Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27220 and BWI76_RS27225 are separated by 111 nucleotides BWI76_RS27225 and BWI76_RS27230 are separated by 245 nucleotides BWI76_RS27230 and BWI76_RS27235 are separated by 9 nucleotides
BWI76_RS27220: BWI76_RS27220 - glutaredoxin 3, at 5,649,722 to 5,649,973
_RS27220
BWI76_RS27225: BWI76_RS27225 - rhodanese-like domain-containing protein, at 5,650,085 to 5,650,516
_RS27225
BWI76_RS27230: BWI76_RS27230 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 5,650,762 to 5,652,306
_RS27230
BWI76_RS27235: BWI76_RS27235 - murein hydrolase activator EnvC, at 5,652,316 to 5,653,587
_RS27235
Position (kb) 5650
5651
5652
5653 Strain fitness (log2 ratio) -1
0
1 at 5649.898 kb on - strand, within BWI76_RS27220 at 5649.958 kb on - strand at 5650.117 kb on - strand at 5650.164 kb on - strand, within BWI76_RS27225 at 5650.175 kb on - strand, within BWI76_RS27225 at 5650.472 kb on + strand, within BWI76_RS27225 at 5650.561 kb on + strand at 5650.569 kb on - strand at 5650.686 kb on - strand at 5650.861 kb on + strand at 5650.957 kb on - strand, within BWI76_RS27230 at 5650.957 kb on - strand, within BWI76_RS27230 at 5650.965 kb on + strand, within BWI76_RS27230 at 5651.007 kb on - strand, within BWI76_RS27230 at 5651.048 kb on + strand, within BWI76_RS27230 at 5651.056 kb on - strand, within BWI76_RS27230 at 5651.061 kb on - strand, within BWI76_RS27230 at 5651.118 kb on - strand, within BWI76_RS27230 at 5651.289 kb on + strand, within BWI76_RS27230 at 5651.290 kb on + strand, within BWI76_RS27230 at 5651.362 kb on + strand, within BWI76_RS27230 at 5651.400 kb on + strand, within BWI76_RS27230 at 5651.502 kb on - strand, within BWI76_RS27230 at 5651.664 kb on + strand, within BWI76_RS27230 at 5651.672 kb on - strand, within BWI76_RS27230 at 5651.966 kb on + strand, within BWI76_RS27230 at 5652.030 kb on - strand, within BWI76_RS27230 at 5652.104 kb on - strand, within BWI76_RS27230 at 5652.135 kb on + strand, within BWI76_RS27230 at 5652.135 kb on + strand, within BWI76_RS27230 at 5652.143 kb on - strand, within BWI76_RS27230 at 5652.301 kb on + strand at 5652.320 kb on + strand at 5652.395 kb on - strand at 5652.406 kb on - strand at 5652.467 kb on - strand, within BWI76_RS27235 at 5652.528 kb on + strand, within BWI76_RS27235 at 5652.528 kb on + strand, within BWI76_RS27235 at 5652.536 kb on - strand, within BWI76_RS27235 at 5652.540 kb on + strand, within BWI76_RS27235 at 5652.540 kb on + strand, within BWI76_RS27235 at 5652.546 kb on + strand, within BWI76_RS27235 at 5652.782 kb on - strand, within BWI76_RS27235 at 5652.842 kb on + strand, within BWI76_RS27235 at 5652.929 kb on - strand, within BWI76_RS27235 at 5653.100 kb on + strand, within BWI76_RS27235 at 5653.122 kb on + strand, within BWI76_RS27235 at 5653.148 kb on + strand, within BWI76_RS27235 at 5653.204 kb on - strand, within BWI76_RS27235 at 5653.266 kb on + strand, within BWI76_RS27235 at 5653.272 kb on + strand, within BWI76_RS27235
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 5,649,898 - BWI76_RS27220 0.70 +0.9 5,649,958 - +0.1 5,650,117 - -0.3 5,650,164 - BWI76_RS27225 0.18 +0.5 5,650,175 - BWI76_RS27225 0.21 -0.6 5,650,472 + BWI76_RS27225 0.90 +0.5 5,650,561 + +1.4 5,650,569 - +0.0 5,650,686 - -0.2 5,650,861 + +0.4 5,650,957 - BWI76_RS27230 0.13 +1.2 5,650,957 - BWI76_RS27230 0.13 -0.2 5,650,965 + BWI76_RS27230 0.13 +0.3 5,651,007 - BWI76_RS27230 0.16 -0.8 5,651,048 + BWI76_RS27230 0.19 +0.6 5,651,056 - BWI76_RS27230 0.19 +0.1 5,651,061 - BWI76_RS27230 0.19 -0.9 5,651,118 - BWI76_RS27230 0.23 +0.1 5,651,289 + BWI76_RS27230 0.34 -0.5 5,651,290 + BWI76_RS27230 0.34 -0.1 5,651,362 + BWI76_RS27230 0.39 +0.4 5,651,400 + BWI76_RS27230 0.41 +0.3 5,651,502 - BWI76_RS27230 0.48 +0.1 5,651,664 + BWI76_RS27230 0.58 -0.0 5,651,672 - BWI76_RS27230 0.59 +0.1 5,651,966 + BWI76_RS27230 0.78 +0.4 5,652,030 - BWI76_RS27230 0.82 -0.5 5,652,104 - BWI76_RS27230 0.87 +1.1 5,652,135 + BWI76_RS27230 0.89 +1.4 5,652,135 + BWI76_RS27230 0.89 +0.4 5,652,143 - BWI76_RS27230 0.89 -0.6 5,652,301 + +0.6 5,652,320 + +0.3 5,652,395 - +0.2 5,652,406 - +0.8 5,652,467 - BWI76_RS27235 0.12 +0.2 5,652,528 + BWI76_RS27235 0.17 -0.5 5,652,528 + BWI76_RS27235 0.17 +0.2 5,652,536 - BWI76_RS27235 0.17 -0.4 5,652,540 + BWI76_RS27235 0.18 -0.2 5,652,540 + BWI76_RS27235 0.18 -0.5 5,652,546 + BWI76_RS27235 0.18 +0.3 5,652,782 - BWI76_RS27235 0.37 +1.0 5,652,842 + BWI76_RS27235 0.41 +0.3 5,652,929 - BWI76_RS27235 0.48 +0.1 5,653,100 + BWI76_RS27235 0.62 +0.8 5,653,122 + BWI76_RS27235 0.63 +0.4 5,653,148 + BWI76_RS27235 0.65 +1.7 5,653,204 - BWI76_RS27235 0.70 +0.9 5,653,266 + BWI76_RS27235 0.75 -0.4 5,653,272 + BWI76_RS27235 0.75 -0.4
Or see this region's nucleotide sequence