Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1929
Experiment: Thallium(I) acetate 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,420,380 | - | BT1928 | 0.33 | -1.5 | |
2,420,593 | - | BT1928 | 0.51 | -1.1 | |
2,420,771 | - | BT1928 | 0.65 | -0.4 | |
2,420,826 | + | BT1928 | 0.70 | -1.3 | |
2,420,899 | - | BT1928 | 0.75 | +2.0 | |
2,421,100 | + | -1.3 | |||
2,421,115 | + | -1.6 | |||
2,421,117 | + | +0.3 | |||
2,421,242 | + | -0.8 | |||
2,421,258 | + | -1.9 | |||
2,421,787 | + | BT1929 | 0.47 | +1.4 | |
2,421,812 | + | BT1929 | 0.49 | -0.8 | |
2,421,813 | - | BT1929 | 0.49 | -0.2 | |
2,421,813 | - | BT1929 | 0.49 | +0.4 | |
2,421,874 | - | BT1929 | 0.54 | -0.3 | |
2,422,040 | - | BT1929 | 0.68 | -0.9 | |
2,422,120 | + | BT1929 | 0.74 | -0.2 | |
2,422,180 | + | BT1929 | 0.79 | +0.3 | |
2,422,180 | + | BT1929 | 0.79 | -1.3 | |
2,422,188 | - | BT1929 | 0.80 | +1.9 | |
2,422,339 | + | -0.6 | |||
2,422,433 | + | +0.0 | |||
2,422,454 | + | -1.9 | |||
2,422,480 | - | +0.0 | |||
2,422,490 | - | -0.2 | |||
2,422,494 | + | -1.8 | |||
2,422,494 | + | -1.5 | |||
2,422,495 | - | -0.4 | |||
2,422,582 | - | BT1930 | 0.29 | +0.9 | |
2,422,778 | - | +3.2 | |||
2,422,896 | + | -1.6 | |||
2,423,040 | + | -1.6 | |||
2,423,126 | - | -2.7 | |||
2,423,159 | - | +0.4 | |||
2,423,403 | - | -0.2 | |||
2,423,423 | - | -0.7 |
Or see this region's nucleotide sequence