Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08255

Experiment: Growth at 34C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Growth at 34C
1,846,690	+		PFLU_RS08250	0.46	+0.5
1,846,690	+		PFLU_RS08250	0.46	+1.2
1,846,691	-		PFLU_RS08250	0.46	-0.3
1,846,712	+		PFLU_RS08250	0.48	+0.5
1,846,713	-		PFLU_RS08250	0.49	-1.5
1,846,823	+		PFLU_RS08250	0.59	-0.5
1,846,824	-		PFLU_RS08250	0.59	+1.7
1,846,824	-		PFLU_RS08250	0.59	+0.1
1,846,824	-		PFLU_RS08250	0.59	+0.6
1,846,927	+		PFLU_RS08250	0.69	-0.5
1,846,927	+		PFLU_RS08250	0.69	-2.9
1,846,927	+		PFLU_RS08250	0.69	-0.1
1,846,928	-		PFLU_RS08250	0.69	-1.5
1,846,928	-		PFLU_RS08250	0.69	+0.3
1,847,050	+		PFLU_RS08250	0.81	-0.2
1,847,050	+		PFLU_RS08250	0.81	-0.8
1,847,050	+		PFLU_RS08250	0.81	-1.6
1,847,050	+		PFLU_RS08250	0.81	+0.5
1,847,051	-		PFLU_RS08250	0.81	+0.3
1,847,101	+		PFLU_RS08250	0.86	+0.7
1,847,101	+		PFLU_RS08250	0.86	+0.5
1,847,101	+		PFLU_RS08250	0.86	-1.3
1,847,102	-		PFLU_RS08250	0.86	-0.5
1,847,102	-		PFLU_RS08250	0.86	-1.0
1,847,141	+		PFLU_RS08250	0.90	+0.3
1,847,155	+				+1.4
1,847,156	-				+1.1
1,847,240	+				+1.0
1,847,240	+				+0.1
1,847,240	+				+1.5
1,847,241	-				+0.2
1,847,241	-				+2.1
1,847,241	-				+1.4
1,847,241	-				-0.9
1,847,241	-				-1.9
1,847,354	+				+3.1
1,847,355	-				-0.0
1,847,364	+				-1.1
1,847,365	-				-0.6
1,847,375	+				+1.0
1,847,376	-				+0.2
1,847,386	+				+1.1
1,847,387	-				-2.3
1,847,387	-				+0.7
1,847,388	+				+0.3
1,847,388	+				-2.2
1,847,388	+				+0.2
1,847,388	+				+0.5
1,847,388	+				+1.5
1,847,388	+				-0.5
1,847,388	+				+0.1
1,847,388	+				-2.0
1,847,388	+				-0.8
1,847,388	+				+0.5
1,847,388	+				+0.8
1,847,388	+				+0.6
1,847,388	+				+1.8
1,847,388	+				-2.7
1,847,388	+				+0.5
1,847,389	-				+0.3
1,847,389	-				+0.1
1,847,389	-				-1.2
1,847,389	-				+0.7
1,847,389	-				-0.0
1,847,389	-				-1.6
1,847,389	-				+0.7
1,847,389	-				+1.5
1,847,389	-				+0.9
1,847,389	-				+0.2
1,847,389	-				+1.2
1,847,389	-				-0.0
1,847,389	-				-2.5
1,847,389	-				-1.6
1,847,389	-				+0.5
1,847,389	-				+1.4
1,847,389	-				-0.7
1,847,392	+				-1.5
1,847,392	+				-1.9
1,847,392	+				-1.3
1,847,392	+				-1.4
1,847,392	+				-0.0
1,847,392	+				+0.4
1,847,392	+				-0.4
1,847,392	+				-0.0
1,847,392	+				+0.7
1,847,392	+				-2.2
1,847,392	+				-0.6
1,847,392	+				-0.0
1,847,392	+				+1.2
1,847,392	+				-0.5
1,847,392	+				-0.5
1,847,392	+				-1.9
1,847,392	+				+0.5
1,847,392	+				+1.0
1,847,392	+				+1.2
1,847,392	+				+0.4
1,847,392	+				-1.7
1,847,392	+				-0.5
1,847,393	-				+1.0
1,847,393	-				+1.1
1,847,393	-				+0.4
1,847,393	-				+2.1
1,847,393	-				+0.9
1,847,393	-				+1.0
1,847,393	-				-1.1
1,847,393	-				+0.5
1,847,393	-				+0.7
1,847,393	-				+0.5
1,847,393	-				+2.1
1,847,393	-				-1.9
1,847,393	-				+0.5
1,847,393	-				-0.2
1,847,393	-				+1.5
1,847,393	-				+1.5
1,847,393	-				+0.3
1,847,393	-				-1.5
1,847,393	-				-1.6
1,847,393	-				+0.4
1,847,393	-				+0.2
1,847,393	-				+1.5
1,847,393	-				+1.2
1,847,393	-				-1.3
1,847,393	-				-0.8
1,847,393	-				+1.0
1,847,393	-				-0.8
1,847,396	-				-1.5
1,847,431	+				-0.2
1,847,431	+				-0.7
1,847,431	+				+0.4
1,847,431	+				-1.3
1,847,431	+				-1.3
1,847,432	-				-2.5
1,847,432	-				+1.0
1,847,432	-				-1.2
1,847,432	-				+0.6
1,847,432	-				-0.0
1,847,432	-				-0.6
1,847,432	-				+1.5
1,847,432	-				+1.5
1,847,432	-				-1.5
1,847,432	-				+0.7
1,847,432	-				-0.1
1,847,432	-				-1.6
1,847,432	-				+0.6
1,847,432	-				+1.3
1,847,442	+				-0.1
1,847,442	+				-2.9
1,847,443	-				+0.5
1,847,443	-				-1.2
1,847,443	-				-0.2
1,847,443	-				+2.0
1,847,443	-				-0.0
1,847,449	+				+1.9
1,847,449	+				+0.1
1,847,449	+				-0.5
1,847,449	+				+1.8
1,847,449	+				+0.5
1,847,450	-				+0.1
1,847,450	-				-0.6
1,847,450	-				-0.2
1,847,450	-				+0.1
1,847,450	-				-0.9
1,847,466	+				-0.7
1,847,637	+		PFLU_RS08255	0.55	-0.0
1,847,733	+		PFLU_RS08255	0.89	+0.7
1,847,733	+		PFLU_RS08255	0.89	+0.4
1,847,733	+		PFLU_RS08255	0.89	-1.0
1,847,733	+		PFLU_RS08255	0.89	-0.4
1,847,733	+		PFLU_RS08255	0.89	+0.1
1,847,733	+		PFLU_RS08255	0.89	-0.9
1,847,734	-		PFLU_RS08255	0.90	-0.5
1,847,734	-		PFLU_RS08255	0.90	-0.0
1,847,734	-		PFLU_RS08255	0.90	+0.4
1,847,734	-		PFLU_RS08255	0.90	+0.5
1,847,734	-		PFLU_RS08255	0.90	+2.1
1,847,734	-		PFLU_RS08255	0.90	+1.2
1,847,734	-		PFLU_RS08255	0.90	+0.5
1,847,734	-		PFLU_RS08255	0.90	-0.1
1,847,734	-		PFLU_RS08255	0.90	-0.5
1,847,735	+				+0.3
1,847,774	+				+0.3
1,847,775	-				-0.8
1,847,775	-				-0.2
1,847,792	-				+0.4
1,847,792	-				+1.3
1,847,826	+				+0.9
1,847,826	+				-1.3
1,847,826	+				-1.9
1,847,827	-				-2.3
1,847,827	-				-0.6
1,847,827	-				+1.5
1,847,827	-				-1.5
1,847,827	-				+0.4
1,847,827	-				-0.9
1,847,853	+				-0.8
1,847,853	+				+0.1
1,847,853	+				-1.0
1,847,853	+				+1.5
1,847,853	+				-2.5
1,847,853	+				-0.5
1,847,853	+				+0.5
1,847,854	-				-0.6
1,847,854	-				+1.0
1,847,854	-				-0.4
1,847,854	-				+0.4
1,847,854	-				-1.3
1,847,854	-				+0.5
1,847,860	-				-0.4
1,848,001	+		PFLU_RS08260	0.26	-1.8
1,848,002	-		PFLU_RS08260	0.26	+0.2
1,848,053	+		PFLU_RS08260	0.33	-0.3
1,848,053	+		PFLU_RS08260	0.33	-1.6
1,848,054	-		PFLU_RS08260	0.33	-1.5
1,848,054	-		PFLU_RS08260	0.33	-1.3
1,848,054	-		PFLU_RS08260	0.33	-2.5
1,848,057	+		PFLU_RS08260	0.33	-0.9
1,848,057	+		PFLU_RS08260	0.33	+0.2
1,848,058	-		PFLU_RS08260	0.33	+0.1
1,848,058	-		PFLU_RS08260	0.33	-1.2
1,848,578	+				+0.1
1,848,578	+				-2.0
1,848,579	-				-0.0
1,848,579	-				-0.1
1,848,590	-				+1.0
1,848,598	+				-0.9
1,848,618	+				+2.3
1,848,618	+				-0.8
1,848,619	-				-0.5
1,848,619	-				-0.2
1,848,664	+				-1.1
1,848,664	+				-1.4
1,848,664	+				+0.2