Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3208
Experiment: Formate/Acetate-Sulfate (60/30-30 mM) with Casaminos 0.05%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfate (60/30-30 mM) with Casaminos 0.05% |
|---|---|---|---|---|---|
| remove | |||||
| 3,374,772 | + | DVU3208 | 0.62 | -0.9 | |
| 3,374,968 | - | DVU3208 | 0.82 | +0.1 | |
| 3,375,007 | + | DVU3208 | 0.86 | -1.2 | |
| 3,375,015 | - | DVU3208 | 0.87 | -1.5 | |
| 3,375,170 | + | -0.1 | |||
| 3,375,178 | + | -0.0 | |||
| 3,375,236 | - | -0.2 | |||
| 3,375,269 | + | -0.3 |
Or see this region's nucleotide sequence