Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS27810

Experiment: D-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS27805 and BWI76_RS27810 are separated by 52 nucleotidesBWI76_RS27810 and BWI76_RS27815 are separated by 3 nucleotides BWI76_RS27805: BWI76_RS27805 - membrane protein, at 5,769,421 to 5,770,293 _RS27805 BWI76_RS27810: BWI76_RS27810 - acetolactate synthase isozyme 1 small subunit, at 5,770,346 to 5,770,636 _RS27810 BWI76_RS27815: BWI76_RS27815 - acetolactate synthase catalytic subunit, at 5,770,640 to 5,772,328 _RS27815 Position (kb) 5770 5771Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3at 5769.364 kb on + strandat 5769.366 kb on + strandat 5769.378 kb on + strandat 5769.411 kb on + strandat 5769.436 kb on + strandat 5769.445 kb on + strandat 5769.495 kb on + strandat 5769.503 kb on - strandat 5769.510 kb on - strand, within BWI76_RS27805at 5769.519 kb on - strand, within BWI76_RS27805at 5769.552 kb on + strand, within BWI76_RS27805at 5769.586 kb on + strand, within BWI76_RS27805at 5769.594 kb on + strand, within BWI76_RS27805at 5769.595 kb on + strand, within BWI76_RS27805at 5769.602 kb on + strand, within BWI76_RS27805at 5769.603 kb on - strand, within BWI76_RS27805at 5769.612 kb on + strandat 5769.805 kb on + strand, within BWI76_RS27805at 5769.810 kb on + strand, within BWI76_RS27805at 5769.813 kb on - strand, within BWI76_RS27805at 5769.858 kb on + strand, within BWI76_RS27805at 5769.899 kb on - strand, within BWI76_RS27805at 5769.901 kb on - strand, within BWI76_RS27805at 5769.949 kb on + strand, within BWI76_RS27805at 5769.949 kb on + strand, within BWI76_RS27805at 5769.949 kb on + strand, within BWI76_RS27805at 5769.949 kb on + strand, within BWI76_RS27805at 5769.949 kb on + strand, within BWI76_RS27805at 5769.949 kb on + strand, within BWI76_RS27805at 5769.949 kb on + strand, within BWI76_RS27805at 5769.949 kb on + strand, within BWI76_RS27805at 5769.949 kb on + strand, within BWI76_RS27805at 5769.949 kb on + strand, within BWI76_RS27805at 5769.951 kb on + strand, within BWI76_RS27805at 5769.957 kb on - strand, within BWI76_RS27805at 5769.957 kb on - strand, within BWI76_RS27805at 5769.957 kb on - strand, within BWI76_RS27805at 5769.957 kb on - strand, within BWI76_RS27805at 5769.957 kb on - strand, within BWI76_RS27805at 5769.957 kb on - strand, within BWI76_RS27805at 5769.957 kb on - strand, within BWI76_RS27805at 5769.959 kb on - strand, within BWI76_RS27805at 5769.973 kb on - strand, within BWI76_RS27805at 5769.974 kb on - strand, within BWI76_RS27805at 5769.974 kb on - strand, within BWI76_RS27805at 5769.980 kb on + strand, within BWI76_RS27805at 5769.980 kb on + strand, within BWI76_RS27805at 5769.980 kb on + strand, within BWI76_RS27805at 5769.986 kb on - strand, within BWI76_RS27805at 5769.988 kb on - strand, within BWI76_RS27805at 5769.991 kb on + strand, within BWI76_RS27805at 5769.999 kb on + strand, within BWI76_RS27805at 5769.999 kb on + strand, within BWI76_RS27805at 5770.007 kb on - strand, within BWI76_RS27805at 5770.013 kb on + strand, within BWI76_RS27805at 5770.013 kb on + strand, within BWI76_RS27805at 5770.021 kb on - strand, within BWI76_RS27805at 5770.030 kb on + strand, within BWI76_RS27805at 5770.044 kb on + strand, within BWI76_RS27805at 5770.044 kb on + strand, within BWI76_RS27805at 5770.047 kb on + strand, within BWI76_RS27805at 5770.047 kb on + strand, within BWI76_RS27805at 5770.049 kb on + strand, within BWI76_RS27805at 5770.049 kb on + strand, within BWI76_RS27805at 5770.049 kb on + strand, within BWI76_RS27805at 5770.052 kb on - strand, within BWI76_RS27805at 5770.053 kb on + strand, within BWI76_RS27805at 5770.055 kb on - strand, within BWI76_RS27805at 5770.057 kb on - strand, within BWI76_RS27805at 5770.057 kb on - strand, within BWI76_RS27805at 5770.057 kb on - strand, within BWI76_RS27805at 5770.057 kb on - strand, within BWI76_RS27805at 5770.067 kb on + strand, within BWI76_RS27805at 5770.067 kb on + strand, within BWI76_RS27805at 5770.067 kb on + strand, within BWI76_RS27805at 5770.067 kb on + strand, within BWI76_RS27805at 5770.067 kb on + strand, within BWI76_RS27805at 5770.067 kb on + strand, within BWI76_RS27805at 5770.067 kb on + strand, within BWI76_RS27805at 5770.067 kb on + strand, within BWI76_RS27805at 5770.067 kb on + strandat 5770.067 kb on + strand, within BWI76_RS27805at 5770.067 kb on + strand, within BWI76_RS27805at 5770.067 kb on + strand, within BWI76_RS27805at 5770.067 kb on + strand, within BWI76_RS27805at 5770.067 kb on + strand, within BWI76_RS27805at 5770.074 kb on + strand, within BWI76_RS27805at 5770.075 kb on - strand, within BWI76_RS27805at 5770.075 kb on - strand, within BWI76_RS27805at 5770.075 kb on - strand, within BWI76_RS27805at 5770.075 kb on - strand, within BWI76_RS27805at 5770.075 kb on - strand, within BWI76_RS27805at 5770.075 kb on - strand, within BWI76_RS27805at 5770.075 kb on - strand, within BWI76_RS27805at 5770.075 kb on - strand, within BWI76_RS27805at 5770.077 kb on + strand, within BWI76_RS27805at 5770.077 kb on + strand, within BWI76_RS27805at 5770.092 kb on + strand, within BWI76_RS27805at 5770.092 kb on + strand, within BWI76_RS27805at 5770.094 kb on + strand, within BWI76_RS27805at 5770.095 kb on - strand, within BWI76_RS27805at 5770.097 kb on - strand, within BWI76_RS27805at 5770.100 kb on - strand, within BWI76_RS27805at 5770.101 kb on - strand, within BWI76_RS27805at 5770.107 kb on + strand, within BWI76_RS27805at 5770.107 kb on + strand, within BWI76_RS27805at 5770.107 kb on + strand, within BWI76_RS27805at 5770.107 kb on + strand, within BWI76_RS27805at 5770.107 kb on + strand, within BWI76_RS27805at 5770.107 kb on + strand, within BWI76_RS27805at 5770.107 kb on + strand, within BWI76_RS27805at 5770.107 kb on + strand, within BWI76_RS27805at 5770.107 kb on + strand, within BWI76_RS27805at 5770.115 kb on - strand, within BWI76_RS27805at 5770.115 kb on - strand, within BWI76_RS27805at 5770.115 kb on - strand, within BWI76_RS27805at 5770.115 kb on - strand, within BWI76_RS27805at 5770.115 kb on - strand, within BWI76_RS27805at 5770.216 kb on + strandat 5770.216 kb on + strandat 5770.228 kb on + strandat 5770.258 kb on + strandat 5770.259 kb on + strandat 5770.259 kb on + strandat 5770.259 kb on + strandat 5770.259 kb on + strandat 5770.267 kb on - strandat 5770.272 kb on + strandat 5770.288 kb on + strandat 5770.294 kb on + strandat 5770.294 kb on + strandat 5770.294 kb on + strandat 5770.303 kb on + strandat 5770.305 kb on + strandat 5770.312 kb on - strandat 5770.348 kb on - strandat 5770.375 kb on + strandat 5770.375 kb on + strand, within BWI76_RS27810at 5770.376 kb on + strand, within BWI76_RS27810at 5770.383 kb on + strand, within BWI76_RS27810at 5770.383 kb on - strand, within BWI76_RS27810at 5770.383 kb on - strand, within BWI76_RS27810at 5770.383 kb on - strand, within BWI76_RS27810at 5770.383 kb on - strand, within BWI76_RS27810at 5770.383 kb on - strand, within BWI76_RS27810at 5770.383 kb on - strand, within BWI76_RS27810at 5770.383 kb on - strand, within BWI76_RS27810at 5770.391 kb on - strand, within BWI76_RS27810at 5770.391 kb on - strand, within BWI76_RS27810at 5770.391 kb on - strand, within BWI76_RS27810at 5770.394 kb on + strand, within BWI76_RS27810at 5770.397 kb on + strand, within BWI76_RS27810at 5770.401 kb on - strand, within BWI76_RS27810at 5770.402 kb on - strand, within BWI76_RS27810at 5770.402 kb on - strand, within BWI76_RS27810at 5770.405 kb on - strand, within BWI76_RS27810at 5770.405 kb on - strand, within BWI76_RS27810at 5770.405 kb on - strand, within BWI76_RS27810at 5770.416 kb on + strand, within BWI76_RS27810at 5770.416 kb on + strand, within BWI76_RS27810at 5770.417 kb on - strand, within BWI76_RS27810at 5770.424 kb on - strand, within BWI76_RS27810at 5770.425 kb on - strand, within BWI76_RS27810at 5770.425 kb on - strand, within BWI76_RS27810at 5770.435 kb on + strand, within BWI76_RS27810at 5770.436 kb on + strand, within BWI76_RS27810at 5770.442 kb on + strand, within BWI76_RS27810at 5770.442 kb on + strand, within BWI76_RS27810at 5770.454 kb on + strand, within BWI76_RS27810at 5770.472 kb on - strand, within BWI76_RS27810at 5770.472 kb on - strand, within BWI76_RS27810at 5770.487 kb on + strand, within BWI76_RS27810at 5770.497 kb on - strand, within BWI76_RS27810at 5770.507 kb on - strand, within BWI76_RS27810at 5770.507 kb on - strand, within BWI76_RS27810at 5770.589 kb on - strand, within BWI76_RS27810at 5770.601 kb on - strand, within BWI76_RS27810at 5770.646 kb on - strandat 5770.654 kb on + strandat 5770.659 kb on + strandat 5770.667 kb on - strandat 5770.667 kb on - strandat 5770.667 kb on - strandat 5770.680 kb on + strandat 5770.681 kb on - strandat 5770.735 kb on - strandat 5770.735 kb on - strandat 5770.771 kb on + strandat 5770.804 kb on + strandat 5770.830 kb on + strand, within BWI76_RS27815at 5770.840 kb on + strand, within BWI76_RS27815at 5770.840 kb on + strand, within BWI76_RS27815at 5770.840 kb on + strand, within BWI76_RS27815at 5770.859 kb on + strand, within BWI76_RS27815at 5771.016 kb on + strand, within BWI76_RS27815at 5771.016 kb on + strand, within BWI76_RS27815at 5771.024 kb on - strand, within BWI76_RS27815at 5771.041 kb on - strand, within BWI76_RS27815at 5771.062 kb on + strand, within BWI76_RS27815at 5771.147 kb on + strand, within BWI76_RS27815at 5771.158 kb on + strand, within BWI76_RS27815at 5771.202 kb on + strand, within BWI76_RS27815at 5771.230 kb on + strand, within BWI76_RS27815at 5771.258 kb on - strand, within BWI76_RS27815at 5771.291 kb on - strand, within BWI76_RS27815at 5771.298 kb on - strand, within BWI76_RS27815at 5771.330 kb on - strand, within BWI76_RS27815at 5771.392 kb on + strand, within BWI76_RS27815at 5771.392 kb on + strand, within BWI76_RS27815at 5771.392 kb on + strandat 5771.392 kb on + strand, within BWI76_RS27815at 5771.400 kb on - strand, within BWI76_RS27815at 5771.402 kb on + strand, within BWI76_RS27815at 5771.608 kb on - strand, within BWI76_RS27815

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Lactate (C)
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5,769,364 + +0.1
5,769,366 + -3.1
5,769,378 + +0.0
5,769,411 + -0.7
5,769,436 + +0.1
5,769,445 + -0.4
5,769,495 + -0.1
5,769,503 - -0.6
5,769,510 - BWI76_RS27805 0.10 -0.9
5,769,519 - BWI76_RS27805 0.11 -0.1
5,769,552 + BWI76_RS27805 0.15 -0.2
5,769,586 + BWI76_RS27805 0.19 +0.3
5,769,594 + BWI76_RS27805 0.20 +0.7
5,769,595 + BWI76_RS27805 0.20 -0.6
5,769,602 + BWI76_RS27805 0.21 -1.5
5,769,603 - BWI76_RS27805 0.21 -0.2
5,769,612 + -0.3
5,769,805 + BWI76_RS27805 0.44 -1.7
5,769,810 + BWI76_RS27805 0.45 +0.5
5,769,813 - BWI76_RS27805 0.45 -0.0
5,769,858 + BWI76_RS27805 0.50 -2.1
5,769,899 - BWI76_RS27805 0.55 +1.0
5,769,901 - BWI76_RS27805 0.55 +0.4
5,769,949 + BWI76_RS27805 0.60 +0.1
5,769,949 + BWI76_RS27805 0.60 +0.4
5,769,949 + BWI76_RS27805 0.60 +1.4
5,769,949 + BWI76_RS27805 0.60 +0.0
5,769,949 + BWI76_RS27805 0.60 +0.2
5,769,949 + BWI76_RS27805 0.60 -0.4
5,769,949 + BWI76_RS27805 0.60 -1.4
5,769,949 + BWI76_RS27805 0.60 +2.0
5,769,949 + BWI76_RS27805 0.60 +0.5
5,769,949 + BWI76_RS27805 0.60 -0.0
5,769,951 + BWI76_RS27805 0.61 +2.1
5,769,957 - BWI76_RS27805 0.61 -0.3
5,769,957 - BWI76_RS27805 0.61 -0.9
5,769,957 - BWI76_RS27805 0.61 +3.0
5,769,957 - BWI76_RS27805 0.61 +0.7
5,769,957 - BWI76_RS27805 0.61 -0.7
5,769,957 - BWI76_RS27805 0.61 -2.5
5,769,957 - BWI76_RS27805 0.61 +0.0
5,769,959 - BWI76_RS27805 0.62 -0.2
5,769,973 - BWI76_RS27805 0.63 -0.0
5,769,974 - BWI76_RS27805 0.63 -1.1
5,769,974 - BWI76_RS27805 0.63 -0.0
5,769,980 + BWI76_RS27805 0.64 +0.2
5,769,980 + BWI76_RS27805 0.64 -0.2
5,769,980 + BWI76_RS27805 0.64 -2.3
5,769,986 - BWI76_RS27805 0.65 +1.1
5,769,988 - BWI76_RS27805 0.65 -0.4
5,769,991 + BWI76_RS27805 0.65 -0.8
5,769,999 + BWI76_RS27805 0.66 +0.1
5,769,999 + BWI76_RS27805 0.66 +0.5
5,770,007 - BWI76_RS27805 0.67 -0.1
5,770,013 + BWI76_RS27805 0.68 -1.2
5,770,013 + BWI76_RS27805 0.68 +0.5
5,770,021 - BWI76_RS27805 0.69 +0.6
5,770,030 + BWI76_RS27805 0.70 -0.9
5,770,044 + BWI76_RS27805 0.71 +0.3
5,770,044 + BWI76_RS27805 0.71 +1.1
5,770,047 + BWI76_RS27805 0.72 -0.4
5,770,047 + BWI76_RS27805 0.72 -1.1
5,770,049 + BWI76_RS27805 0.72 -1.0
5,770,049 + BWI76_RS27805 0.72 -0.3
5,770,049 + BWI76_RS27805 0.72 -0.9
5,770,052 - BWI76_RS27805 0.72 +0.2
5,770,053 + BWI76_RS27805 0.72 +0.1
5,770,055 - BWI76_RS27805 0.73 -0.1
5,770,057 - BWI76_RS27805 0.73 +0.8
5,770,057 - BWI76_RS27805 0.73 -0.6
5,770,057 - BWI76_RS27805 0.73 -0.4
5,770,057 - BWI76_RS27805 0.73 +0.1
5,770,067 + BWI76_RS27805 0.74 +0.4
5,770,067 + BWI76_RS27805 0.74 -0.3
5,770,067 + BWI76_RS27805 0.74 -0.7
5,770,067 + BWI76_RS27805 0.74 +0.0
5,770,067 + BWI76_RS27805 0.74 +0.7
5,770,067 + BWI76_RS27805 0.74 +2.3
5,770,067 + BWI76_RS27805 0.74 -0.5
5,770,067 + BWI76_RS27805 0.74 -0.3
5,770,067 + +1.7
5,770,067 + BWI76_RS27805 0.74 -0.3
5,770,067 + BWI76_RS27805 0.74 -0.0
5,770,067 + BWI76_RS27805 0.74 +0.1
5,770,067 + BWI76_RS27805 0.74 +0.7
5,770,067 + BWI76_RS27805 0.74 -0.3
5,770,074 + BWI76_RS27805 0.75 +0.5
5,770,075 - BWI76_RS27805 0.75 +0.0
5,770,075 - BWI76_RS27805 0.75 +0.1
5,770,075 - BWI76_RS27805 0.75 +1.1
5,770,075 - BWI76_RS27805 0.75 +0.1
5,770,075 - BWI76_RS27805 0.75 -0.8
5,770,075 - BWI76_RS27805 0.75 -0.6
5,770,075 - BWI76_RS27805 0.75 +0.5
5,770,075 - BWI76_RS27805 0.75 -0.5
5,770,077 + BWI76_RS27805 0.75 +1.3
5,770,077 + BWI76_RS27805 0.75 -0.2
5,770,092 + BWI76_RS27805 0.77 -0.3
5,770,092 + BWI76_RS27805 0.77 -1.6
5,770,094 + BWI76_RS27805 0.77 +0.1
5,770,095 - BWI76_RS27805 0.77 -0.3
5,770,097 - BWI76_RS27805 0.77 +0.8
5,770,100 - BWI76_RS27805 0.78 +0.0
5,770,101 - BWI76_RS27805 0.78 +0.6
5,770,107 + BWI76_RS27805 0.79 +0.1
5,770,107 + BWI76_RS27805 0.79 +0.5
5,770,107 + BWI76_RS27805 0.79 -2.3
5,770,107 + BWI76_RS27805 0.79 -0.6
5,770,107 + BWI76_RS27805 0.79 -0.1
5,770,107 + BWI76_RS27805 0.79 -0.2
5,770,107 + BWI76_RS27805 0.79 +0.0
5,770,107 + BWI76_RS27805 0.79 -0.5
5,770,107 + BWI76_RS27805 0.79 +0.9
5,770,115 - BWI76_RS27805 0.79 -0.4
5,770,115 - BWI76_RS27805 0.79 -0.9
5,770,115 - BWI76_RS27805 0.79 +2.0
5,770,115 - BWI76_RS27805 0.79 +1.4
5,770,115 - BWI76_RS27805 0.79 -2.9
5,770,216 + -0.6
5,770,216 + +0.4
5,770,228 + -0.0
5,770,258 + -0.7
5,770,259 + -0.6
5,770,259 + +0.7
5,770,259 + -0.9
5,770,259 + +0.0
5,770,267 - -1.2
5,770,272 + -0.3
5,770,288 + -1.3
5,770,294 + +1.2
5,770,294 + +1.2
5,770,294 + -1.3
5,770,303 + -0.3
5,770,305 + +0.1
5,770,312 - -0.7
5,770,348 - -0.4
5,770,375 + +0.7
5,770,375 + BWI76_RS27810 0.10 -0.7
5,770,376 + BWI76_RS27810 0.10 +0.7
5,770,383 + BWI76_RS27810 0.13 -1.5
5,770,383 - BWI76_RS27810 0.13 -2.2
5,770,383 - BWI76_RS27810 0.13 -3.6
5,770,383 - BWI76_RS27810 0.13 -0.6
5,770,383 - BWI76_RS27810 0.13 -0.8
5,770,383 - BWI76_RS27810 0.13 -1.4
5,770,383 - BWI76_RS27810 0.13 -1.0
5,770,383 - BWI76_RS27810 0.13 -0.4
5,770,391 - BWI76_RS27810 0.15 -1.4
5,770,391 - BWI76_RS27810 0.15 -0.8
5,770,391 - BWI76_RS27810 0.15 -0.4
5,770,394 + BWI76_RS27810 0.16 -1.1
5,770,397 + BWI76_RS27810 0.18 -0.6
5,770,401 - BWI76_RS27810 0.19 -0.3
5,770,402 - BWI76_RS27810 0.19 -2.1
5,770,402 - BWI76_RS27810 0.19 -0.7
5,770,405 - BWI76_RS27810 0.20 -1.5
5,770,405 - BWI76_RS27810 0.20 +0.8
5,770,405 - BWI76_RS27810 0.20 -0.9
5,770,416 + BWI76_RS27810 0.24 -1.3
5,770,416 + BWI76_RS27810 0.24 -1.7
5,770,417 - BWI76_RS27810 0.24 -3.0
5,770,424 - BWI76_RS27810 0.27 -0.7
5,770,425 - BWI76_RS27810 0.27 -0.8
5,770,425 - BWI76_RS27810 0.27 -1.9
5,770,435 + BWI76_RS27810 0.31 +0.4
5,770,436 + BWI76_RS27810 0.31 -1.9
5,770,442 + BWI76_RS27810 0.33 -1.0
5,770,442 + BWI76_RS27810 0.33 -0.4
5,770,454 + BWI76_RS27810 0.37 -0.3
5,770,472 - BWI76_RS27810 0.43 +0.3
5,770,472 - BWI76_RS27810 0.43 -1.1
5,770,487 + BWI76_RS27810 0.48 -3.0
5,770,497 - BWI76_RS27810 0.52 +0.7
5,770,507 - BWI76_RS27810 0.55 -1.4
5,770,507 - BWI76_RS27810 0.55 -1.9
5,770,589 - BWI76_RS27810 0.84 +1.0
5,770,601 - BWI76_RS27810 0.88 -1.3
5,770,646 - -2.4
5,770,654 + -1.8
5,770,659 + -2.2
5,770,667 - -0.8
5,770,667 - -1.7
5,770,667 - -1.0
5,770,680 + -2.7
5,770,681 - -2.6
5,770,735 - -1.7
5,770,735 - -3.2
5,770,771 + -1.3
5,770,804 + +0.1
5,770,830 + BWI76_RS27815 0.11 -1.3
5,770,840 + BWI76_RS27815 0.12 -2.8
5,770,840 + BWI76_RS27815 0.12 -4.8
5,770,840 + BWI76_RS27815 0.12 -2.2
5,770,859 + BWI76_RS27815 0.13 -2.9
5,771,016 + BWI76_RS27815 0.22 -1.3
5,771,016 + BWI76_RS27815 0.22 -3.5
5,771,024 - BWI76_RS27815 0.23 -2.8
5,771,041 - BWI76_RS27815 0.24 -3.2
5,771,062 + BWI76_RS27815 0.25 -1.8
5,771,147 + BWI76_RS27815 0.30 -2.1
5,771,158 + BWI76_RS27815 0.31 -1.3
5,771,202 + BWI76_RS27815 0.33 -2.0
5,771,230 + BWI76_RS27815 0.35 -2.3
5,771,258 - BWI76_RS27815 0.37 -1.9
5,771,291 - BWI76_RS27815 0.39 -1.2
5,771,298 - BWI76_RS27815 0.39 -1.2
5,771,330 - BWI76_RS27815 0.41 -2.5
5,771,392 + BWI76_RS27815 0.45 -4.0
5,771,392 + BWI76_RS27815 0.45 -1.6
5,771,392 + +0.7
5,771,392 + BWI76_RS27815 0.45 -2.9
5,771,400 - BWI76_RS27815 0.45 -3.0
5,771,402 + BWI76_RS27815 0.45 -2.4
5,771,608 - BWI76_RS27815 0.57 -2.5

Or see this region's nucleotide sequence