Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13360

Experiment: D,L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS13355 and BWI76_RS13360 overlap by 21 nucleotidesBWI76_RS13360 and BWI76_RS13365 are separated by 192 nucleotidesBWI76_RS13365 and BWI76_RS13370 are separated by 94 nucleotides BWI76_RS13355: BWI76_RS13355 - AraC family transcriptional regulator, at 2,785,578 to 2,786,444 _RS13355 BWI76_RS13360: BWI76_RS13360 - benzoate transporter, at 2,786,424 to 2,787,590 _RS13360 BWI76_RS13365: BWI76_RS13365 - GCN5-like N-acetyltransferase, at 2,787,783 to 2,788,208 _RS13365 BWI76_RS13370: BWI76_RS13370 - hypothetical protein, at 2,788,303 to 2,788,839 _RS13370 Position (kb) 2786 2787 2788Strain fitness (log2 ratio) -1 0 1at 2785.441 kb on - strandat 2785.441 kb on - strandat 2785.533 kb on - strandat 2785.544 kb on + strandat 2785.828 kb on + strand, within BWI76_RS13355at 2785.912 kb on - strand, within BWI76_RS13355at 2786.127 kb on - strand, within BWI76_RS13355at 2786.288 kb on - strand, within BWI76_RS13355at 2786.535 kb on + strandat 2787.286 kb on - strand, within BWI76_RS13360at 2787.391 kb on - strand, within BWI76_RS13360at 2787.440 kb on - strand, within BWI76_RS13360at 2787.445 kb on - strand, within BWI76_RS13360at 2787.583 kb on - strandat 2787.791 kb on + strandat 2788.548 kb on + strand, within BWI76_RS13370at 2788.548 kb on + strand, within BWI76_RS13370

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Lactate (C)
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2,785,441 - -0.6
2,785,441 - -0.3
2,785,533 - -0.4
2,785,544 + -0.7
2,785,828 + BWI76_RS13355 0.29 +0.2
2,785,912 - BWI76_RS13355 0.39 -0.3
2,786,127 - BWI76_RS13355 0.63 -0.4
2,786,288 - BWI76_RS13355 0.82 +0.1
2,786,535 + -0.0
2,787,286 - BWI76_RS13360 0.74 +0.5
2,787,391 - BWI76_RS13360 0.83 +1.0
2,787,440 - BWI76_RS13360 0.87 -0.0
2,787,445 - BWI76_RS13360 0.87 +0.8
2,787,583 - -0.6
2,787,791 + -1.0
2,788,548 + BWI76_RS13370 0.46 +0.3
2,788,548 + BWI76_RS13370 0.46 -0.3

Or see this region's nucleotide sequence