Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3298

Experiment: Formate/Acetate-Sulfate (60/30-30 mM) with Casaminos 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/30-30 mM) with Casaminos 0.05%
3,474,992	+	mtr	DVU3297	0.40	-0.4
3,475,000	-	mtr	DVU3297	0.41	+0.1
3,475,005	-	mtr	DVU3297	0.41	-0.2
3,475,014	+	mtr	DVU3297	0.42	-1.3
3,475,109	-	mtr	DVU3297	0.50	-0.5
3,475,120	+	mtr	DVU3297	0.51	+0.9
3,475,164	+	mtr	DVU3297	0.54	+0.3
3,475,164	+	mtr	DVU3297	0.54	+0.1
3,475,210	-	mtr	DVU3297	0.58	-0.8
3,475,219	+	mtr	DVU3297	0.58	-0.1
3,475,237	-	mtr	DVU3297	0.60	-0.1
3,475,244	-	mtr	DVU3297	0.60	-1.0
3,475,301	-	mtr	DVU3297	0.65	-0.5
3,475,344	+	mtr	DVU3297	0.68	+0.4
3,475,503	-	mtr	DVU3297	0.81	+0.5
3,475,552	+	mtr	DVU3297	0.85	+0.1
3,475,706	-				-1.1
3,475,793	+				-1.0
3,475,804	-				+0.3
3,475,825	-				-0.2
3,475,832	-				-1.6
3,475,837	-				+0.1
3,475,854	+				-0.4
3,475,873	-				+0.1
3,475,883	-				-0.4
3,475,889	+				-0.2
3,475,909	-				-0.6
3,475,986	-				-0.5
3,476,026	-				+0.5
3,476,045	-				-0.1
3,476,137	-		DVU3298	0.19	-0.9
3,476,194	+		DVU3298	0.26	-0.8
3,476,208	+		DVU3298	0.28	-1.2
3,476,243	+		DVU3298	0.33	+0.3
3,476,267	+		DVU3298	0.36	-0.9
3,476,275	-		DVU3298	0.37	-0.2
3,476,275	-		DVU3298	0.37	-0.6
3,476,309	+		DVU3298	0.41	+0.5
3,476,340	+		DVU3298	0.45	-1.0
3,476,381	+		DVU3298	0.50	-1.0
3,476,381	+		DVU3298	0.50	-0.6
3,476,389	-		DVU3298	0.51	-0.6
3,476,389	-		DVU3298	0.51	-1.5
3,476,398	+		DVU3298	0.52	-0.7
3,476,433	-		DVU3298	0.57	-0.6
3,476,466	-		DVU3298	0.61	-0.9
3,476,484	+		DVU3298	0.63	-1.0
3,476,560	+		DVU3298	0.73	-1.3
3,476,588	-		DVU3298	0.77	-0.6
3,476,623	+		DVU3298	0.81	-1.1
3,476,625	-		DVU3298	0.81	-0.8
3,476,841	+				+1.0
3,476,881	+		DVU3299	0.12	-0.4
3,476,919	-		DVU3299	0.15	+1.2
3,476,968	-		DVU3299	0.20	+0.7
3,477,102	-		DVU3299	0.32	+1.2
3,477,342	-		DVU3299	0.55	+0.9
3,477,379	+		DVU3299	0.58	+1.2
3,477,552	+		DVU3299	0.74	+1.4
3,477,552	+		DVU3299	0.74	+1.9
3,477,670	+		DVU3299	0.85	+1.2
3,477,670	+		DVU3299	0.85	+1.2
3,477,670	+		DVU3299	0.85	-1.6
3,477,678	-		DVU3299	0.86	+0.4
3,477,678	-		DVU3299	0.86	+0.8
3,477,712	-		DVU3299	0.89	+1.2