Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4010

Experiment: Gjerstad humics 0.5 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gjerstad humics 0.5 M
4,679,831	+		Pf6N2E2_4009	0.68	-1.6
4,679,831	+		Pf6N2E2_4009	0.68	+0.8
4,679,831	+		Pf6N2E2_4009	0.68	+0.1
4,679,889	-		Pf6N2E2_4009	0.71	+1.1
4,679,889	-		Pf6N2E2_4009	0.71	+0.2
4,679,889	-		Pf6N2E2_4009	0.71	+1.1
4,680,012	+		Pf6N2E2_4009	0.77	+1.8
4,680,012	+		Pf6N2E2_4009	0.77	-0.7
4,680,013	-		Pf6N2E2_4009	0.77	+1.0
4,680,013	-		Pf6N2E2_4009	0.77	+1.1
4,680,013	-		Pf6N2E2_4009	0.77	+0.6
4,680,026	+		Pf6N2E2_4009	0.78	+0.2
4,680,026	+		Pf6N2E2_4009	0.78	-0.6
4,680,361	+				+0.0
4,680,361	+				+0.0
4,680,404	+				-0.7
4,680,404	+				+0.3
4,680,405	-				+1.0
4,680,405	-				-0.4
4,680,405	-				+0.1
4,680,405	-				-0.3
4,680,405	-				+0.4
4,680,437	+				+1.3
4,680,437	+				+0.1
4,680,438	-				+0.6
4,680,438	-				+0.6
4,680,438	-				+0.9
4,680,483	-				-0.7
4,680,484	+				+0.5
4,680,484	+				-0.5
4,680,484	+				+0.8
4,680,484	+				-0.8
4,680,484	+				+0.3
4,680,484	+				+0.0
4,680,485	-				+0.7
4,680,485	-				-1.3
4,680,485	-				-0.3
4,680,485	-				-0.0
4,680,510	+				+1.1
4,680,510	+				+0.1
4,680,510	+				-0.0
4,680,510	+				+0.7
4,680,510	+				+1.2
4,680,511	-				-0.4
4,680,532	+				+0.2
4,680,532	+				+1.3
4,680,532	+				+0.7
4,680,532	+				+0.6
4,680,533	-				+0.2
4,680,533	-				-0.0
4,680,533	-				+0.0
4,680,551	-				-0.9
4,680,568	+				+1.0
4,680,568	+				+0.1
4,680,587	-				+0.7
4,680,593	+				+0.7
4,680,593	+				+0.7
4,680,593	+				+1.1
4,680,593	+				-0.3
4,680,593	+				-0.5
4,680,594	-				-1.1
4,680,594	-				+0.4
4,680,594	-				+0.4
4,680,594	-				-0.6
4,680,594	-				+0.1
4,680,594	-				+0.7
4,680,594	-				-0.8
4,680,594	-				+0.2
4,680,594	-				-0.5
4,680,600	+				-0.2
4,680,600	+				-1.6
4,680,601	-				-1.3
4,680,687	+				+0.3
4,680,687	+				-0.8
4,680,688	-				-0.1
4,680,688	-				+0.6
4,680,688	-				-0.4
4,680,901	-		Pf6N2E2_4010	0.26	-0.4
4,680,940	-		Pf6N2E2_4010	0.29	-0.6
4,680,981	+		Pf6N2E2_4010	0.33	-0.4
4,680,982	-		Pf6N2E2_4010	0.33	-0.4
4,680,982	-		Pf6N2E2_4010	0.33	-0.5
4,680,982	-		Pf6N2E2_4010	0.33	-1.0
4,681,059	-		Pf6N2E2_4010	0.39	+0.1
4,681,059	-		Pf6N2E2_4010	0.39	-0.8
4,681,059	-		Pf6N2E2_4010	0.39	-0.5
4,681,059	-		Pf6N2E2_4010	0.39	+0.1
4,681,228	-		Pf6N2E2_4010	0.54	-1.8
4,681,606	-		Pf6N2E2_4010	0.85	-0.4
4,681,752	+				+0.2
4,681,753	-				-0.5
4,681,936	-				-0.3
4,681,936	-				-0.3
4,681,986	+				-0.6
4,681,987	-				-0.2
4,681,987	-				-0.0
4,682,044	+				+0.9
4,682,044	+				+0.5
4,682,091	+				+0.1
4,682,091	+				+1.0
4,682,091	+				-0.3
4,682,091	+				-0.7
4,682,099	+				-0.4
4,682,100	-				-0.2
4,682,106	+				+0.3
4,682,106	+				-0.1
4,682,107	-				-0.5
4,682,264	+		Pf6N2E2_4011	0.19	+0.1
4,682,264	+		Pf6N2E2_4011	0.19	+0.8
4,682,264	+		Pf6N2E2_4011	0.19	-0.1
4,682,264	+		Pf6N2E2_4011	0.19	-0.1
4,682,264	+		Pf6N2E2_4011	0.19	-1.5
4,682,264	+		Pf6N2E2_4011	0.19	+0.6
4,682,264	+		Pf6N2E2_4011	0.19	-0.2
4,682,265	-		Pf6N2E2_4011	0.19	+0.2
4,682,265	-		Pf6N2E2_4011	0.19	+0.6
4,682,265	-		Pf6N2E2_4011	0.19	-0.5
4,682,265	-		Pf6N2E2_4011	0.19	-0.6
4,682,265	-		Pf6N2E2_4011	0.19	-2.0
4,682,265	-		Pf6N2E2_4011	0.19	+1.1
4,682,265	-		Pf6N2E2_4011	0.19	-0.4
4,682,265	-		Pf6N2E2_4011	0.19	-0.1
4,682,265	-		Pf6N2E2_4011	0.19	-0.4
4,682,265	-		Pf6N2E2_4011	0.19	+0.1
4,682,349	-		Pf6N2E2_4011	0.28	+0.4
4,682,349	-		Pf6N2E2_4011	0.28	-0.4
4,682,349	-		Pf6N2E2_4011	0.28	-0.7
4,682,377	+		Pf6N2E2_4011	0.31	+0.3
4,682,377	+		Pf6N2E2_4011	0.31	-0.3
4,682,423	+		Pf6N2E2_4011	0.35	+0.3
4,682,658	+		Pf6N2E2_4011	0.59	+0.6
4,682,658	+		Pf6N2E2_4011	0.59	+0.0
4,682,659	-		Pf6N2E2_4011	0.59	-0.2
4,682,659	-		Pf6N2E2_4011	0.59	-0.6
4,682,659	-		Pf6N2E2_4011	0.59	+0.2
4,682,665	+		Pf6N2E2_4011	0.60	+0.1
4,682,665	+		Pf6N2E2_4011	0.60	+0.2
4,682,665	+		Pf6N2E2_4011	0.60	+0.5
4,682,665	+		Pf6N2E2_4011	0.60	+0.5
4,682,666	-		Pf6N2E2_4011	0.60	+0.2
4,682,666	-		Pf6N2E2_4011	0.60	-2.1
4,682,666	-		Pf6N2E2_4011	0.60	+0.3
4,682,666	-		Pf6N2E2_4011	0.60	+0.3
4,682,666	-		Pf6N2E2_4011	0.60	+2.3
4,682,666	-		Pf6N2E2_4011	0.60	+1.3
4,682,723	+		Pf6N2E2_4011	0.65	+0.5
4,682,723	+		Pf6N2E2_4011	0.65	+0.2
4,682,723	+		Pf6N2E2_4011	0.65	-0.3
4,682,723	+		Pf6N2E2_4011	0.65	+0.2
4,682,723	+		Pf6N2E2_4011	0.65	+0.2
4,682,723	+		Pf6N2E2_4011	0.65	-0.2
4,682,723	+		Pf6N2E2_4011	0.65	+0.2
4,682,724	-		Pf6N2E2_4011	0.66	-0.2
4,682,724	-		Pf6N2E2_4011	0.66	+0.2
4,682,724	-		Pf6N2E2_4011	0.66	-0.1
4,682,724	-		Pf6N2E2_4011	0.66	+0.2
4,682,724	-		Pf6N2E2_4011	0.66	-0.1
4,682,724	-		Pf6N2E2_4011	0.66	-0.1
4,682,724	-		Pf6N2E2_4011	0.66	-0.4
4,682,724	-		Pf6N2E2_4011	0.66	-0.5