Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4445

Experiment: Thallium(I) acetate 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thallium(I) acetate 0.025 mg/ml
5,854,789	+				+3.6
5,854,800	+		BT4443	0.53	-2.9
5,854,852	+		BT4443	0.61	-1.7
5,854,853	-		BT4443	0.61	-0.1
5,854,953	+		BT4443	0.76	-1.2
5,854,963	+		BT4443	0.77	-1.8
5,855,069	-				+0.0
5,855,084	-				-2.5
5,855,117	+				-1.6
5,855,118	-				+0.0
5,855,125	-				-1.2
5,855,125	-				-2.4
5,855,125	-				-1.7
5,855,126	+				-1.0
5,855,127	-				-0.6
5,855,180	-		BT4444	0.18	-1.4
5,855,226	+		BT4444	0.30	-2.3
5,855,227	-		BT4444	0.30	-2.1
5,855,228	+		BT4444	0.30	+0.6
5,855,244	-		BT4444	0.34	-0.6
5,855,257	-		BT4444	0.38	-0.7
5,855,264	-		BT4444	0.39	+1.6
5,855,284	-		BT4444	0.44	-1.2
5,855,291	-		BT4444	0.46	+0.0
5,855,308	+		BT4444	0.50	-0.7
5,855,315	-		BT4444	0.52	-0.6
5,855,320	+		BT4444	0.53	-1.1
5,855,448	+		BT4444	0.85	-2.9
5,855,452	-		BT4444	0.86	-3.3
5,855,491	-				+0.4
5,855,501	+				+0.6
5,855,511	+				-1.2
5,855,521	+				-1.2
5,855,528	+				+0.0
5,855,598	-				+0.5
5,855,619	+				-1.0
5,855,620	-				-0.5
5,855,620	-				-0.6
5,855,621	+				+0.6
5,855,622	-				-0.4
5,855,626	+				+1.2
5,855,627	-				+0.0
5,855,629	-				-0.9
5,855,633	-				-1.0
5,855,678	+				-2.5
5,855,690	+				-1.0
5,855,755	-				-0.1
5,855,777	+				-0.6
5,855,777	+				-0.1
5,855,799	-				+0.6
5,855,819	+				-1.2
5,855,819	+				-1.0
5,855,821	+				-0.7
5,855,821	+				+0.9
5,855,833	-				-1.5
5,855,839	-				+1.1
5,855,875	+				-0.6
5,855,892	-		BT4445	0.10	+2.2
5,855,977	+		BT4445	0.15	-0.1
5,855,977	+		BT4445	0.15	-2.5
5,855,977	+		BT4445	0.15	+1.6
5,856,164	+		BT4445	0.26	-0.9
5,856,164	+		BT4445	0.26	-1.0
5,856,195	-		BT4445	0.28	-1.4
5,856,212	+		BT4445	0.29	-1.3
5,856,272	-		BT4445	0.33	+1.6
5,856,366	+		BT4445	0.38	+0.9
5,856,366	+		BT4445	0.38	-2.5
5,856,373	+		BT4445	0.38	-1.0
5,856,373	+		BT4445	0.38	-0.7
5,856,376	+		BT4445	0.39	+0.4
5,856,376	+		BT4445	0.39	-1.2
5,856,377	-		BT4445	0.39	-0.9
5,856,398	+		BT4445	0.40	-0.4
5,856,399	-		BT4445	0.40	-0.5
5,856,399	-		BT4445	0.40	+0.0
5,856,404	-		BT4445	0.40	-2.4
5,856,443	-		BT4445	0.42	-1.2
5,856,443	-		BT4445	0.42	-1.0
5,856,476	+		BT4445	0.44	+0.0
5,856,486	-		BT4445	0.45	-3.4
5,856,496	+		BT4445	0.46	-0.4
5,856,596	-		BT4445	0.51	-1.1
5,856,602	-		BT4445	0.52	+0.2
5,856,610	+		BT4445	0.52	-1.4
5,856,678	+		BT4445	0.56	-1.2
5,856,682	+		BT4445	0.56	-1.7
5,856,692	-		BT4445	0.57	-2.0
5,856,692	-		BT4445	0.57	+0.3
5,856,754	+		BT4445	0.61	-0.9
5,856,755	-		BT4445	0.61	-0.9
5,856,769	-		BT4445	0.61	+1.6
5,856,769	-		BT4445	0.61	-1.4
5,856,773	+		BT4445	0.62	+0.9
5,856,774	-		BT4445	0.62	+0.6
5,856,774	-		BT4445	0.62	-1.4
5,856,871	+		BT4445	0.67	+0.1
5,856,877	+		BT4445	0.68	-0.4
5,856,882	-		BT4445	0.68	-0.7
5,856,901	+		BT4445	0.69	+0.0
5,856,923	-		BT4445	0.70	+0.0
5,856,932	+		BT4445	0.71	-1.6
5,856,943	-		BT4445	0.72	+1.0
5,857,144	+		BT4445	0.83	-0.7
5,857,144	+		BT4445	0.83	-0.7
5,857,145	-		BT4445	0.83	-0.7
5,857,221	-		BT4445	0.88	-1.6
5,857,223	-		BT4445	0.88	+1.6
5,857,236	+		BT4445	0.89	-1.3
5,857,251	-		BT4445	0.90	-0.2
5,857,253	+		BT4445	0.90	-1.9
5,857,281	+				-0.7
5,857,357	+				-1.6
5,857,361	+				-0.2
5,857,385	+				-1.1
5,857,385	+				+0.3
5,857,385	+				-1.3
5,857,385	+				-1.4
5,857,386	-				+0.6
5,857,386	-				+0.6
5,857,387	+				-0.5
5,857,387	+				-1.0
5,857,424	+				-1.7
5,857,425	-				+0.3
5,857,428	-				+0.3
5,857,463	+				-0.9
5,857,498	+				-0.5
5,857,499	-				-0.2
5,857,509	-				-0.9
5,857,509	-				-0.7
5,857,513	+				-0.1
5,857,514	-				-1.3
5,857,547	-				+1.3
5,857,576	-				-0.4
5,857,588	+				-0.7
5,857,597	-		BT4446	0.11	-0.7
5,857,610	+		BT4446	0.12	+0.3
5,857,610	+		BT4446	0.12	-1.0
5,857,611	-		BT4446	0.12	-0.4
5,857,611	-		BT4446	0.12	-0.9
5,857,618	-		BT4446	0.13	+0.1
5,857,647	-		BT4446	0.16	+0.1
5,857,647	-		BT4446	0.16	+0.3
5,857,665	-		BT4446	0.18	-1.7
5,857,665	-		BT4446	0.18	-0.2
5,857,670	+		BT4446	0.19	-0.7
5,857,774	-		BT4446	0.31	-0.2
5,857,774	-		BT4446	0.31	-1.9
5,857,796	-		BT4446	0.33	-1.0
5,857,820	+		BT4446	0.36	-0.7
5,857,822	+		BT4446	0.36	-0.8
5,857,822	+		BT4446	0.36	-0.4
5,857,823	-		BT4446	0.36	-1.2
5,857,875	-		BT4446	0.42	+1.6
5,857,986	+		BT4446	0.54	-0.1
5,857,994	-		BT4446	0.55	-1.6
5,858,012	+		BT4446	0.57	-1.9
5,858,112	+		BT4446	0.69	-0.7
5,858,113	-		BT4446	0.69	-0.5
5,858,145	-		BT4446	0.72	-0.2
5,858,185	+		BT4446	0.77	-1.9
5,858,210	-		BT4446	0.80	+0.3
5,858,239	-		BT4446	0.83	-2.0
5,858,263	-		BT4446	0.86	+0.5
5,858,290	-		BT4446	0.89	+2.6
5,858,361	+				-1.1
5,858,361	+				-0.7
5,858,366	-				-0.9
5,858,391	+				-0.3
5,858,427	-				-0.9