Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04695 and BWI76_RS04700 are separated by 2 nucleotides BWI76_RS04700 and BWI76_RS04705 are separated by 180 nucleotides
BWI76_RS04695: BWI76_RS04695 - acetolactate synthase 3 large subunit, at 979,896 to 981,620
_RS04695
BWI76_RS04700: BWI76_RS04700 - acetolactate synthase small subunit, at 981,623 to 982,114
_RS04700
BWI76_RS04705: BWI76_RS04705 - DNA-binding transcriptional regulator FruR, at 982,295 to 983,299
_RS04705
Position (kb) 981
982
983 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 980.693 kb on + strand at 980.695 kb on + strand, within BWI76_RS04695 at 980.773 kb on + strand, within BWI76_RS04695 at 980.801 kb on - strand, within BWI76_RS04695 at 980.887 kb on + strand at 980.981 kb on - strand, within BWI76_RS04695 at 981.034 kb on - strand, within BWI76_RS04695 at 981.087 kb on + strand, within BWI76_RS04695 at 981.107 kb on + strand, within BWI76_RS04695 at 981.115 kb on - strand, within BWI76_RS04695 at 981.115 kb on - strand, within BWI76_RS04695 at 981.115 kb on - strand, within BWI76_RS04695 at 981.274 kb on - strand, within BWI76_RS04695 at 981.303 kb on + strand, within BWI76_RS04695 at 981.351 kb on + strand, within BWI76_RS04695 at 981.364 kb on - strand, within BWI76_RS04695 at 981.388 kb on - strand, within BWI76_RS04695 at 981.388 kb on - strand, within BWI76_RS04695 at 981.542 kb on - strand at 981.551 kb on + strand at 981.551 kb on + strand at 981.551 kb on + strand at 981.559 kb on - strand at 981.593 kb on - strand at 981.617 kb on - strand at 981.665 kb on + strand at 981.801 kb on + strand, within BWI76_RS04700 at 981.884 kb on - strand, within BWI76_RS04700 at 982.063 kb on + strand, within BWI76_RS04700 at 982.068 kb on + strand at 982.222 kb on + strand at 982.222 kb on + strand at 982.340 kb on + strand at 982.631 kb on + strand, within BWI76_RS04705 at 982.647 kb on - strand, within BWI76_RS04705 at 982.684 kb on - strand, within BWI76_RS04705 at 982.730 kb on + strand, within BWI76_RS04705 at 982.730 kb on + strand, within BWI76_RS04705 at 982.757 kb on + strand, within BWI76_RS04705 at 982.789 kb on - strand, within BWI76_RS04705 at 983.020 kb on + strand, within BWI76_RS04705 at 983.028 kb on - strand, within BWI76_RS04705 at 983.066 kb on - strand, within BWI76_RS04705
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 980,693 + -0.5 980,695 + BWI76_RS04695 0.46 +0.0 980,773 + BWI76_RS04695 0.51 +0.5 980,801 - BWI76_RS04695 0.52 +0.3 980,887 + +1.5 980,981 - BWI76_RS04695 0.63 +0.2 981,034 - BWI76_RS04695 0.66 -2.0 981,087 + BWI76_RS04695 0.69 -0.5 981,107 + BWI76_RS04695 0.70 -0.6 981,115 - BWI76_RS04695 0.71 +0.4 981,115 - BWI76_RS04695 0.71 -0.3 981,115 - BWI76_RS04695 0.71 +0.3 981,274 - BWI76_RS04695 0.80 +0.0 981,303 + BWI76_RS04695 0.82 -0.7 981,351 + BWI76_RS04695 0.84 -0.1 981,364 - BWI76_RS04695 0.85 +0.1 981,388 - BWI76_RS04695 0.86 +0.3 981,388 - BWI76_RS04695 0.86 -0.2 981,542 - +0.1 981,551 + -0.7 981,551 + +0.5 981,551 + -0.3 981,559 - +0.0 981,593 - -0.4 981,617 - +0.5 981,665 + -0.4 981,801 + BWI76_RS04700 0.36 +1.4 981,884 - BWI76_RS04700 0.53 +0.6 982,063 + BWI76_RS04700 0.89 -0.1 982,068 + +0.5 982,222 + -0.2 982,222 + -0.5 982,340 + -2.0 982,631 + BWI76_RS04705 0.33 -3.8 982,647 - BWI76_RS04705 0.35 -3.7 982,684 - BWI76_RS04705 0.39 -1.0 982,730 + BWI76_RS04705 0.43 -5.7 982,730 + BWI76_RS04705 0.43 -0.5 982,757 + BWI76_RS04705 0.46 -2.7 982,789 - BWI76_RS04705 0.49 -1.5 983,020 + BWI76_RS04705 0.72 -3.3 983,028 - BWI76_RS04705 0.73 -4.4 983,066 - BWI76_RS04705 0.77 -0.7
Or see this region's nucleotide sequence