Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2099

Experiment: Formate/Acetate-Sulfate (60/30-30 mM) with Casaminos 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/30-30 mM) with Casaminos 0.05%
2,187,278	+	cooS	DVU2098	0.52	+0.1
2,187,288	-	cooS	DVU2098	0.52	-0.3
2,187,306	-	cooS	DVU2098	0.53	-0.2
2,187,320	+	cooS	DVU2098	0.54	+0.1
2,187,477	-	cooS	DVU2098	0.62	-0.5
2,187,487	-	cooS	DVU2098	0.63	+0.0
2,187,546	+	cooS	DVU2098	0.66	+1.0
2,187,559	+	cooS	DVU2098	0.67	+0.0
2,187,683	+	cooS	DVU2098	0.73	+0.2
2,187,815	+	cooS	DVU2098	0.80	-0.2
2,187,861	-	cooS	DVU2098	0.83	-0.8
2,187,871	+	cooS	DVU2098	0.83	+0.0
2,187,871	+	cooS	DVU2098	0.83	-0.5
2,187,877	-	cooS	DVU2098	0.84	+0.1
2,187,984	-	cooS	DVU2098	0.89	-0.1
2,188,055	+				+0.0
2,188,060	+				+0.7
2,188,070	+				-1.3
2,188,116	+				-0.2
2,188,129	+				-0.4
2,188,259	+				-0.7
2,188,358	+				-0.7
2,188,585	+	cooC-2	DVU2099	0.36	+1.5
2,188,658	-	cooC-2	DVU2099	0.44	-0.1
2,188,831	+	cooC-2	DVU2099	0.64	+1.0
2,188,839	-	cooC-2	DVU2099	0.65	+0.9
2,188,839	-	cooC-2	DVU2099	0.65	+0.0
2,188,839	-	cooC-2	DVU2099	0.65	-0.7
2,189,125	-				+0.0
2,189,366	+		DVU2100	0.18	+0.0
2,189,418	-		DVU2100	0.30	-1.8
2,189,418	-		DVU2100	0.30	-0.2
2,189,564	-		DVU2100	0.65	+0.2
2,189,591	-		DVU2100	0.72	+1.2
2,189,616	+		DVU2100	0.78	+1.6
2,189,628	+		DVU2100	0.81	-0.1
2,189,663	-		DVU2100	0.89	+0.2
2,189,684	+				-0.6
2,189,692	-				-0.1
2,189,718	-				-0.4
2,189,757	-				-0.3
2,189,804	-				+0.8
2,190,027	-				+0.0
2,190,081	+				+0.4
2,190,135	-				-0.4