Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0758

Experiment: Thallium(I) acetate 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBT0757 and BT0758 are separated by 223 nucleotidesBT0758 and BT0759 are separated by 132 nucleotidesBT0759 and BT0760 are separated by 575 nucleotides BT0757: BT0757 - beta-galactosidase (NCBI ptt file), at 943,044 to 945,092 BT0757 BT0758: BT0758 - acetyltransferase (NCBI ptt file), at 945,316 to 945,888 BT0758 BT0759: BT0759 - hypothetical protein (NCBI ptt file), at 946,021 to 946,200 BT0759 BT0760: BT0760 - two-component system response regulator (NCBI ptt file), at 946,776 to 948,464 BT0760 Position (kb) 945 946Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 944.337 kb on + strand, within BT0757at 944.378 kb on + strand, within BT0757at 944.402 kb on + strand, within BT0757at 944.489 kb on - strand, within BT0757at 944.508 kb on - strand, within BT0757at 944.593 kb on + strand, within BT0757at 944.640 kb on + strand, within BT0757at 944.651 kb on - strand, within BT0757at 944.683 kb on - strand, within BT0757at 944.685 kb on - strand, within BT0757at 944.701 kb on + strand, within BT0757at 944.708 kb on + strand, within BT0757at 944.759 kb on + strand, within BT0757at 944.960 kb on + strandat 944.979 kb on + strandat 945.071 kb on + strandat 945.088 kb on + strandat 945.161 kb on + strandat 945.276 kb on + strandat 945.330 kb on + strandat 945.343 kb on - strandat 945.375 kb on - strand, within BT0758at 945.589 kb on + strand, within BT0758at 945.606 kb on - strand, within BT0758at 945.671 kb on + strand, within BT0758at 946.023 kb on - strandat 946.025 kb on + strandat 946.110 kb on - strand, within BT0759at 946.242 kb on + strandat 946.243 kb on - strandat 946.259 kb on - strandat 946.284 kb on + strandat 946.302 kb on + strandat 946.304 kb on + strandat 946.351 kb on + strandat 946.411 kb on + strandat 946.641 kb on + strandat 946.772 kb on + strandat 946.794 kb on - strandat 946.848 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.025 mg/ml
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944,337 + BT0757 0.63 +2.6
944,378 + BT0757 0.65 -0.2
944,402 + BT0757 0.66 +0.0
944,489 - BT0757 0.71 -0.9
944,508 - BT0757 0.71 +0.6
944,593 + BT0757 0.76 -1.0
944,640 + BT0757 0.78 -1.0
944,651 - BT0757 0.78 -1.7
944,683 - BT0757 0.80 -2.8
944,685 - BT0757 0.80 +1.9
944,701 + BT0757 0.81 -2.2
944,708 + BT0757 0.81 -0.7
944,759 + BT0757 0.84 -0.4
944,960 + +0.3
944,979 + -0.1
945,071 + +1.0
945,088 + -0.3
945,161 + -0.7
945,276 + +0.6
945,330 + -1.7
945,343 - +0.0
945,375 - BT0758 0.10 +0.9
945,589 + BT0758 0.48 +2.1
945,606 - BT0758 0.51 +1.3
945,671 + BT0758 0.62 -0.7
946,023 - +0.0
946,025 + +1.6
946,110 - BT0759 0.49 +0.2
946,242 + +1.6
946,243 - -0.5
946,259 - -1.5
946,284 + -1.4
946,302 + -1.2
946,304 + +0.3
946,351 + -0.4
946,411 + -0.7
946,641 + -0.4
946,772 + +1.6
946,794 - -1.2
946,848 - -1.7

Or see this region's nucleotide sequence