Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07020

Experiment: L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS07015 and BWI76_RS07020 are separated by 175 nucleotidesBWI76_RS07020 and BWI76_RS07025 are separated by 18 nucleotides BWI76_RS07015: BWI76_RS07015 - cyclic amidohydrolase, at 1,474,174 to 1,475,535 _RS07015 BWI76_RS07020: BWI76_RS07020 - putative purine permease YbbY, at 1,475,711 to 1,477,021 _RS07020 BWI76_RS07025: BWI76_RS07025 - glycerate kinase II, at 1,477,040 to 1,478,185 _RS07025 Position (kb) 1475 1476 1477 1478Strain fitness (log2 ratio) -2 -1 0 1 2at 1474.896 kb on - strand, within BWI76_RS07015at 1474.939 kb on + strand, within BWI76_RS07015at 1474.987 kb on + strand, within BWI76_RS07015at 1474.990 kb on - strand, within BWI76_RS07015at 1475.103 kb on - strand, within BWI76_RS07015at 1475.121 kb on + strand, within BWI76_RS07015at 1475.163 kb on + strand, within BWI76_RS07015at 1475.185 kb on + strand, within BWI76_RS07015at 1475.208 kb on - strand, within BWI76_RS07015at 1475.208 kb on - strand, within BWI76_RS07015at 1475.322 kb on - strand, within BWI76_RS07015at 1475.610 kb on + strandat 1475.654 kb on - strandat 1475.844 kb on + strand, within BWI76_RS07020at 1475.899 kb on + strand, within BWI76_RS07020at 1476.128 kb on - strand, within BWI76_RS07020at 1476.141 kb on - strand, within BWI76_RS07020at 1476.233 kb on - strand, within BWI76_RS07020at 1476.313 kb on - strand, within BWI76_RS07020at 1476.315 kb on - strand, within BWI76_RS07020at 1476.422 kb on + strand, within BWI76_RS07020at 1476.425 kb on - strand, within BWI76_RS07020at 1476.430 kb on - strandat 1476.435 kb on + strand, within BWI76_RS07020at 1476.443 kb on - strand, within BWI76_RS07020at 1476.443 kb on - strand, within BWI76_RS07020at 1476.443 kb on - strand, within BWI76_RS07020at 1476.457 kb on - strand, within BWI76_RS07020at 1476.516 kb on + strand, within BWI76_RS07020at 1476.518 kb on + strand, within BWI76_RS07020at 1476.555 kb on + strand, within BWI76_RS07020at 1476.555 kb on + strand, within BWI76_RS07020at 1476.563 kb on - strand, within BWI76_RS07020at 1476.563 kb on - strand, within BWI76_RS07020at 1476.563 kb on - strand, within BWI76_RS07020at 1476.572 kb on - strand, within BWI76_RS07020at 1476.587 kb on - strand, within BWI76_RS07020at 1476.605 kb on + strand, within BWI76_RS07020at 1476.609 kb on + strand, within BWI76_RS07020at 1476.647 kb on - strand, within BWI76_RS07020at 1476.673 kb on - strand, within BWI76_RS07020at 1476.702 kb on + strand, within BWI76_RS07020at 1476.712 kb on + strand, within BWI76_RS07020at 1476.712 kb on + strand, within BWI76_RS07020at 1476.720 kb on - strand, within BWI76_RS07020at 1476.720 kb on - strand, within BWI76_RS07020at 1476.730 kb on + strand, within BWI76_RS07020at 1476.773 kb on - strand, within BWI76_RS07020at 1476.773 kb on - strand, within BWI76_RS07020at 1476.775 kb on - strand, within BWI76_RS07020at 1476.775 kb on - strand, within BWI76_RS07020at 1476.783 kb on - strand, within BWI76_RS07020at 1476.910 kb on - strandat 1476.915 kb on + strandat 1476.915 kb on + strandat 1476.923 kb on - strandat 1476.938 kb on + strandat 1476.938 kb on + strandat 1476.938 kb on + strandat 1476.938 kb on + strandat 1476.938 kb on + strandat 1476.938 kb on + strandat 1476.938 kb on + strandat 1476.938 kb on + strandat 1476.946 kb on - strandat 1476.946 kb on - strandat 1476.946 kb on - strandat 1476.946 kb on - strandat 1476.970 kb on + strandat 1476.978 kb on - strandat 1477.008 kb on + strandat 1477.008 kb on + strandat 1477.014 kb on + strandat 1477.014 kb on + strandat 1477.032 kb on + strandat 1477.063 kb on - strandat 1477.063 kb on - strandat 1477.065 kb on + strandat 1477.065 kb on + strandat 1477.065 kb on + strandat 1477.065 kb on + strandat 1477.065 kb on + strandat 1477.065 kb on + strandat 1477.065 kb on + strandat 1477.065 kb on + strandat 1477.073 kb on - strandat 1477.073 kb on - strandat 1477.073 kb on - strandat 1477.073 kb on - strandat 1477.073 kb on - strandat 1477.078 kb on + strandat 1477.078 kb on + strandat 1477.091 kb on - strandat 1477.103 kb on - strandat 1477.138 kb on + strandat 1477.142 kb on + strandat 1477.146 kb on - strandat 1477.146 kb on - strandat 1477.146 kb on - strandat 1477.182 kb on + strand, within BWI76_RS07025at 1477.189 kb on + strand, within BWI76_RS07025at 1477.231 kb on + strand, within BWI76_RS07025at 1477.348 kb on + strand, within BWI76_RS07025at 1477.350 kb on + strand, within BWI76_RS07025at 1477.356 kb on - strand, within BWI76_RS07025at 1477.497 kb on + strand, within BWI76_RS07025at 1477.549 kb on - strand, within BWI76_RS07025at 1477.723 kb on - strand, within BWI76_RS07025

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Lactate (C)
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1,474,896 - BWI76_RS07015 0.53 +0.0
1,474,939 + BWI76_RS07015 0.56 +0.5
1,474,987 + BWI76_RS07015 0.60 +0.1
1,474,990 - BWI76_RS07015 0.60 +0.0
1,475,103 - BWI76_RS07015 0.68 +0.1
1,475,121 + BWI76_RS07015 0.70 -0.4
1,475,163 + BWI76_RS07015 0.73 -2.6
1,475,185 + BWI76_RS07015 0.74 -0.1
1,475,208 - BWI76_RS07015 0.76 -0.5
1,475,208 - BWI76_RS07015 0.76 +0.7
1,475,322 - BWI76_RS07015 0.84 -0.6
1,475,610 + +0.2
1,475,654 - +0.1
1,475,844 + BWI76_RS07020 0.10 +0.9
1,475,899 + BWI76_RS07020 0.14 +0.1
1,476,128 - BWI76_RS07020 0.32 +0.7
1,476,141 - BWI76_RS07020 0.33 -0.3
1,476,233 - BWI76_RS07020 0.40 +2.2
1,476,313 - BWI76_RS07020 0.46 -0.3
1,476,315 - BWI76_RS07020 0.46 +0.6
1,476,422 + BWI76_RS07020 0.54 +0.3
1,476,425 - BWI76_RS07020 0.54 +0.4
1,476,430 - +1.7
1,476,435 + BWI76_RS07020 0.55 -1.8
1,476,443 - BWI76_RS07020 0.56 -0.0
1,476,443 - BWI76_RS07020 0.56 -0.6
1,476,443 - BWI76_RS07020 0.56 +0.6
1,476,457 - BWI76_RS07020 0.57 -0.1
1,476,516 + BWI76_RS07020 0.61 -0.2
1,476,518 + BWI76_RS07020 0.62 +0.3
1,476,555 + BWI76_RS07020 0.64 +0.3
1,476,555 + BWI76_RS07020 0.64 -0.0
1,476,563 - BWI76_RS07020 0.65 +0.9
1,476,563 - BWI76_RS07020 0.65 +0.4
1,476,563 - BWI76_RS07020 0.65 +0.4
1,476,572 - BWI76_RS07020 0.66 -0.3
1,476,587 - BWI76_RS07020 0.67 -1.5
1,476,605 + BWI76_RS07020 0.68 -2.5
1,476,609 + BWI76_RS07020 0.68 +0.1
1,476,647 - BWI76_RS07020 0.71 +1.1
1,476,673 - BWI76_RS07020 0.73 -1.9
1,476,702 + BWI76_RS07020 0.76 -0.0
1,476,712 + BWI76_RS07020 0.76 -0.2
1,476,712 + BWI76_RS07020 0.76 +0.8
1,476,720 - BWI76_RS07020 0.77 +0.5
1,476,720 - BWI76_RS07020 0.77 +0.3
1,476,730 + BWI76_RS07020 0.78 -0.1
1,476,773 - BWI76_RS07020 0.81 -0.0
1,476,773 - BWI76_RS07020 0.81 +0.4
1,476,775 - BWI76_RS07020 0.81 -2.1
1,476,775 - BWI76_RS07020 0.81 +0.3
1,476,783 - BWI76_RS07020 0.82 +0.4
1,476,910 - -1.0
1,476,915 + -0.4
1,476,915 + -0.4
1,476,923 - -0.0
1,476,938 + -0.3
1,476,938 + -1.5
1,476,938 + -0.1
1,476,938 + -0.2
1,476,938 + +0.3
1,476,938 + -0.5
1,476,938 + +0.4
1,476,938 + +0.3
1,476,946 - +0.7
1,476,946 - -1.4
1,476,946 - -0.3
1,476,946 - -0.8
1,476,970 + -0.5
1,476,978 - +0.7
1,477,008 + -0.1
1,477,008 + +1.2
1,477,014 + -0.4
1,477,014 + +0.2
1,477,032 + -0.6
1,477,063 - +0.0
1,477,063 - +0.3
1,477,065 + -0.6
1,477,065 + -1.0
1,477,065 + -0.1
1,477,065 + +1.3
1,477,065 + -0.3
1,477,065 + -0.7
1,477,065 + -0.2
1,477,065 + +0.3
1,477,073 - -1.3
1,477,073 - +1.7
1,477,073 - +0.7
1,477,073 - +0.2
1,477,073 - -0.2
1,477,078 + +0.2
1,477,078 + +1.7
1,477,091 - +0.2
1,477,103 - -0.2
1,477,138 + -0.8
1,477,142 + -0.5
1,477,146 - -0.1
1,477,146 - -0.1
1,477,146 - +0.5
1,477,182 + BWI76_RS07025 0.12 -0.3
1,477,189 + BWI76_RS07025 0.13 +0.4
1,477,231 + BWI76_RS07025 0.17 -0.0
1,477,348 + BWI76_RS07025 0.27 +1.4
1,477,350 + BWI76_RS07025 0.27 +0.2
1,477,356 - BWI76_RS07025 0.28 +0.7
1,477,497 + BWI76_RS07025 0.40 -0.1
1,477,549 - BWI76_RS07025 0.44 -1.2
1,477,723 - BWI76_RS07025 0.60 -0.7

Or see this region's nucleotide sequence