Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3423

Experiment: Gjerstad humics 0.5 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gjerstad humics 0.5 M
3,979,194	+				+0.7
3,979,194	+				-0.4
3,979,194	+				-0.2
3,979,195	-				+0.9
3,979,195	-				-0.2
3,979,195	-				-0.6
3,979,206	+				-1.8
3,979,206	+				-0.0
3,979,206	+				-0.3
3,979,206	+				+0.4
3,979,206	-				-0.6
3,979,207	-				-0.1
3,979,211	+				-0.1
3,979,211	+				-0.5
3,979,212	-				+0.4
3,979,221	+				-1.0
3,979,234	-				+0.4
3,979,240	+				+0.3
3,979,241	-				-0.7
3,979,340	-				-0.7
3,979,406	-		Pf6N2E2_3422	0.15	+0.5
3,979,406	-		Pf6N2E2_3422	0.15	-0.7
3,979,494	+		Pf6N2E2_3422	0.25	+0.1
3,979,538	+		Pf6N2E2_3422	0.30	+0.1
3,979,538	+		Pf6N2E2_3422	0.30	-0.1
3,979,618	+		Pf6N2E2_3422	0.39	-2.6
3,979,619	-		Pf6N2E2_3422	0.39	+1.0
3,979,666	-		Pf6N2E2_3422	0.44	+0.3
3,979,678	-		Pf6N2E2_3422	0.46	+0.6
3,979,678	-		Pf6N2E2_3422	0.46	+0.6
3,979,786	+		Pf6N2E2_3422	0.58	-0.5
3,979,787	-		Pf6N2E2_3422	0.58	+0.6
3,979,813	+		Pf6N2E2_3422	0.61	+0.6
3,979,814	-		Pf6N2E2_3422	0.61	+0.2
3,979,814	-		Pf6N2E2_3422	0.61	+0.2
3,979,814	-		Pf6N2E2_3422	0.61	-0.2
3,979,814	-		Pf6N2E2_3422	0.61	-1.6
3,979,888	+		Pf6N2E2_3422	0.69	+2.0
3,979,888	+		Pf6N2E2_3422	0.69	-0.9
3,979,888	+		Pf6N2E2_3422	0.69	-0.2
3,979,889	-		Pf6N2E2_3422	0.69	+0.2
3,979,924	-		Pf6N2E2_3422	0.73	-0.3
3,979,989	+		Pf6N2E2_3422	0.81	+0.1
3,979,990	-		Pf6N2E2_3422	0.81	-0.3
3,980,057	+		Pf6N2E2_3422	0.88	-0.4
3,980,057	+		Pf6N2E2_3422	0.88	+0.4
3,980,058	-		Pf6N2E2_3422	0.88	-2.0
3,980,058	-		Pf6N2E2_3422	0.88	-1.5
3,980,058	-		Pf6N2E2_3422	0.88	+0.3
3,980,116	+				-0.4
3,980,117	-				-0.1
3,980,159	-				-1.2
3,980,189	+				-1.6
3,980,190	-				-0.0
3,980,205	-				-0.5
3,980,210	+				+0.1
3,980,210	+				+2.0
3,980,211	-				-0.0
3,980,211	-				+0.3
3,980,339	-		Pf6N2E2_3423	0.18	-0.0
3,980,368	+		Pf6N2E2_3423	0.22	+1.0
3,980,368	+		Pf6N2E2_3423	0.22	+0.6
3,980,369	-		Pf6N2E2_3423	0.22	+0.6
3,980,369	-		Pf6N2E2_3423	0.22	+0.9
3,980,374	+		Pf6N2E2_3423	0.22	+0.8
3,980,374	+		Pf6N2E2_3423	0.22	-0.3
3,980,374	+		Pf6N2E2_3423	0.22	+0.0
3,980,375	-		Pf6N2E2_3423	0.22	-1.2
3,980,375	-		Pf6N2E2_3423	0.22	-0.2
3,980,375	-		Pf6N2E2_3423	0.22	+0.4
3,980,422	+		Pf6N2E2_3423	0.27	-1.5
3,980,423	-		Pf6N2E2_3423	0.27	-0.0
3,980,451	+		Pf6N2E2_3423	0.30	-0.6
3,980,790	-		Pf6N2E2_3423	0.66	+0.9
3,980,790	-		Pf6N2E2_3423	0.66	+0.2
3,980,790	-		Pf6N2E2_3423	0.66	+0.4
3,980,844	-		Pf6N2E2_3423	0.72	-2.1
3,980,978	+		Pf6N2E2_3423	0.86	+0.5
3,980,992	-		Pf6N2E2_3423	0.87	+0.5
3,981,001	+		Pf6N2E2_3423	0.88	+0.3
3,981,001	+		Pf6N2E2_3423	0.88	+0.4
3,981,001	+		Pf6N2E2_3423	0.88	+1.1
3,981,001	+		Pf6N2E2_3423	0.88	+0.1
3,981,002	-		Pf6N2E2_3423	0.88	+1.5
3,981,002	-		Pf6N2E2_3423	0.88	-0.3
3,981,002	-		Pf6N2E2_3423	0.88	+1.9
3,981,002	-		Pf6N2E2_3423	0.88	+0.4
3,981,441	+		Pf6N2E2_3424	0.39	-1.1
3,981,441	+		Pf6N2E2_3424	0.39	-0.1
3,981,442	-		Pf6N2E2_3424	0.39	-0.8
3,981,442	-		Pf6N2E2_3424	0.39	-0.0
3,981,486	-		Pf6N2E2_3424	0.44	-0.1
3,981,486	-		Pf6N2E2_3424	0.44	+0.8
3,981,488	+		Pf6N2E2_3424	0.44	+1.0
3,981,488	+		Pf6N2E2_3424	0.44	-2.4
3,981,488	+		Pf6N2E2_3424	0.44	-0.4
3,981,489	-		Pf6N2E2_3424	0.44	-0.4
3,981,561	+		Pf6N2E2_3424	0.53	-0.4
3,981,561	+		Pf6N2E2_3424	0.53	+0.3
3,981,561	+		Pf6N2E2_3424	0.53	+0.3
3,981,562	-		Pf6N2E2_3424	0.53	-0.6
3,981,562	-		Pf6N2E2_3424	0.53	-0.0
3,981,564	-		Pf6N2E2_3424	0.53	+0.1
3,981,564	-		Pf6N2E2_3424	0.53	+0.4
3,981,594	+		Pf6N2E2_3424	0.57	+0.1
3,981,595	-		Pf6N2E2_3424	0.57	-0.2
3,981,757	+		Pf6N2E2_3424	0.76	-1.0
3,981,757	+		Pf6N2E2_3424	0.76	-1.5