Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03510 and BWI76_RS03515 overlap by 4 nucleotides BWI76_RS03515 and BWI76_RS03520 are separated by 531 nucleotides
BWI76_RS03510: BWI76_RS03510 - multidrug ABC transporter ATP-binding protein, at 725,456 to 728,185
_RS03510
BWI76_RS03515: BWI76_RS03515 - hypothetical protein, at 728,182 to 729,249
_RS03515
BWI76_RS03520: BWI76_RS03520 - diguanylate cyclase, at 729,781 to 731,178
_RS03520
Position (kb) 728
729
730 Strain fitness (log2 ratio) -2
-1
0
1
2 at 727.281 kb on + strand, within BWI76_RS03510 at 727.485 kb on - strand, within BWI76_RS03510 at 727.494 kb on - strand, within BWI76_RS03510 at 727.809 kb on - strand, within BWI76_RS03510 at 727.859 kb on + strand, within BWI76_RS03510 at 727.933 kb on - strand at 727.957 kb on + strand at 728.050 kb on + strand at 728.073 kb on + strand at 728.089 kb on + strand at 728.121 kb on - strand at 728.259 kb on + strand at 728.275 kb on + strand at 728.283 kb on - strand at 728.393 kb on + strand, within BWI76_RS03515 at 728.439 kb on - strand, within BWI76_RS03515 at 728.660 kb on + strand, within BWI76_RS03515 at 729.171 kb on + strand at 729.267 kb on - strand at 729.273 kb on + strand at 729.278 kb on + strand at 729.347 kb on - strand at 729.347 kb on - strand at 729.469 kb on + strand at 729.471 kb on + strand at 729.479 kb on - strand at 729.528 kb on + strand at 729.536 kb on - strand at 729.579 kb on + strand at 729.579 kb on + strand at 729.587 kb on + strand at 729.589 kb on + strand at 729.595 kb on - strand at 729.595 kb on - strand at 729.631 kb on - strand at 729.646 kb on - strand at 729.646 kb on - strand at 729.654 kb on - strand at 729.658 kb on + strand at 729.659 kb on + strand at 729.667 kb on - strand at 729.667 kb on - strand at 729.713 kb on + strand at 729.713 kb on + strand at 729.720 kb on - strand at 729.721 kb on - strand at 729.721 kb on - strand at 729.726 kb on + strand at 729.726 kb on + strand at 729.732 kb on - strand at 729.734 kb on + strand at 729.734 kb on - strand at 729.744 kb on - strand at 729.757 kb on + strand at 729.757 kb on + strand at 729.757 kb on + strand at 729.759 kb on + strand at 729.759 kb on + strand at 729.759 kb on + strand at 729.759 kb on + strand at 729.765 kb on - strand at 729.767 kb on - strand at 729.767 kb on - strand at 729.767 kb on - strand at 729.772 kb on - strand at 729.835 kb on + strand at 729.835 kb on + strand at 729.835 kb on + strand at 729.835 kb on + strand at 729.835 kb on + strand at 729.835 kb on + strand at 729.835 kb on + strand at 729.835 kb on + strand at 729.835 kb on + strand at 729.835 kb on + strand at 729.835 kb on + strand at 729.835 kb on + strand at 729.835 kb on + strand at 729.835 kb on + strand at 729.835 kb on + strand at 729.837 kb on + strand at 729.839 kb on + strand at 729.843 kb on - strand at 729.843 kb on - strand at 729.843 kb on - strand at 729.843 kb on - strand at 729.843 kb on - strand at 729.843 kb on - strand at 729.843 kb on - strand at 729.843 kb on - strand at 729.843 kb on - strand at 729.843 kb on - strand at 729.843 kb on - strand at 729.843 kb on - strand at 729.843 kb on - strand at 729.845 kb on + strand at 729.845 kb on + strand at 729.845 kb on + strand at 729.845 kb on + strand at 729.845 kb on + strand at 729.845 kb on + strand at 729.845 kb on - strand at 729.845 kb on - strand at 729.853 kb on - strand at 729.853 kb on - strand at 729.853 kb on - strand at 729.853 kb on - strand at 729.853 kb on - strand at 729.853 kb on - strand at 729.853 kb on - strand at 729.853 kb on - strand at 729.857 kb on + strand at 729.858 kb on + strand at 729.858 kb on + strand at 729.858 kb on + strand at 729.858 kb on + strand at 729.858 kb on + strand at 729.858 kb on + strand at 729.858 kb on + strand at 729.859 kb on - strand at 729.861 kb on - strand at 729.866 kb on - strand at 729.866 kb on - strand at 729.878 kb on + strand at 729.878 kb on - strand at 729.894 kb on + strand at 729.895 kb on + strand at 729.901 kb on - strand at 729.955 kb on + strand, within BWI76_RS03520 at 729.973 kb on + strand, within BWI76_RS03520 at 729.973 kb on + strand, within BWI76_RS03520 at 729.973 kb on + strand, within BWI76_RS03520 at 729.981 kb on - strand, within BWI76_RS03520 at 729.981 kb on - strand, within BWI76_RS03520 at 729.981 kb on - strand, within BWI76_RS03520 at 729.984 kb on + strand, within BWI76_RS03520 at 729.984 kb on + strand, within BWI76_RS03520 at 729.984 kb on + strand, within BWI76_RS03520 at 729.999 kb on + strand, within BWI76_RS03520 at 730.026 kb on - strand, within BWI76_RS03520 at 730.087 kb on - strand, within BWI76_RS03520 at 730.134 kb on + strand, within BWI76_RS03520 at 730.203 kb on + strand, within BWI76_RS03520 at 730.231 kb on + strand, within BWI76_RS03520
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 727,281 + BWI76_RS03510 0.67 -0.6 727,485 - BWI76_RS03510 0.74 -0.1 727,494 - BWI76_RS03510 0.75 +0.3 727,809 - BWI76_RS03510 0.86 +0.7 727,859 + BWI76_RS03510 0.88 +0.4 727,933 - -0.0 727,957 + -0.1 728,050 + -0.3 728,073 + +0.7 728,089 + +0.5 728,121 - -1.7 728,259 + +0.2 728,275 + +2.0 728,283 - -0.3 728,393 + BWI76_RS03515 0.20 +0.2 728,439 - BWI76_RS03515 0.24 +0.4 728,660 + BWI76_RS03515 0.45 +1.9 729,171 + -0.5 729,267 - -0.0 729,273 + -0.2 729,278 + -2.2 729,347 - +0.7 729,347 - +1.4 729,469 + -1.5 729,471 + -0.1 729,479 - -1.6 729,528 + +0.2 729,536 - +0.3 729,579 + +0.3 729,579 + +0.3 729,587 + -0.6 729,589 + +0.1 729,595 - +0.3 729,595 - +0.5 729,631 - +2.5 729,646 - -1.0 729,646 - +0.4 729,654 - +1.0 729,658 + -0.2 729,659 + +0.4 729,667 - -0.5 729,667 - +0.5 729,713 + +0.2 729,713 + +0.1 729,720 - +0.4 729,721 - +0.1 729,721 - +0.4 729,726 + -0.4 729,726 + -0.7 729,732 - +1.4 729,734 + +0.1 729,734 - +0.4 729,744 - -0.3 729,757 + +0.4 729,757 + +0.3 729,757 + +0.3 729,759 + -0.3 729,759 + +0.1 729,759 + -0.4 729,759 + -1.1 729,765 - -0.4 729,767 - -0.9 729,767 - +0.3 729,767 - -0.3 729,772 - +0.3 729,835 + -0.1 729,835 + +0.1 729,835 + -0.6 729,835 + +0.3 729,835 + +0.6 729,835 + +1.0 729,835 + -0.7 729,835 + -1.6 729,835 + +0.5 729,835 + +0.4 729,835 + +0.4 729,835 + +0.6 729,835 + -0.0 729,835 + +0.4 729,835 + +0.3 729,837 + -0.7 729,839 + -1.6 729,843 - -0.1 729,843 - -0.3 729,843 - +0.9 729,843 - +1.2 729,843 - -1.7 729,843 - +0.3 729,843 - +0.6 729,843 - +0.1 729,843 - +0.8 729,843 - +0.3 729,843 - -0.2 729,843 - +0.3 729,843 - -0.9 729,845 + -0.5 729,845 + +0.1 729,845 + +0.2 729,845 + -1.7 729,845 + -0.3 729,845 + -0.3 729,845 - +1.0 729,845 - -1.1 729,853 - -0.4 729,853 - +0.3 729,853 - +0.0 729,853 - +1.0 729,853 - +0.1 729,853 - -0.1 729,853 - +0.7 729,853 - -0.2 729,857 + -0.8 729,858 + -2.2 729,858 + +0.2 729,858 + +1.0 729,858 + +1.5 729,858 + +0.5 729,858 + +0.3 729,858 + +0.1 729,859 - -0.1 729,861 - -0.4 729,866 - -0.4 729,866 - +1.2 729,878 + +0.9 729,878 - +0.1 729,894 + -0.1 729,895 + +0.4 729,901 - -0.9 729,955 + BWI76_RS03520 0.12 +0.7 729,973 + BWI76_RS03520 0.14 +1.4 729,973 + BWI76_RS03520 0.14 -0.1 729,973 + BWI76_RS03520 0.14 +0.1 729,981 - BWI76_RS03520 0.14 -0.5 729,981 - BWI76_RS03520 0.14 -0.3 729,981 - BWI76_RS03520 0.14 +0.1 729,984 + BWI76_RS03520 0.15 -0.1 729,984 + BWI76_RS03520 0.15 +0.3 729,984 + BWI76_RS03520 0.15 +0.1 729,999 + BWI76_RS03520 0.16 +0.7 730,026 - BWI76_RS03520 0.18 -0.5 730,087 - BWI76_RS03520 0.22 +0.8 730,134 + BWI76_RS03520 0.25 +0.4 730,203 + BWI76_RS03520 0.30 +0.8 730,231 + BWI76_RS03520 0.32 -0.8
Or see this region's nucleotide sequence