
_2182
Pf1N1B4_2183 - Argininosuccinate lyase (EC 4.3.2.1), at 2,494,623 to 2,496,017
_2183
Position (kb)
2493
2494
2495 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 2492.924 kb on + strand, within Pf1N1B4_2180 at 2493.081 kb on + strand at 2493.090 kb on + strand at 2493.090 kb on + strand at 2493.090 kb on + strand at 2493.090 kb on + strand at 2493.090 kb on + strand at 2493.091 kb on - strand at 2493.091 kb on - strand at 2493.091 kb on - strand at 2493.091 kb on - strand at 2493.091 kb on - strand at 2493.091 kb on - strand at 2493.091 kb on - strand at 2493.091 kb on - strand at 2493.108 kb on + strand at 2493.108 kb on + strand at 2493.108 kb on + strand at 2493.131 kb on + strand at 2493.169 kb on - strand at 2493.205 kb on - strand at 2493.205 kb on - strand at 2493.246 kb on + strand at 2493.246 kb on + strand at 2493.246 kb on + strand at 2493.246 kb on + strand at 2493.246 kb on + strand at 2493.246 kb on + strand at 2493.247 kb on - strand at 2493.247 kb on - strand at 2493.247 kb on - strand at 2493.247 kb on - strand at 2493.247 kb on - strand at 2493.247 kb on - strand at 2493.247 kb on - strand at 2493.344 kb on - strand at 2493.382 kb on - strand at 2493.402 kb on + strand at 2493.402 kb on + strand at 2493.402 kb on + strand at 2493.403 kb on - strand at 2493.403 kb on - strand at 2493.403 kb on - strand at 2493.413 kb on + strand at 2493.414 kb on - strand at 2493.414 kb on - strand at 2493.414 kb on - strand at 2493.414 kb on - strand at 2493.435 kb on + strand at 2493.435 kb on + strand at 2493.435 kb on + strand at 2493.436 kb on - strand at 2493.436 kb on - strand at 2493.736 kb on - strand at 2493.749 kb on + strand at 2493.749 kb on + strand at 2493.750 kb on - strand at 2493.750 kb on - strand at 2493.799 kb on + strand at 2493.799 kb on + strand at 2493.799 kb on + strand at 2493.799 kb on + strand at 2493.799 kb on + strand at 2493.799 kb on + strand at 2493.799 kb on + strand at 2493.799 kb on + strand at 2493.800 kb on - strand at 2493.800 kb on - strand at 2493.800 kb on - strand at 2493.800 kb on - strand at 2493.800 kb on - strand at 2493.800 kb on - strand at 2493.800 kb on - strand at 2493.801 kb on + strand at 2493.801 kb on + strand at 2493.838 kb on + strand at 2493.838 kb on + strand at 2493.838 kb on + strand at 2493.838 kb on + strand at 2493.842 kb on + strand at 2493.842 kb on + strand at 2493.842 kb on + strand at 2493.842 kb on + strand at 2493.842 kb on + strand at 2493.842 kb on + strand at 2493.842 kb on + strand at 2493.842 kb on + strand at 2493.842 kb on + strand at 2493.842 kb on + strand at 2493.842 kb on + strand at 2493.842 kb on + strand at 2493.842 kb on + strand at 2493.842 kb on + strand at 2493.842 kb on + strand at 2493.842 kb on + strand at 2493.843 kb on - strand at 2493.843 kb on - strand at 2493.843 kb on - strand at 2493.843 kb on - strand at 2493.843 kb on - strand at 2493.843 kb on - strand at 2493.843 kb on - strand at 2493.843 kb on - strand at 2493.843 kb on - strand at 2493.843 kb on - strand at 2493.843 kb on - strand at 2493.843 kb on - strand at 2493.843 kb on - strand at 2493.843 kb on - strand at 2493.843 kb on - strand at 2493.843 kb on - strand at 2493.843 kb on - strand at 2493.843 kb on - strand at 2493.843 kb on - strand at 2493.877 kb on + strand at 2493.877 kb on + strand at 2493.880 kb on + strand at 2493.880 kb on + strand at 2493.880 kb on + strand at 2493.880 kb on + strand at 2493.880 kb on + strand at 2493.881 kb on - strand at 2493.881 kb on - strand at 2493.881 kb on - strand at 2494.138 kb on + strand, within Pf1N1B4_2182 at 2494.138 kb on + strand, within Pf1N1B4_2182 at 2494.138 kb on + strand, within Pf1N1B4_2182 at 2494.138 kb on + strand, within Pf1N1B4_2182 at 2494.138 kb on + strand, within Pf1N1B4_2182 at 2494.138 kb on + strand, within Pf1N1B4_2182 at 2494.138 kb on + strand, within Pf1N1B4_2182 at 2494.138 kb on + strand, within Pf1N1B4_2182 at 2494.139 kb on - strand at 2494.139 kb on - strand, within Pf1N1B4_2182 at 2494.139 kb on - strand, within Pf1N1B4_2182 at 2494.139 kb on - strand, within Pf1N1B4_2182 at 2494.166 kb on - strand, within Pf1N1B4_2182 at 2494.276 kb on + strand, within Pf1N1B4_2182 at 2494.276 kb on + strand, within Pf1N1B4_2182 at 2494.312 kb on + strand, within Pf1N1B4_2182 at 2494.312 kb on + strand, within Pf1N1B4_2182 at 2494.313 kb on - strand, within Pf1N1B4_2182 at 2494.313 kb on - strand, within Pf1N1B4_2182 at 2494.321 kb on + strand, within Pf1N1B4_2182 at 2494.322 kb on - strand at 2494.502 kb on - strand at 2494.509 kb on + strand at 2494.570 kb on - strand at 2494.740 kb on + strand at 2494.740 kb on + strand at 2494.740 kb on + strand at 2494.740 kb on + strand at 2494.741 kb on - strand at 2494.741 kb on - strand at 2494.741 kb on - strand at 2494.741 kb on - strand at 2494.741 kb on - strand at 2494.822 kb on + strand, within Pf1N1B4_2183 at 2494.823 kb on - strand, within Pf1N1B4_2183 at 2494.885 kb on + strand, within Pf1N1B4_2183 at 2495.389 kb on + strand, within Pf1N1B4_2183
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 2,492,924 + Pf1N1B4_2180 0.32 +0.7 2,493,081 + -0.0 2,493,090 + +1.1 2,493,090 + -0.7 2,493,090 + -0.6 2,493,090 + -0.2 2,493,090 + +0.1 2,493,091 - -0.4 2,493,091 - +0.3 2,493,091 - +1.6 2,493,091 - +1.2 2,493,091 - +0.0 2,493,091 - -1.0 2,493,091 - +1.2 2,493,091 - -0.1 2,493,108 + +1.6 2,493,108 + +1.0 2,493,108 + -0.7 2,493,131 + -1.2 2,493,169 - -0.8 2,493,205 - +0.2 2,493,205 - +0.1 2,493,246 + +0.5 2,493,246 + +0.6 2,493,246 + +0.3 2,493,246 + +2.7 2,493,246 + -0.9 2,493,246 + +1.0 2,493,247 - +0.3 2,493,247 - +0.6 2,493,247 - +0.3 2,493,247 - +1.1 2,493,247 - -0.8 2,493,247 - +0.6 2,493,247 - -0.3 2,493,344 - -0.1 2,493,382 - -0.6 2,493,402 + -1.5 2,493,402 + +0.8 2,493,402 + +0.4 2,493,403 - +0.3 2,493,403 - -0.5 2,493,403 - -1.7 2,493,413 + -0.9 2,493,414 - -0.2 2,493,414 - +0.3 2,493,414 - -0.2 2,493,414 - +0.2 2,493,435 + -1.0 2,493,435 + +0.2 2,493,435 + +0.1 2,493,436 - -0.7 2,493,436 - +0.4 2,493,736 - -1.4 2,493,749 + -0.9 2,493,749 + -1.4 2,493,750 - +0.2 2,493,750 - +0.1 2,493,799 + +1.8 2,493,799 + +0.5 2,493,799 + +1.0 2,493,799 + -0.2 2,493,799 + +1.3 2,493,799 + -0.5 2,493,799 + -0.3 2,493,799 + +0.2 2,493,800 - -1.8 2,493,800 - -0.2 2,493,800 - +0.4 2,493,800 - +0.3 2,493,800 - +0.2 2,493,800 - +1.1 2,493,800 - +0.3 2,493,801 + +0.1 2,493,801 + +0.1 2,493,838 + -0.4 2,493,838 + -0.4 2,493,838 + +0.1 2,493,838 + -0.3 2,493,842 + -0.5 2,493,842 + -0.1 2,493,842 + +0.0 2,493,842 + -0.2 2,493,842 + +0.2 2,493,842 + -1.1 2,493,842 + +0.2 2,493,842 + +0.9 2,493,842 + -1.0 2,493,842 + +0.9 2,493,842 + -1.6 2,493,842 + -0.1 2,493,842 + +0.8 2,493,842 + -1.2 2,493,842 + -0.9 2,493,842 + +0.1 2,493,843 - +1.1 2,493,843 - -0.8 2,493,843 - -0.8 2,493,843 - +0.1 2,493,843 - +0.3 2,493,843 - +0.1 2,493,843 - +0.6 2,493,843 - -0.2 2,493,843 - -0.7 2,493,843 - +0.2 2,493,843 - -0.0 2,493,843 - -0.8 2,493,843 - +0.3 2,493,843 - -1.5 2,493,843 - +0.6 2,493,843 - -1.1 2,493,843 - +0.3 2,493,843 - -0.5 2,493,843 - -0.2 2,493,877 + -1.2 2,493,877 + +0.5 2,493,880 + +0.5 2,493,880 + -0.1 2,493,880 + -0.1 2,493,880 + +0.2 2,493,880 + -0.3 2,493,881 - -0.5 2,493,881 - -2.7 2,493,881 - +0.1 2,494,138 + Pf1N1B4_2182 0.45 +0.7 2,494,138 + Pf1N1B4_2182 0.45 -0.1 2,494,138 + Pf1N1B4_2182 0.45 +1.5 2,494,138 + Pf1N1B4_2182 0.45 -0.2 2,494,138 + Pf1N1B4_2182 0.45 -1.0 2,494,138 + Pf1N1B4_2182 0.45 -0.4 2,494,138 + Pf1N1B4_2182 0.45 +1.0 2,494,138 + Pf1N1B4_2182 0.45 -0.2 2,494,139 - +1.3 2,494,139 - Pf1N1B4_2182 0.45 +0.6 2,494,139 - Pf1N1B4_2182 0.45 +0.5 2,494,139 - Pf1N1B4_2182 0.45 +0.1 2,494,166 - Pf1N1B4_2182 0.49 +0.3 2,494,276 + Pf1N1B4_2182 0.65 +0.8 2,494,276 + Pf1N1B4_2182 0.65 -0.1 2,494,312 + Pf1N1B4_2182 0.71 +0.3 2,494,312 + Pf1N1B4_2182 0.71 +0.8 2,494,313 - Pf1N1B4_2182 0.71 -0.2 2,494,313 - Pf1N1B4_2182 0.71 +0.1 2,494,321 + Pf1N1B4_2182 0.72 -0.5 2,494,322 - -0.2 2,494,502 - +0.8 2,494,509 + +0.1 2,494,570 - +0.8 2,494,740 + -1.8 2,494,740 + -1.8 2,494,740 + -1.0 2,494,740 + -1.0 2,494,741 - -0.0 2,494,741 - +0.2 2,494,741 - -4.9 2,494,741 - -1.0 2,494,741 - -1.5 2,494,822 + Pf1N1B4_2183 0.14 -1.5 2,494,823 - Pf1N1B4_2183 0.14 -0.7 2,494,885 + Pf1N1B4_2183 0.19 -1.7 2,495,389 + Pf1N1B4_2183 0.55 -2.1
Or see this region's nucleotide sequence