Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0088

Experiment: Formate/Acetate-Sulfate (60/30-30 mM) with Casaminos 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/30-30 mM) with Casaminos 0.05%
111,502	+				-0.8
111,508	-				-0.3
111,508	-				+2.2
111,510	-				+0.3
111,513	+				-0.3
111,632	+				-1.0
111,687	+				-0.9
111,729	+				-1.0
111,803	+				-0.0
111,819	+				+1.2
111,860	+				-0.3
111,938	-				+0.7
111,952	-		DVU0087	0.10	+0.2
111,965	+		DVU0087	0.13	-0.1
112,013	+		DVU0087	0.22	+1.1
112,146	-		DVU0087	0.49	+0.6
112,241	-		DVU0087	0.68	-0.3
112,356	+				+0.0
112,404	+				+0.0
112,412	-				-0.3
112,451	+				-0.7
112,513	+				-0.6
112,515	+				-0.5
112,515	+				-0.3
112,744	-		DVU0088	0.24	+0.5
112,857	+		DVU0088	0.31	+0.1
112,964	+		DVU0088	0.38	+0.7
113,046	+		DVU0088	0.44	-0.1
113,058	+		DVU0088	0.45	+0.2
113,162	-		DVU0088	0.52	+0.7
113,177	-		DVU0088	0.53	-0.1
113,177	-		DVU0088	0.53	+0.2
113,285	+		DVU0088	0.60	-0.9
113,345	+		DVU0088	0.64	+1.5
113,353	-		DVU0088	0.65	-0.8
113,490	+		DVU0088	0.74	-0.3
113,490	-		DVU0088	0.74	+0.3
113,490	-		DVU0088	0.74	-0.3
113,492	+		DVU0088	0.74	-1.3
113,500	-		DVU0088	0.74	-0.4
113,500	-		DVU0088	0.74	+0.3
113,500	-		DVU0088	0.74	+0.1
113,590	-		DVU0088	0.80	-0.1
113,602	+		DVU0088	0.81	+0.2
113,796	-				+0.1
113,837	-				+1.8
113,867	-				+0.4
113,867	-				-0.2
113,910	+				+0.1
113,922	+				-0.0
113,941	-				-0.4
113,954	+				+0.2
113,955	+				-0.1
113,963	-				+0.1
114,092	+		DVU0089	0.19	-2.0
114,304	+		DVU0089	0.46	+0.1
114,351	-		DVU0089	0.52	-0.2
114,405	-		DVU0089	0.58	-0.0
114,441	+		DVU0089	0.63	-0.8
114,464	+		DVU0089	0.66	-0.0
114,508	+		DVU0089	0.71	-0.2
114,521	-		DVU0089	0.73	+0.6
114,600	+		DVU0089	0.83	-0.3
114,600	+		DVU0089	0.83	+0.2
114,600	+		DVU0089	0.83	+0.0
114,608	-		DVU0089	0.84	-0.4
114,720	+				+0.1
114,848	+				-0.0